RNA–Protein interactions for RNA: ENST00000429958.5

SFTPA1-204, Transcript of surfactant protein A1, humanhuman

TSL 1 (best)

Gene SFTPA1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-204ENST00000429958 HLFQ16534 295 aa15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 NBPF5PQ86XG9 351 aaPredicted RBP15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 C16orf71Q8IYS4 520 aaPredicted RBP15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 C7orf43Q8WVR3 580 aa15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 MASTLQ96GX5 879 aa15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 ZNF652Q9Y2D9 606 aa15.47■□□□□ 0.07
SFTPA1-204ENST00000429958 POTECB2RU33 542 aa15.46■□□□□ 0.07
SFTPA1-204ENST00000429958 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
SFTPA1-204ENST00000429958 TPTE2Q6XPS3 522 aa15.46■□□□□ 0.07
SFTPA1-204ENST00000429958 THUMPD2Q9BTF0 503 aaKnown RBP15.46■□□□□ 0.07
SFTPA1-204ENST00000429958 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
SFTPA1-204ENST00000429958 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SFTPA1-204ENST00000429958 NIP7Q9Y221 180 aaKnown RBP eCLIP15.45■□□□□ 0.06
SFTPA1-204ENST00000429958 CEP350Q5VT06 3117 aa15.45■□□□□ 0.06
SFTPA1-204ENST00000429958 LTBP3Q9NS15 1303 aa15.44■□□□□ 0.06
SFTPA1-204ENST00000429958 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
SFTPA1-204ENST00000429958 NPHP1O15259 732 aa15.44■□□□□ 0.06
SFTPA1-204ENST00000429958 PRPF40BQ6NWY9 871 aaKnown RBP15.44■□□□□ 0.06
SFTPA1-204ENST00000429958 SCN7AQ01118 1682 aa15.44■□□□□ 0.06
SFTPA1-204ENST00000429958 NPR1P16066 1061 aa15.43■□□□□ 0.06
SFTPA1-204ENST00000429958 DPY19L2Q6NUT2 758 aa15.43■□□□□ 0.06
SFTPA1-204ENST00000429958 SBF1O95248 1867 aa15.43■□□□□ 0.06
SFTPA1-204ENST00000429958 ANKRD31Q8N7Z5 1873 aa15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 DLEC1Q9Y238 1755 aa15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 ERFEQ4G0M1 354 aa15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 TTLL7Q6ZT98 887 aa15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 SMC1BQ8NDV3 1235 aa15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 RRP7AQ9Y3A4 280 aaKnown RBP15.42■□□□□ 0.06
SFTPA1-204ENST00000429958 RIPK4P57078 832 aa15.41■□□□□ 0.06
SFTPA1-204ENST00000429958 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
SFTPA1-204ENST00000429958 NGEFQ8N5V2 710 aa15.41■□□□□ 0.06
SFTPA1-204ENST00000429958 TAOK3Q9H2K8 898 aa15.41■□□□□ 0.06
SFTPA1-204ENST00000429958 MAP3K15Q6ZN16 1313 aa15.41■□□□□ 0.06
SFTPA1-204ENST00000429958 FAM177BA6PVY3 158 aa15.4■□□□□ 0.06
SFTPA1-204ENST00000429958 HTRA3P83110 453 aa15.4■□□□□ 0.06
SFTPA1-204ENST00000429958 DDX10Q13206 875 aaKnown RBP15.4■□□□□ 0.06
SFTPA1-204ENST00000429958 BABAM1Q9NWV8 329 aa15.4■□□□□ 0.06
SFTPA1-204ENST00000429958 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
SFTPA1-204ENST00000429958 ALDH1B1P30837 517 aa15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 TMPOP42166 694 aaKnown RBP15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 PDIA6Q15084 440 aa15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 IFFO2Q5TF58 517 aa15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 LRP10Q7Z4F1 713 aa15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 ZNF34Q8IZ26 560 aa15.39■□□□□ 0.05
SFTPA1-204ENST00000429958 MYL6BP14649 208 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 KLRG1Q96E93 195 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 TSPYL4Q9UJ04 414 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 BCORQ6W2J9 1755 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 ERBB4Q15303 1308 aa15.38■□□□□ 0.05
SFTPA1-204ENST00000429958 DDNO94850 711 aaPredicted RBP15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 CCDC93Q567U6 631 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 SUSD4Q5VX71 490 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 OLFM4Q6UX06 510 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 NUTM1Q86Y26 1132 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 JMYQ8N9B5 988 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 NYXQ9GZU5 481 aa15.37■□□□□ 0.05
SFTPA1-204ENST00000429958 SLX4Q8IY92 1834 aa15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 FKBP4Q02790 459 aaKnown RBP eCLIP15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 GIGYF2Q6Y7W6 1299 aaKnown RBP15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 KIF6Q6ZMV9 814 aa15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 RTKN2Q8IZC4 609 aa15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 ZBTB3Q9H5J0 574 aa15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 COL11A2P13942 1736 aaPredicted RBP15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 UBN2Q6ZU65 1347 aa15.36■□□□□ 0.05
SFTPA1-204ENST00000429958 CHL1O00533 1208 aa15.35■□□□□ 0.05
SFTPA1-204ENST00000429958 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
SFTPA1-204ENST00000429958 FER1L6Q2WGJ9 1857 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 EIF2S2P20042 333 aaKnown RBP15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 GPTP24298 496 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 LMOD3Q0VAK6 560 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 SYNE4Q8N205 404 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 TRIM35Q9UPQ4 493 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 TNRC6CQ9HCJ0 1690 aaKnown RBP15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
SFTPA1-204ENST00000429958 NTSR2O95665 410 aa15.33■□□□□ 0.04
SFTPA1-204ENST00000429958 PROSER3Q2NL68 480 aa15.33■□□□□ 0.04
SFTPA1-204ENST00000429958 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
SFTPA1-204ENST00000429958 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.04
SFTPA1-204ENST00000429958 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
SFTPA1-204ENST00000429958 WDR90Q96KV7 1748 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 FZD9O00144 591 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 ANXA1P04083 346 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 POTEIP0CG38 1075 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 POTEJP0CG39 1038 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 CCDC146Q8IYE0 955 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 RUNDC1Q96C34 613 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 PSMD1Q99460 953 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 ADAMTS8Q9UP79 889 aa15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
SFTPA1-204ENST00000429958 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
SFTPA1-204ENST00000429958 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
SFTPA1-204ENST00000429958 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms