RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 CCDC83Q8IWF9 413 aa17.61■□□□□ 0.41
MARK3-205ENST00000429436 RIMS1Q86UR5 1692 aaKnown RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 IBTKQ9P2D0 1353 aaPredicted RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 AK2P54819 239 aa17.61■□□□□ 0.41
MARK3-205ENST00000429436 FAM43BQ6ZT52 329 aaPredicted RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 MCM5P33992 734 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 USP6P35125 1406 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
MARK3-205ENST00000429436 EID1Q9Y6B2 187 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 SYAP1Q96A49 352 aaPredicted RBP17.6■□□□□ 0.41
MARK3-205ENST00000429436 DIAPH3Q9NSV4 1193 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 SMC3Q9UQE7 1217 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 FLT4P35916 1363 aa17.6■□□□□ 0.41
MARK3-205ENST00000429436 ADCY5O95622 1261 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 HMGN5P82970 282 aaKnown RBP17.59■□□□□ 0.41
MARK3-205ENST00000429436 MPRIPQ6WCQ1 1025 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 FERMT3Q86UX7 667 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 PRPF40BQ6NWY9 871 aaKnown RBP17.59■□□□□ 0.41
MARK3-205ENST00000429436 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 CUL4AQ13619 759 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 TNRQ92752 1358 aa17.59■□□□□ 0.41
MARK3-205ENST00000429436 WDR33Q9C0J8 1336 aaKnown RBP17.58■□□□□ 0.41
MARK3-205ENST00000429436 HOXC9P31274 260 aa17.58■□□□□ 0.41
MARK3-205ENST00000429436 CHAF1AQ13111 956 aaPredicted RBP17.58■□□□□ 0.41
MARK3-205ENST00000429436 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.41
MARK3-205ENST00000429436 SIL1Q9H173 461 aa17.58■□□□□ 0.41
MARK3-205ENST00000429436 SALL3Q9BXA9 1300 aa17.58■□□□□ 0.4
MARK3-205ENST00000429436 LARGE1O95461 756 aa17.58■□□□□ 0.4
MARK3-205ENST00000429436 JAKMIP1Q96N16 626 aaKnown RBP17.58■□□□□ 0.4
MARK3-205ENST00000429436 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.4
MARK3-205ENST00000429436 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
MARK3-205ENST00000429436 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
MARK3-205ENST00000429436 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
MARK3-205ENST00000429436 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
MARK3-205ENST00000429436 SYT1P21579 422 aa17.57■□□□□ 0.4
MARK3-205ENST00000429436 HSPA4P34932 840 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 PIBF1Q8WXW3 757 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 PRIMPOLQ96LW4 560 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 NPHP1O15259 732 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 TNNT1P13805 278 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 TEFQ10587 303 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 ADCK5Q3MIX3 580 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 OVOS2A0A0J9YW53 1432 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 OVOS2Q6IE36 1432 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 PTH1RQ03431 593 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 CWF19L2Q2TBE0 894 aaKnown RBP17.56■□□□□ 0.4
MARK3-205ENST00000429436 RUFY3Q7L099 469 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.56■□□□□ 0.4
MARK3-205ENST00000429436 PPP6R1Q9UPN7 881 aa17.56■□□□□ 0.4
MARK3-205ENST00000429436 V9GYY5 206 aaPredicted RBP17.56■□□□□ 0.4
MARK3-205ENST00000429436 CEP170BQ9Y4F5 1589 aaPredicted RBP17.55■□□□□ 0.4
MARK3-205ENST00000429436 RIMBP3CA6NJZ7 1639 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 RIMBP3BA6NNM3 1639 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 RIMBP3Q9UFD9 1639 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 STX6O43752 255 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 DNM1Q05193 864 aaKnown RBP17.55■□□□□ 0.4
MARK3-205ENST00000429436 ZNF592Q92610 1267 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 LOC102724159A0A0B4J2E5 919 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 SGSM2O43147 1006 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 ANAPC15P60006 121 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 PWP2Q15269 919 aaKnown RBP17.55■□□□□ 0.4
MARK3-205ENST00000429436 KIF1BPQ96EK5 621 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
MARK3-205ENST00000429436 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 STK3Q13188 491 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 INTS4Q96HW7 963 aaKnown RBP17.54■□□□□ 0.4
MARK3-205ENST00000429436 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
MARK3-205ENST00000429436 PYCARDQ9ULZ3 195 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 CAMK4Q16566 473 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 SSH3Q8TE77 659 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 STAP2Q9UGK3 403 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 IFIT2P09913 472 aaKnown RBP17.54■□□□□ 0.4
MARK3-205ENST00000429436 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
MARK3-205ENST00000429436 GJB2P29033 226 aa17.53■□□□□ 0.4
MARK3-205ENST00000429436 ZSCAN22P10073 491 aaPredicted RBP17.53■□□□□ 0.4
MARK3-205ENST00000429436 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
MARK3-205ENST00000429436 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
MARK3-205ENST00000429436 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
MARK3-205ENST00000429436 KLHDC4Q8TBB5 520 aa17.53■□□□□ 0.4
MARK3-205ENST00000429436 BTBD11A6QL63 1104 aa17.52■□□□□ 0.4
MARK3-205ENST00000429436 PHF14O94880 888 aa17.52■□□□□ 0.4
MARK3-205ENST00000429436 AACSQ86V21 672 aa17.52■□□□□ 0.4
MARK3-205ENST00000429436 C16orf45Q96MC5 204 aaPredicted RBP17.52■□□□□ 0.4
MARK3-205ENST00000429436 TCHHQ07283 1943 aa17.52■□□□□ 0.4
MARK3-205ENST00000429436 NBPF6Q5VWK0 638 aa17.52■□□□□ 0.39
MARK3-205ENST00000429436 NBPF4Q96M43 638 aa17.52■□□□□ 0.39
MARK3-205ENST00000429436 TMX1Q9H3N1 280 aa17.52■□□□□ 0.39
MARK3-205ENST00000429436 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.39
MARK3-205ENST00000429436 MAP3K5Q99683 1374 aa17.52■□□□□ 0.39
MARK3-205ENST00000429436 FOSBP53539 338 aa17.51■□□□□ 0.39
MARK3-205ENST00000429436 BANK1Q8NDB2 785 aa17.51■□□□□ 0.39
MARK3-205ENST00000429436 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.399e-7■□□□□ 9.6
MARK3-205ENST00000429436 SIRT1Q96EB6 747 aa17.51■□□□□ 0.39
MARK3-205ENST00000429436 PEAK1Q9H792 1746 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms