RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
OPTN-208ENST00000430081 TMEM88BA6NKF7 163 aa13.83□□□□□ -0.2
OPTN-208ENST00000430081 EAPPQ56P03 285 aaPredicted RBP13.83□□□□□ -0.2
OPTN-208ENST00000430081 CCER1Q8TC90 406 aaPredicted RBP13.83□□□□□ -0.2
OPTN-208ENST00000430081 TIAM2Q8IVF5 1701 aa13.83□□□□□ -0.2
OPTN-208ENST00000430081 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.2
OPTN-208ENST00000430081 CC2D1BQ5T0F9 858 aaKnown RBP13.82□□□□□ -0.2
OPTN-208ENST00000430081 NBPF5PQ86XG9 351 aaPredicted RBP13.82□□□□□ -0.2
OPTN-208ENST00000430081 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
OPTN-208ENST00000430081 ZNF652Q9Y2D9 606 aa13.82□□□□□ -0.2
OPTN-208ENST00000430081 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
OPTN-208ENST00000430081 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
OPTN-208ENST00000430081 NPR1P16066 1061 aa13.81□□□□□ -0.2
OPTN-208ENST00000430081 VEGFBP49765 207 aa13.81□□□□□ -0.2
OPTN-208ENST00000430081 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
OPTN-208ENST00000430081 CLEC4GQ6UXB4 293 aa13.81□□□□□ -0.2
OPTN-208ENST00000430081 HACL1Q9UJ83 578 aa13.81□□□□□ -0.2
OPTN-208ENST00000430081 TPTE2Q6XPS3 522 aa13.8□□□□□ -0.2
OPTN-208ENST00000430081 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
OPTN-208ENST00000430081 ZNF277Q9NRM2 450 aaPredicted RBP13.8□□□□□ -0.2
OPTN-208ENST00000430081 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
OPTN-208ENST00000430081 EPHX2P34913 555 aa13.79□□□□□ -0.2
OPTN-208ENST00000430081 PNMA8AQ86V59 439 aaPredicted RBP13.79□□□□□ -0.2
OPTN-208ENST00000430081 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
OPTN-208ENST00000430081 KCNQ3O43525 872 aa13.78□□□□□ -0.2
OPTN-208ENST00000430081 ALDH1B1P30837 517 aa13.78□□□□□ -0.2
OPTN-208ENST00000430081 CNGB1Q14028 1251 aaPredicted RBP13.78□□□□□ -0.2
OPTN-208ENST00000430081 DEFB115Q30KQ5 88 aa13.78□□□□□ -0.2
OPTN-208ENST00000430081 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
OPTN-208ENST00000430081 USP16Q9Y5T5 823 aa13.78□□□□□ -0.2
OPTN-208ENST00000430081 SNRPA1P09661 255 aaKnown RBP13.77□□□□□ -0.21
OPTN-208ENST00000430081 GTF2E1P29083 439 aaPredicted RBP13.77□□□□□ -0.21
OPTN-208ENST00000430081 PIP4K2AP48426 406 aaPredicted RBP13.77□□□□□ -0.21
OPTN-208ENST00000430081 LBX1P52954 281 aa13.77□□□□□ -0.21
OPTN-208ENST00000430081 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
OPTN-208ENST00000430081 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
OPTN-208ENST00000430081 SYNE4Q8N205 404 aa13.77□□□□□ -0.21
OPTN-208ENST00000430081 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.21
OPTN-208ENST00000430081 NIP7Q9Y221 180 aaKnown RBP eCLIP13.77□□□□□ -0.21
OPTN-208ENST00000430081 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
OPTN-208ENST00000430081 PER1O15534 1290 aaPredicted RBP13.76□□□□□ -0.21
OPTN-208ENST00000430081 IARSP41252 1262 aaKnown RBP13.76□□□□□ -0.21
OPTN-208ENST00000430081 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
OPTN-208ENST00000430081 JDP2Q8WYK2 163 aa13.76□□□□□ -0.21
OPTN-208ENST00000430081 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
OPTN-208ENST00000430081 ABT1Q9ULW3 272 aaKnown RBP13.76□□□□□ -0.21
OPTN-208ENST00000430081 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 KLRG2A4D1S0 409 aaPredicted RBP13.75□□□□□ -0.21
OPTN-208ENST00000430081 RASSF10A6NK89 507 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
OPTN-208ENST00000430081 FER1L6Q2WGJ9 1857 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 ANKRD31Q8N7Z5 1873 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
OPTN-208ENST00000430081 CCDC88AQ3V6T2 1871 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 RNF123Q5XPI4 1314 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 WDR33Q9C0J8 1336 aaKnown RBP13.74□□□□□ -0.21
OPTN-208ENST00000430081 COL11A2P13942 1736 aaPredicted RBP13.74□□□□□ -0.21
OPTN-208ENST00000430081 FZD9O00144 591 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 RGL2O15211 777 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 LMOD1P29536 600 aaPredicted RBP13.74□□□□□ -0.21
OPTN-208ENST00000430081 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 EIF6P56537 245 aaKnown RBP13.74□□□□□ -0.21
OPTN-208ENST00000430081 OLFM4Q6UX06 510 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 GPC2Q8N158 579 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 CFAP53Q96M91 514 aa13.74□□□□□ -0.21
OPTN-208ENST00000430081 PRAMEF22A3QJZ6 481 aa13.73□□□□□ -0.21
OPTN-208ENST00000430081 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
OPTN-208ENST00000430081 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
OPTN-208ENST00000430081 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
OPTN-208ENST00000430081 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
OPTN-208ENST00000430081 SLX4Q8IY92 1834 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 CC2D2BQ6DHV5 1058 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
OPTN-208ENST00000430081 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 PSMD1Q99460 953 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 BEGAINQ9BUH8 593 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 NYXQ9GZU5 481 aa13.72□□□□□ -0.21
OPTN-208ENST00000430081 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
OPTN-208ENST00000430081 ECE1P42892 770 aa13.71□□□□□ -0.21
OPTN-208ENST00000430081 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
OPTN-208ENST00000430081 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
OPTN-208ENST00000430081 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 HLFQ16534 295 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 GRIPAP1Q4V328 841 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 NBPF10Q6P3W6 841 aaKnown RBP13.7□□□□□ -0.22
OPTN-208ENST00000430081 MCM10Q7L590 875 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 RPGRQ92834 1020 aaKnown RBP13.7□□□□□ -0.22
OPTN-208ENST00000430081 NPC1L1Q9UHC9 1359 aa13.7□□□□□ -0.22
OPTN-208ENST00000430081 SCN4AP35499 1836 aa13.69□□□□□ -0.22
OPTN-208ENST00000430081 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
OPTN-208ENST00000430081 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
OPTN-208ENST00000430081 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
OPTN-208ENST00000430081 GRM1Q13255 1194 aa13.69□□□□□ -0.22
OPTN-208ENST00000430081 LARGE2Q8N3Y3 721 aa13.69□□□□□ -0.22
OPTN-208ENST00000430081 NGEFQ8N5V2 710 aa13.69□□□□□ -0.22
OPTN-208ENST00000430081 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
OPTN-208ENST00000430081 CCDC85CA6NKD9 419 aa13.68□□□□□ -0.22
OPTN-208ENST00000430081 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms