RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.6
CDH13-203ENST00000431540 NRXN2Q9P2S2 1712 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 ZPR1O75312 459 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 FCHSD2O94868 740 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 DPEP1P16444 411 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
CDH13-203ENST00000431540 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 TEX13AQ9BXU3 409 aaPredicted RBP11.27□□□□□ -0.61
CDH13-203ENST00000431540 SLC52A2Q9HAB3 445 aa11.27□□□□□ -0.61
CDH13-203ENST00000431540 AFDNP55196 1824 aaKnown RBP11.27□□□□□ -0.61
CDH13-203ENST00000431540 DICER1Q9UPY3 1922 aaKnown RBP11.27□□□□□ -0.61
CDH13-203ENST00000431540 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
CDH13-203ENST00000431540 TJP1Q07157 1748 aa11.26□□□□□ -0.61
CDH13-203ENST00000431540 SULT6B1Q6IMI4 303 aa11.26□□□□□ -0.61
CDH13-203ENST00000431540 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
CDH13-203ENST00000431540 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
CDH13-203ENST00000431540 DLEC1Q9Y238 1755 aa11.26□□□□□ -0.61
CDH13-203ENST00000431540 TNNT2P45379 298 aaPredicted RBP11.25□□□□□ -0.61
CDH13-203ENST00000431540 INTS5Q6P9B9 1019 aaKnown RBP11.25□□□□□ -0.61
CDH13-203ENST00000431540 A0A087WZG4 1122 aa11.24□□□□□ -0.61
CDH13-203ENST00000431540 PTCD1O75127 700 aaKnown RBP11.24□□□□□ -0.61
CDH13-203ENST00000431540 HSPA5P11021 654 aaKnown RBP11.24□□□□□ -0.61
CDH13-203ENST00000431540 DPY19L2Q6NUT2 758 aa11.24□□□□□ -0.61
CDH13-203ENST00000431540 SMIM5Q71RC9 77 aa11.24□□□□□ -0.61
CDH13-203ENST00000431540 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
CDH13-203ENST00000431540 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
CDH13-203ENST00000431540 MRC1P22897 1456 aa11.24□□□□□ -0.61
CDH13-203ENST00000431540 WDR90Q96KV7 1748 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 UBR2Q8IWV8 1755 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
CDH13-203ENST00000431540 CYP19A1P11511 503 aaPredicted RBP11.23□□□□□ -0.61
CDH13-203ENST00000431540 FKBP8Q14318 412 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 AMER1Q5JTC6 1135 aaPredicted RBP11.23□□□□□ -0.61
CDH13-203ENST00000431540 C9orf131Q5VYM1 1079 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
CDH13-203ENST00000431540 NPC1L1Q9UHC9 1359 aa11.23□□□□□ -0.61
CDH13-203ENST00000431540 RGL2O15211 777 aa11.22□□□□□ -0.61
CDH13-203ENST00000431540 RNMTO43148 476 aaKnown RBP11.22□□□□□ -0.61
CDH13-203ENST00000431540 STARD3NLO95772 234 aa11.22□□□□□ -0.61
CDH13-203ENST00000431540 SOS1Q07889 1333 aaPredicted RBP11.22□□□□□ -0.61
CDH13-203ENST00000431540 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
CDH13-203ENST00000431540 PER1O15534 1290 aaPredicted RBP11.21□□□□□ -0.61
CDH13-203ENST00000431540 LMNB1P20700 586 aa11.21□□□□□ -0.61
CDH13-203ENST00000431540 DDR1Q08345 913 aa11.21□□□□□ -0.61
CDH13-203ENST00000431540 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
CDH13-203ENST00000431540 GLTPD2A6NH11 291 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 G3V3G9 751 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 RIMBP2O15034 1052 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 DIAPH1O60610 1272 aaKnown RBP11.2□□□□□ -0.62
CDH13-203ENST00000431540 VEGFAP15692 232 aaPredicted RBP11.2□□□□□ -0.62
CDH13-203ENST00000431540 EIF5P55010 431 aaKnown RBP11.2□□□□□ -0.62
CDH13-203ENST00000431540 TTLL6Q8N841 843 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 SMC1BQ8NDV3 1235 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 POLR3GLQ9BT43 218 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 FER1L6Q2WGJ9 1857 aa11.2□□□□□ -0.62
CDH13-203ENST00000431540 SIPA1L3O60292 1781 aaPredicted RBP11.19□□□□□ -0.62
CDH13-203ENST00000431540 H0YIN7 160 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 SERPINB2P05120 415 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 LGR6Q9HBX8 967 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 RNF181Q9P0P0 153 aa11.19□□□□□ -0.62
CDH13-203ENST00000431540 COL15A1P39059 1388 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 PDE6BP35913 854 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 IL6STP40189 918 aaPredicted RBP11.18□□□□□ -0.62
CDH13-203ENST00000431540 PSEN1P49768 467 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 NFIXQ14938 502 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 BRIP1Q9BX63 1249 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 SRP68Q9UHB9 627 aaKnown RBP11.18□□□□□ -0.62
CDH13-203ENST00000431540 KCPQ6ZWJ8 1503 aa11.18□□□□□ -0.62
CDH13-203ENST00000431540 LTBP3Q9NS15 1303 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 GNAT3A8MTJ3 354 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 MTHFSDQ2M296 383 aaKnown RBP11.17□□□□□ -0.62
CDH13-203ENST00000431540 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 CLEC4GQ6UXB4 293 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 TTC5Q8N0Z6 440 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
CDH13-203ENST00000431540 ARFGEF2Q9Y6D5 1785 aa11.16□□□□□ -0.62
CDH13-203ENST00000431540 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
CDH13-203ENST00000431540 NPM2Q86SE8 214 aaKnown RBP11.16□□□□□ -0.62
CDH13-203ENST00000431540 PCGF6Q9BYE7 350 aa11.16□□□□□ -0.62
CDH13-203ENST00000431540 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
CDH13-203ENST00000431540 SCN4AP35499 1836 aa11.16□□□□□ -0.62
CDH13-203ENST00000431540 CHRNA5P30532 468 aa11.15□□□□□ -0.62
CDH13-203ENST00000431540 TEFQ10587 303 aa11.15□□□□□ -0.62
CDH13-203ENST00000431540 CNKSR1Q969H4 720 aa11.15□□□□□ -0.62
CDH13-203ENST00000431540 BCL2L12Q9HB09 334 aa11.15□□□□□ -0.62
CDH13-203ENST00000431540 HEG1Q9ULI3 1381 aa11.15□□□□□ -0.63
CDH13-203ENST00000431540 ANKRD31Q8N7Z5 1873 aa11.15□□□□□ -0.63
CDH13-203ENST00000431540 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
CDH13-203ENST00000431540 SLC39A6Q13433 755 aa11.14□□□□□ -0.63
CDH13-203ENST00000431540 FMNL2Q96PY5 1086 aa11.14□□□□□ -0.63
CDH13-203ENST00000431540 ZBTB1Q9Y2K1 713 aa11.14□□□□□ -0.63
CDH13-203ENST00000431540 CEMIPQ8WUJ3 1361 aa11.14□□□□□ -0.63
CDH13-203ENST00000431540 STYK1Q6J9G0 422 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms