RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TAF7Q15545 349 aaPredicted RBP19.78■□□□□ 0.76
MSH5-208ENST00000429846 CNKSR1Q969H4 720 aa19.78■□□□□ 0.76
MSH5-208ENST00000429846 RRAGCQ9HB90 399 aa19.78■□□□□ 0.76
MSH5-208ENST00000429846 PRAMEF22A3QJZ6 481 aa19.77■□□□□ 0.76
MSH5-208ENST00000429846 PRELPP51888 382 aa19.77■□□□□ 0.76
MSH5-208ENST00000429846 DCTN1Q14203 1278 aa19.77■□□□□ 0.76
MSH5-208ENST00000429846 STYK1Q6J9G0 422 aa19.77■□□□□ 0.76
MSH5-208ENST00000429846 LTBP3Q9NS15 1303 aa19.76■□□□□ 0.75
MSH5-208ENST00000429846 SOGA3Q5TF21 947 aa19.76■□□□□ 0.75
MSH5-208ENST00000429846 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
MSH5-208ENST00000429846 SLX4Q8IY92 1834 aa19.76■□□□□ 0.75
MSH5-208ENST00000429846 SRGNP10124 158 aa19.75■□□□□ 0.75
MSH5-208ENST00000429846 PIP4K2AP48426 406 aaPredicted RBP19.75■□□□□ 0.75
MSH5-208ENST00000429846 NBPF5PQ86XG9 351 aaPredicted RBP19.75■□□□□ 0.75
MSH5-208ENST00000429846 SMC1BQ8NDV3 1235 aa19.75■□□□□ 0.75
MSH5-208ENST00000429846 MASTLQ96GX5 879 aa19.75■□□□□ 0.75
MSH5-208ENST00000429846 C21orf2O43822 256 aa19.74■□□□□ 0.75
MSH5-208ENST00000429846 VEGFAP15692 232 aaPredicted RBP19.74■□□□□ 0.75
MSH5-208ENST00000429846 CCDC24Q8N4L8 307 aa19.74■□□□□ 0.75
MSH5-208ENST00000429846 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
MSH5-208ENST00000429846 NBPF26B4DH59 902 aa19.73■□□□□ 0.75
MSH5-208ENST00000429846 DPY19L2Q6NUT2 758 aa19.73■□□□□ 0.75
MSH5-208ENST00000429846 NBPF10Q6P3W6 841 aaKnown RBP19.73■□□□□ 0.75
MSH5-208ENST00000429846 NBPF15Q8N660 670 aa19.73■□□□□ 0.75
MSH5-208ENST00000429846 DNAJC5GQ8N7S2 189 aa19.73■□□□□ 0.75
MSH5-208ENST00000429846 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
MSH5-208ENST00000429846 IFFO2Q5TF58 517 aa19.72■□□□□ 0.75
MSH5-208ENST00000429846 PRPF40BQ6NWY9 871 aaKnown RBP19.72■□□□□ 0.75
MSH5-208ENST00000429846 PLEKHF1Q96S99 279 aa19.72■□□□□ 0.75
MSH5-208ENST00000429846 ERFEQ4G0M1 354 aa19.71■□□□□ 0.75
MSH5-208ENST00000429846 TPTE2Q6XPS3 522 aa19.71■□□□□ 0.75
MSH5-208ENST00000429846 NIP7Q9Y221 180 aaKnown RBP eCLIP19.71■□□□□ 0.75
MSH5-208ENST00000429846 MAPK8IP3Q9UPT6 1336 aa19.71■□□□□ 0.75
MSH5-208ENST00000429846 NFE2L2Q16236 605 aa19.7■□□□□ 0.74
MSH5-208ENST00000429846 ZNF219Q9P2Y4 722 aaPredicted RBP19.7■□□□□ 0.74
MSH5-208ENST00000429846 NUP98P52948 1817 aa19.69■□□□□ 0.74
MSH5-208ENST00000429846 KLRG2A4D1S0 409 aaPredicted RBP19.69■□□□□ 0.74
MSH5-208ENST00000429846 NPR1P16066 1061 aa19.69■□□□□ 0.74
MSH5-208ENST00000429846 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
MSH5-208ENST00000429846 ERVV-1B6SEH8 477 aa19.67■□□□□ 0.74
MSH5-208ENST00000429846 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
MSH5-208ENST00000429846 KLRG1Q96E93 195 aa19.67■□□□□ 0.74
MSH5-208ENST00000429846 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
MSH5-208ENST00000429846 RALBP1Q15311 655 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 HLFQ16534 295 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 C7orf43Q8WVR3 580 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 NYXQ9GZU5 481 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 MAP3K15Q6ZN16 1313 aa19.65■□□□□ 0.74
MSH5-208ENST00000429846 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
MSH5-208ENST00000429846 POTECB2RU33 542 aa19.64■□□□□ 0.73
MSH5-208ENST00000429846 GTF2E1P29083 439 aaPredicted RBP19.64■□□□□ 0.73
MSH5-208ENST00000429846 KIF6Q6ZMV9 814 aa19.64■□□□□ 0.73
MSH5-208ENST00000429846 JMYQ8N9B5 988 aa19.64■□□□□ 0.73
MSH5-208ENST00000429846 RIC1Q4ADV7 1423 aa19.64■□□□□ 0.73
MSH5-208ENST00000429846 SCN4AP35499 1836 aa19.64■□□□□ 0.73
MSH5-208ENST00000429846 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
MSH5-208ENST00000429846 HTRA3P83110 453 aa19.63■□□□□ 0.73
MSH5-208ENST00000429846 THUMPD2Q9BTF0 503 aaKnown RBP19.63■□□□□ 0.73
MSH5-208ENST00000429846 FKBP4Q02790 459 aaKnown RBP eCLIP19.62■□□□□ 0.73
MSH5-208ENST00000429846 RTKN2Q8IZC4 609 aa19.62■□□□□ 0.73
MSH5-208ENST00000429846 FAM177BA6PVY3 158 aa19.61■□□□□ 0.73
MSH5-208ENST00000429846 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
MSH5-208ENST00000429846 CRY2Q49AN0 593 aa19.61■□□□□ 0.73
MSH5-208ENST00000429846 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
MSH5-208ENST00000429846 BABAM1Q9NWV8 329 aa19.61■□□□□ 0.73
MSH5-208ENST00000429846 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
MSH5-208ENST00000429846 ABCC12Q96J65 1359 aa19.6■□□□□ 0.73
MSH5-208ENST00000429846 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
MSH5-208ENST00000429846 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
MSH5-208ENST00000429846 DDNO94850 711 aaPredicted RBP19.59■□□□□ 0.73
MSH5-208ENST00000429846 MYL6BP14649 208 aa19.59■□□□□ 0.73
MSH5-208ENST00000429846 L3MBTL3Q96JM7 780 aaPredicted RBP19.59■□□□□ 0.73
MSH5-208ENST00000429846 RIPK4P57078 832 aa19.58■□□□□ 0.72
MSH5-208ENST00000429846 GIGYF2Q6Y7W6 1299 aaKnown RBP19.58■□□□□ 0.72
MSH5-208ENST00000429846 TTLL7Q6ZT98 887 aa19.58■□□□□ 0.72
MSH5-208ENST00000429846 SNED1Q8TER0 1413 aa19.58■□□□□ 0.72
MSH5-208ENST00000429846 UBN2Q6ZU65 1347 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 CC2D2BQ6DHV5 1058 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 CHADLQ6NUI6 762 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 NUTM1Q86Y26 1132 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 ZBTB3Q9H5J0 574 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 ANKRD36CQ5JPF3 1778 aa19.57■□□□□ 0.72
MSH5-208ENST00000429846 MYBBP1AQ9BQG0 1328 aaKnown RBP19.56■□□□□ 0.72
MSH5-208ENST00000429846 ZNF34Q8IZ26 560 aa19.56■□□□□ 0.72
MSH5-208ENST00000429846 PSMD1Q99460 953 aa19.56■□□□□ 0.72
MSH5-208ENST00000429846 ZNF277Q9NRM2 450 aaPredicted RBP19.56■□□□□ 0.72
MSH5-208ENST00000429846 HOXA10P31260 410 aaPredicted RBP19.55■□□□□ 0.72
MSH5-208ENST00000429846 IARSP41252 1262 aaKnown RBP19.55■□□□□ 0.72
MSH5-208ENST00000429846 TMPOP42166 694 aaKnown RBP19.55■□□□□ 0.72
MSH5-208ENST00000429846 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
MSH5-208ENST00000429846 PARP10Q53GL7 1025 aa19.55■□□□□ 0.72
MSH5-208ENST00000429846 PPP1R42Q7Z4L9 355 aa19.55■□□□□ 0.72
MSH5-208ENST00000429846 RPGRQ92834 1020 aaKnown RBP19.55■□□□□ 0.72
MSH5-208ENST00000429846 GPTP24298 496 aa19.54■□□□□ 0.72
MSH5-208ENST00000429846 OLFM4Q6UX06 510 aa19.54■□□□□ 0.72
MSH5-208ENST00000429846 NTSR2O95665 410 aa19.53■□□□□ 0.72
MSH5-208ENST00000429846 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
MSH5-208ENST00000429846 LRP10Q7Z4F1 713 aa19.53■□□□□ 0.72
MSH5-208ENST00000429846 LDHDQ86WU2 507 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms