RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 ANXA1P04083 346 aa12.23□□□□□ -0.45
SMARCAL1-207ENST00000430374 TTLL7Q6ZT98 887 aa12.23□□□□□ -0.45
SMARCAL1-207ENST00000430374 ARXQ96QS3 562 aa12.23□□□□□ -0.45
SMARCAL1-207ENST00000430374 DDR1Q08345 913 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 NFIXQ14938 502 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 KIF6Q6ZMV9 814 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 XAGE3Q8WTP9 111 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 ZNF652Q9Y2D9 606 aa12.22□□□□□ -0.45
SMARCAL1-207ENST00000430374 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 HLFQ16534 295 aa12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 TBC1D9BQ66K14 1250 aa12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 SCN7AQ01118 1682 aa12.21□□□□□ -0.45
SMARCAL1-207ENST00000430374 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-207ENST00000430374 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
SMARCAL1-207ENST00000430374 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 GIGYF2Q6Y7W6 1299 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 ZBTB3Q9H5J0 574 aa12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 PHAXQ9H814 394 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
SMARCAL1-207ENST00000430374 CARMIL3Q8ND23 1372 aa12.18□□□□□ -0.46
SMARCAL1-207ENST00000430374 AIMP1Q12904 312 aaKnown RBP12.18□□□□□ -0.46
SMARCAL1-207ENST00000430374 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
SMARCAL1-207ENST00000430374 FHDC1Q9C0D6 1143 aaPredicted RBP12.18□□□□□ -0.46
SMARCAL1-207ENST00000430374 CD2APQ9Y5K6 639 aa12.18□□□□□ -0.46
SMARCAL1-207ENST00000430374 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 SERPINB2P05120 415 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 HSP90AB3PQ58FF7 597 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 BICDL1Q6ZP65 573 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 ZNF34Q8IZ26 560 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 C10orf71Q711Q0 1435 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 BCORQ6W2J9 1755 aa12.17□□□□□ -0.46
SMARCAL1-207ENST00000430374 UBN2Q6ZU65 1347 aa12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 FLIIQ13045 1269 aa12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 G2E3Q7L622 706 aa12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 IBTKQ9P2D0 1353 aaPredicted RBP12.16□□□□□ -0.46
SMARCAL1-207ENST00000430374 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 TRIM28Q13263 835 aaKnown RBP12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 PARP10Q53GL7 1025 aa12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 KSR2Q6VAB6 950 aa12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 ADCY9O60503 1353 aa12.15□□□□□ -0.46
SMARCAL1-207ENST00000430374 PI4KAP2A4QPH2 592 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 PRR5LQ6MZQ0 368 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 RIC3Q7Z5B4 369 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 PI4KAP1Q8N8J0 262 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 ISCA1Q9BUE6 129 aa12.14□□□□□ -0.47
SMARCAL1-207ENST00000430374 GPTP24298 496 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 RARSP54136 660 aaKnown RBP12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 TGFB2P61812 414 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 FKBP5Q13451 457 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 TPTE2Q6XPS3 522 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 NLRP10Q86W26 655 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 METTL22Q9BUU2 404 aaPredicted RBP12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 NYXQ9GZU5 481 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 MAP3K2Q9Y2U5 619 aa12.13□□□□□ -0.47
SMARCAL1-207ENST00000430374 RNF123Q5XPI4 1314 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 NTSR2O95665 410 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 NLGN2Q8NFZ4 835 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 BRIP1Q9BX63 1249 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
SMARCAL1-207ENST00000430374 PTPRCP08575 1304 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 PXDNLA1KZ92 1463 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 ST5P78524 1137 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 KLHL34Q8N239 644 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 RIC1Q4ADV7 1423 aa12.11□□□□□ -0.47
SMARCAL1-207ENST00000430374 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 ATP5J2-PTCD1G3V325 749 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 IGKV5-2P06315 115 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 CCDC191Q8NCU4 936 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 MYD88Q99836 296 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 PDZRN3Q9UPQ7 1066 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 UTRNP46939 3433 aa12.1□□□□□ -0.47
SMARCAL1-207ENST00000430374 ABCC12Q96J65 1359 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 NPHP1O15259 732 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 KCNA3P22001 575 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 PDE6BP35913 854 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
SMARCAL1-207ENST00000430374 ERFEQ4G0M1 354 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms