RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 INTS3Q68E01 1043 aaKnown RBP10.77□□□□□ -0.68
GABPB1-205ENST00000429662 RPAP2Q8IXW5 612 aaPredicted RBP10.77□□□□□ -0.68
GABPB1-205ENST00000429662 DNAJC5GQ8N7S2 189 aa10.77□□□□□ -0.68
GABPB1-205ENST00000429662 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.68
GABPB1-205ENST00000429662 SLIT3O75094 1523 aa10.77□□□□□ -0.69
GABPB1-205ENST00000429662 HMOX1P09601 288 aa10.77□□□□□ -0.69
GABPB1-205ENST00000429662 MRE11P49959 708 aa10.77□□□□□ -0.69
GABPB1-205ENST00000429662 NLGN2Q8NFZ4 835 aa10.77□□□□□ -0.69
GABPB1-205ENST00000429662 DCTPP1Q9H773 170 aa10.77□□□□□ -0.69
GABPB1-205ENST00000429662 PTPRCP08575 1304 aa10.76□□□□□ -0.69
GABPB1-205ENST00000429662 ZNF827Q17R98 1081 aa10.76□□□□□ -0.69
GABPB1-205ENST00000429662 NME9Q86XW9 330 aa10.76□□□□□ -0.69
GABPB1-205ENST00000429662 OCEL1Q9H607 264 aa10.76□□□□□ -0.69
GABPB1-205ENST00000429662 EMILIN1Q9Y6C2 1016 aa10.76□□□□□ -0.69
GABPB1-205ENST00000429662 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
GABPB1-205ENST00000429662 K7ELQ4 463 aaPredicted RBP10.75□□□□□ -0.69
GABPB1-205ENST00000429662 RAB3GAP1Q15042 981 aa10.75□□□□□ -0.69
GABPB1-205ENST00000429662 CASC1Q6TDU7 716 aa10.75□□□□□ -0.69
GABPB1-205ENST00000429662 KLHL34Q8N239 644 aa10.75□□□□□ -0.69
GABPB1-205ENST00000429662 RTN4Q9NQC3 1192 aaKnown RBP10.75□□□□□ -0.69
GABPB1-205ENST00000429662 MON2Q7Z3U7 1717 aa10.75□□□□□ -0.69
GABPB1-205ENST00000429662 TTC21BQ7Z4L5 1316 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 PLEKHG3A1L390 1219 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 GOLGA6L22H0YM25 854 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 CHL1O00533 1208 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 RABEP1Q15276 862 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 GPR162Q16538 588 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 CLEC17AQ6ZS10 378 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 TSPYL6Q8N831 410 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 ANKRD44Q8N8A2 993 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 STK32BQ9NY57 414 aa10.74□□□□□ -0.69
GABPB1-205ENST00000429662 MAP2P11137 1827 aaKnown RBP10.73□□□□□ -0.69
GABPB1-205ENST00000429662 ABCC6O95255 1503 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 PIK3C2AO00443 1686 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 ST18O60284 1047 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 HMMRO75330 724 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 SLC34A2O95436 690 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 HSP90AA1P07900 732 aaKnown RBP10.73□□□□□ -0.69
GABPB1-205ENST00000429662 COL13A1Q5TAT6 717 aaPredicted RBP10.73□□□□□ -0.69
GABPB1-205ENST00000429662 NUTM2GQ5VZR2 741 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 C8orf58Q8NAV2 365 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 LY75O60449 1722 aa10.73□□□□□ -0.69
GABPB1-205ENST00000429662 SIRT2Q8IXJ6 389 aa10.72□□□□□ -0.69
GABPB1-205ENST00000429662 SPRYD3Q8NCJ5 442 aa10.72□□□□□ -0.69
GABPB1-205ENST00000429662 KIF2CQ99661 725 aa10.72□□□□□ -0.69
GABPB1-205ENST00000429662 CICQ96RK0 1608 aaPredicted RBP10.72□□□□□ -0.69
GABPB1-205ENST00000429662 SOS1Q07889 1333 aaPredicted RBP10.72□□□□□ -0.69
GABPB1-205ENST00000429662 KIF3CO14782 793 aa10.71□□□□□ -0.69
GABPB1-205ENST00000429662 XRCC6P12956 609 aaKnown RBP eCLIP10.71□□□□□ -0.69
GABPB1-205ENST00000429662 NUCB2P80303 420 aa10.71□□□□□ -0.69
GABPB1-205ENST00000429662 TTC22Q5TAA0 569 aa10.71□□□□□ -0.69
GABPB1-205ENST00000429662 PLEKHM2Q8IWE5 1019 aa10.71□□□□□ -0.69
GABPB1-205ENST00000429662 TNPO1Q92973 898 aaKnown RBP10.71□□□□□ -0.69
GABPB1-205ENST00000429662 THUMPD2Q9BTF0 503 aaKnown RBP10.71□□□□□ -0.69
GABPB1-205ENST00000429662 CWC22Q9HCG8 908 aaKnown RBP10.71□□□□□ -0.69
GABPB1-205ENST00000429662 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
GABPB1-205ENST00000429662 TTC21AQ8NDW8 1320 aa10.71□□□□□ -0.7
GABPB1-205ENST00000429662 USP31Q70CQ4 1352 aa10.7□□□□□ -0.7
GABPB1-205ENST00000429662 TNS2Q63HR2 1409 aa10.7□□□□□ -0.7
GABPB1-205ENST00000429662 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
GABPB1-205ENST00000429662 EVA1CP58658 441 aa10.7□□□□□ -0.7
GABPB1-205ENST00000429662 EIF4A2Q14240 407 aaKnown RBP10.7□□□□□ -0.7
GABPB1-205ENST00000429662 DDB1Q16531 1140 aa10.7□□□□□ -0.7
GABPB1-205ENST00000429662 REC8O95072 547 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 FBLN1P23142 703 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 CCT4P50991 539 aaKnown RBP10.69□□□□□ -0.7
GABPB1-205ENST00000429662 SULT6B1Q6IMI4 303 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 CDAN1Q8IWY9 1227 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 NGDNQ8NEJ9 315 aaKnown RBP10.69□□□□□ -0.7
GABPB1-205ENST00000429662 C1orf115Q9H7X2 142 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 PNPLA7Q6ZV29 1317 aa10.69□□□□□ -0.7
GABPB1-205ENST00000429662 ELL2O00472 640 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-205ENST00000429662 RRS1Q15050 365 aaKnown RBP10.68□□□□□ -0.7
GABPB1-205ENST00000429662 CEP85Q6P2H3 762 aa10.68□□□□□ -0.7
GABPB1-205ENST00000429662 ZNF467Q7Z7K2 595 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-205ENST00000429662 PDCD7Q8N8D1 485 aaKnown RBP10.68□□□□□ -0.7
GABPB1-205ENST00000429662 GRPEL1Q9HAV7 217 aa10.68□□□□□ -0.7
GABPB1-205ENST00000429662 BABAM1Q9NWV8 329 aa10.68□□□□□ -0.7
GABPB1-205ENST00000429662 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
GABPB1-205ENST00000429662 IBTKQ9P2D0 1353 aaPredicted RBP10.68□□□□□ -0.7
GABPB1-205ENST00000429662 KIAA1551Q9HCM1 1747 aa10.68□□□□□ -0.7
GABPB1-205ENST00000429662 GCP02774 474 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 CHRM1P11229 460 aaPredicted RBP10.67□□□□□ -0.7
GABPB1-205ENST00000429662 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 RTF1Q92541 710 aaKnown RBP10.67□□□□□ -0.7
GABPB1-205ENST00000429662 USP26Q9BXU7 913 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 ACEP12821 1306 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 RTL1A6NKG5 1358 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 USP6P35125 1406 aa10.67□□□□□ -0.7
GABPB1-205ENST00000429662 EPB41L2O43491 1005 aaKnown RBP10.66□□□□□ -0.7
GABPB1-205ENST00000429662 GSPT1P15170 499 aaKnown RBP10.66□□□□□ -0.7
GABPB1-205ENST00000429662 MCM2P49736 904 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 PRELPP51888 382 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 WDR17Q8IZU2 1322 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 USP54Q70EL1 1684 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 TOGARAM1Q9Y4F4 1720 aa10.66□□□□□ -0.7
GABPB1-205ENST00000429662 CLCN1P35523 988 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms