RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 GCKRQ14397 625 aa20.59■□□□□ 0.89
USHBP1-203ENST00000431146 UBE2Q2Q8WVN8 375 aa20.59■□□□□ 0.89
USHBP1-203ENST00000431146 BICC1Q9H694 974 aaKnown RBP20.59■□□□□ 0.89
USHBP1-203ENST00000431146 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
USHBP1-203ENST00000431146 TTLL7Q6ZT98 887 aa20.58■□□□□ 0.89
USHBP1-203ENST00000431146 SYTL4Q96C24 671 aaPredicted RBP20.58■□□□□ 0.89
USHBP1-203ENST00000431146 PA2G4Q9UQ80 394 aaKnown RBP20.57■□□□□ 0.88
USHBP1-203ENST00000431146 UTYO14607 1347 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 MX1P20591 662 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 MTX1Q13505 466 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 RHPN1Q8TCX5 695 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
USHBP1-203ENST00000431146 ATG3Q9NT62 314 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 SPATA31A1Q5TZJ5 1347 aa20.57■□□□□ 0.88
USHBP1-203ENST00000431146 NUTM1Q86Y26 1132 aa20.56■□□□□ 0.88
USHBP1-203ENST00000431146 OSBPL3Q9H4L5 887 aa20.56■□□□□ 0.88
USHBP1-203ENST00000431146 CCDC9Q9Y3X0 531 aaKnown RBP20.56■□□□□ 0.88
USHBP1-203ENST00000431146 PLBD2Q8NHP8 589 aa20.56■□□□□ 0.88
USHBP1-203ENST00000431146 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
USHBP1-203ENST00000431146 OS9Q13438 667 aaPredicted RBP20.55■□□□□ 0.88
USHBP1-203ENST00000431146 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
USHBP1-203ENST00000431146 ERBB4Q15303 1308 aa20.55■□□□□ 0.88
USHBP1-203ENST00000431146 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
USHBP1-203ENST00000431146 EPHA10Q5JZY3 1008 aa20.54■□□□□ 0.88
USHBP1-203ENST00000431146 ZBTB3Q9H5J0 574 aa20.54■□□□□ 0.88
USHBP1-203ENST00000431146 A0A0G2JS52 829 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 BCL9O00512 1426 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 TUBGCP6Q96RT7 1819 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 UBE3BQ7Z3V4 1068 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 HDAC5Q9UQL6 1122 aa20.53■□□□□ 0.88
USHBP1-203ENST00000431146 NUP188Q5SRE5 1749 aa20.52■□□□□ 0.88
USHBP1-203ENST00000431146 PRIM1P49642 420 aaKnown RBP20.52■□□□□ 0.88
USHBP1-203ENST00000431146 DDB1Q16531 1140 aa20.52■□□□□ 0.88
USHBP1-203ENST00000431146 DOT1LQ8TEK3 1739 aa20.52■□□□□ 0.88
USHBP1-203ENST00000431146 NBR1Q14596 966 aa20.51■□□□□ 0.87
USHBP1-203ENST00000431146 KLHDC4Q8TBB5 520 aa20.51■□□□□ 0.87
USHBP1-203ENST00000431146 A0A087WZG4 1122 aa20.51■□□□□ 0.87
USHBP1-203ENST00000431146 RTL5Q5HYW3 569 aaPredicted RBP20.51■□□□□ 0.87
USHBP1-203ENST00000431146 SPATA31A5Q5VU36 1347 aa20.51■□□□□ 0.87
USHBP1-203ENST00000431146 SPATA31A7Q8IWB4 1347 aa20.51■□□□□ 0.87
USHBP1-203ENST00000431146 RBM25P49756 843 aaKnown RBP20.5■□□□□ 0.87
USHBP1-203ENST00000431146 SLC4A9Q96Q91 983 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 SLIT2O94813 1529 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 HSP90AB4PQ58FF6 505 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 ACSBG1Q96GR2 724 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 SIL1Q9H173 461 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 STAP2Q9UGK3 403 aa20.5■□□□□ 0.87
USHBP1-203ENST00000431146 LRP6O75581 1613 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 BECN1Q14457 450 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 C8orf37Q96NL8 207 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 TBC1D2Q9BYX2 928 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 THRAP3Q9Y2W1 955 aaKnown RBP20.49■□□□□ 0.87
USHBP1-203ENST00000431146 NWD2Q9ULI1 1742 aa20.49■□□□□ 0.87
USHBP1-203ENST00000431146 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.48■□□□□ 0.87
USHBP1-203ENST00000431146 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
USHBP1-203ENST00000431146 UNC5CLQ8IV45 518 aa20.48■□□□□ 0.87
USHBP1-203ENST00000431146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
USHBP1-203ENST00000431146 MAP4K4O95819 1239 aaPredicted RBP20.48■□□□□ 0.87
USHBP1-203ENST00000431146 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
USHBP1-203ENST00000431146 ARXQ96QS3 562 aa20.48■□□□□ 0.87
USHBP1-203ENST00000431146 CDCA7Q9BWT1 371 aaPredicted RBP20.48■□□□□ 0.87
USHBP1-203ENST00000431146 MARCH10Q8NA82 808 aaPredicted RBP20.47■□□□□ 0.87
USHBP1-203ENST00000431146 EIF5BO60841 1220 aaKnown RBP20.47■□□□□ 0.87
USHBP1-203ENST00000431146 STARD3NLO95772 234 aa20.46■□□□□ 0.87
USHBP1-203ENST00000431146 CASC1Q6TDU7 716 aa20.46■□□□□ 0.87
USHBP1-203ENST00000431146 TEX13AQ9BXU3 409 aaPredicted RBP20.46■□□□□ 0.87
USHBP1-203ENST00000431146 CASP7P55210 303 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 PI4K2BQ8TCG2 481 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 KIF2CQ99661 725 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 TJP1Q07157 1748 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 SASH1O94885 1247 aa20.45■□□□□ 0.86
USHBP1-203ENST00000431146 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
USHBP1-203ENST00000431146 CWC25Q9NXE8 425 aaPredicted RBP20.45■□□□□ 0.86
USHBP1-203ENST00000431146 CLASRPQ8N2M8 674 aaKnown RBP20.44■□□□□ 0.86
USHBP1-203ENST00000431146 AK9Q5TCS8 1911 aa20.44■□□□□ 0.86
USHBP1-203ENST00000431146 FAM98CQ17RN3 349 aaKnown RBP20.44■□□□□ 0.86
USHBP1-203ENST00000431146 AOX1Q06278 1338 aa20.43■□□□□ 0.86
USHBP1-203ENST00000431146 CYP19A1P11511 503 aaPredicted RBP20.43■□□□□ 0.86
USHBP1-203ENST00000431146 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
USHBP1-203ENST00000431146 SPRYD3Q8NCJ5 442 aa20.43■□□□□ 0.86
USHBP1-203ENST00000431146 JCADQ9P266 1359 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 H7C1W4 665 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 USP26Q9BXU7 913 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 SLKQ9H2G2 1235 aaPredicted RBP20.42■□□□□ 0.86
USHBP1-203ENST00000431146 BARGINQ6ZT62 677 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 AACSQ86V21 672 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 ZBTB1Q9Y2K1 713 aa20.42■□□□□ 0.86
USHBP1-203ENST00000431146 RFX5P48382 616 aaPredicted RBP20.41■□□□□ 0.86
USHBP1-203ENST00000431146 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
USHBP1-203ENST00000431146 LMBR1LQ6UX01 489 aa20.41■□□□□ 0.86
USHBP1-203ENST00000431146 ANO8Q9HCE9 1232 aaPredicted RBP20.41■□□□□ 0.86
USHBP1-203ENST00000431146 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
USHBP1-203ENST00000431146 BCL9LQ86UU0 1499 aa20.41■□□□□ 0.86
USHBP1-203ENST00000431146 IFIT2P09913 472 aaKnown RBP20.41■□□□□ 0.86
USHBP1-203ENST00000431146 KIF6Q6ZMV9 814 aa20.41■□□□□ 0.86
USHBP1-203ENST00000431146 CCDC191Q8NCU4 936 aa20.41■□□□□ 0.86
USHBP1-203ENST00000431146 ERC2O15083 957 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms