RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 PPIP5K1Q6PFW1 1433 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 STXBP4Q6ZWJ1 553 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 NPHP3Q7Z494 1330 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 FANCIQ9NVI1 1328 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 ANKRD36BQ8N2N9 1353 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 ANKRD18BA2A2Z9 1011 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-208ENST00000428599 RPAP2Q8IXW5 612 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-208ENST00000428599 RNF41Q9H4P4 317 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-208ENST00000428599 TTC21AQ8NDW8 1320 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 FBLN1P23142 703 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 USP8P40818 1118 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 CCDC102AQ96A19 550 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 LRRC45Q96CN5 670 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 CCDC113Q9H0I3 377 aa10.37□□□□□ -0.75
CTNND1-208ENST00000428599 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-208ENST00000428599 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 ZMYM3Q14202 1370 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 CCDC12Q8WUD4 166 aaPredicted RBP10.36□□□□□ -0.75
CTNND1-208ENST00000428599 NCKAP5LQ9HCH0 1330 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 IFIT5Q13325 482 aaKnown RBP10.36□□□□□ -0.75
CTNND1-208ENST00000428599 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 CCDC178Q5BJE1 867 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 SSH1Q8WYL5 1049 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 TSNARE1Q96NA8 513 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 GBP3Q9H0R5 595 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 RANBP6O60518 1105 aaKnown RBP10.36□□□□□ -0.75
CTNND1-208ENST00000428599 FERP16591 822 aa10.36□□□□□ -0.75
CTNND1-208ENST00000428599 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 EXOC6BQ9Y2D4 811 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 CFAP43Q8NDM7 1665 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 A0A087WZG4 1122 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 CEP63Q96MT8 703 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 TRMT112Q9UI30 125 aaKnown RBP10.35□□□□□ -0.75
CTNND1-208ENST00000428599 MACROD2A1Z1Q3 448 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 LDHCP07864 332 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 PSMD1Q99460 953 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 HLA-DOAP06340 250 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 LUZP1Q86V48 1076 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 DISP1Q96F81 1524 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 F6X3S4 739 aa10.35□□□□□ -0.75
CTNND1-208ENST00000428599 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 RAB11FIP3O75154 756 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 CRACR2AQ9BSW2 395 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 TAOK3Q9H2K8 898 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 SLC12A7Q9Y666 1083 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 SMC1AQ14683 1233 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 VTI1AQ96AJ9 217 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 GOPCQ9HD26 462 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 HYPKQ9NX55 129 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 CASTP20810 708 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 MRPS9P82933 396 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 IFFO1Q0D2I5 559 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 C16orf71Q8IYS4 520 aaPredicted RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 RARSP54136 660 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 NLRP5P59047 1200 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 DDX11Q96FC9 970 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.34□□□□□ -0.75
CTNND1-208ENST00000428599 MCM3P25205 808 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 CATIPQ7Z7H3 387 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 DNAAF4Q8WXU2 420 aa10.34□□□□□ -0.75
CTNND1-208ENST00000428599 CEP170Q5SW79 1584 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 USO1O60763 962 aaKnown RBP10.33□□□□□ -0.76
CTNND1-208ENST00000428599 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
CTNND1-208ENST00000428599 KIF1BPQ96EK5 621 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 ZBTB3Q9H5J0 574 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 RALGAPBQ86X10 1494 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 FAM83GA6ND36 823 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 HMGB1P09429 215 aaKnown RBP10.33□□□□□ -0.76
CTNND1-208ENST00000428599 AMPD3Q01432 767 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 CALML4Q96GE6 196 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 NKTRP30414 1462 aaKnown RBP10.33□□□□□ -0.76
CTNND1-208ENST00000428599 ZSCAN12O43309 604 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 MAP9Q49MG5 647 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 BAG3O95817 575 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 GPTP24298 496 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 ST5P78524 1137 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.767e-6■□□□□ 8.3
CTNND1-208ENST00000428599 UTP14AQ9BVJ6 771 aaKnown RBP10.33□□□□□ -0.76
CTNND1-208ENST00000428599 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
CTNND1-208ENST00000428599 SPTY2D1Q68D10 685 aaPredicted RBP10.32□□□□□ -0.76
CTNND1-208ENST00000428599 ZNF622Q969S3 477 aaKnown RBP eCLIP10.32□□□□□ -0.763e-7■□□□□ 10.1
CTNND1-208ENST00000428599 SHANK2Q9UPX8 1470 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 DDX46Q7L014 1031 aaKnown RBP10.32□□□□□ -0.76
CTNND1-208ENST00000428599 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 KIF5CO60282 957 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 GLRX3O76003 335 aaKnown RBP10.32□□□□□ -0.76
CTNND1-208ENST00000428599 PLCD3Q8N3E9 789 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 ABCA5Q8WWZ7 1642 aa10.32□□□□□ -0.76
CTNND1-208ENST00000428599 SHTN1A0MZ66 631 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms