RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 MEGF6O75095 1541 aa24.39■■□□□ 1.5
PMPCB-202ENST00000428154 COL15A1P39059 1388 aa24.39■■□□□ 1.49
PMPCB-202ENST00000428154 C5P01031 1676 aa24.38■■□□□ 1.49
PMPCB-202ENST00000428154 HIP1O00291 1037 aa24.38■■□□□ 1.49
PMPCB-202ENST00000428154 SNRPA1P09661 255 aaKnown RBP24.38■■□□□ 1.49
PMPCB-202ENST00000428154 CSB-PGBD3P0DP91 1061 aa24.38■■□□□ 1.49
PMPCB-202ENST00000428154 RIC3Q7Z5B4 369 aa24.38■■□□□ 1.49
PMPCB-202ENST00000428154 IFIT2P09913 472 aaKnown RBP24.38■■□□□ 1.49
PMPCB-202ENST00000428154 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
PMPCB-202ENST00000428154 G3BP1Q13283 466 aaKnown RBP eCLIP24.37■■□□□ 1.498e-6■□□□□ 9
PMPCB-202ENST00000428154 GRPEL1Q9HAV7 217 aa24.37■■□□□ 1.49
PMPCB-202ENST00000428154 EVI5LQ96CN4 794 aa24.36■■□□□ 1.49
PMPCB-202ENST00000428154 FMNL2Q96PY5 1086 aa24.36■■□□□ 1.49
PMPCB-202ENST00000428154 METTL22Q9BUU2 404 aaPredicted RBP24.36■■□□□ 1.49
PMPCB-202ENST00000428154 ERBB4Q15303 1308 aa24.36■■□□□ 1.49
PMPCB-202ENST00000428154 CWF19L2Q2TBE0 894 aaKnown RBP24.35■■□□□ 1.49
PMPCB-202ENST00000428154 NFATC2IPQ8NCF5 419 aa24.35■■□□□ 1.49
PMPCB-202ENST00000428154 PALD1Q9ULE6 856 aa24.35■■□□□ 1.49
PMPCB-202ENST00000428154 DDX49Q9Y6V7 483 aaKnown RBP24.35■■□□□ 1.49
PMPCB-202ENST00000428154 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
PMPCB-202ENST00000428154 PRAMEF22A3QJZ6 481 aa24.34■■□□□ 1.49
PMPCB-202ENST00000428154 ZGPATQ8N5A5 531 aaKnown RBP24.34■■□□□ 1.49
PMPCB-202ENST00000428154 SUCLG2Q96I99 432 aa24.34■■□□□ 1.49
PMPCB-202ENST00000428154 LSG1Q9H089 658 aaKnown RBP24.34■■□□□ 1.49
PMPCB-202ENST00000428154 DIAPH3Q9NSV4 1193 aa24.34■■□□□ 1.49
PMPCB-202ENST00000428154 LAMB4A4D0S4 1761 aa24.34■■□□□ 1.49
PMPCB-202ENST00000428154 NEURL1BA8MQ27 555 aa24.33■■□□□ 1.49
PMPCB-202ENST00000428154 IGKV5-2P06315 115 aa24.32■■□□□ 1.48
PMPCB-202ENST00000428154 GCKRQ14397 625 aa24.32■■□□□ 1.48
PMPCB-202ENST00000428154 BICC1Q9H694 974 aaKnown RBP24.32■■□□□ 1.48
PMPCB-202ENST00000428154 AIMP1Q12904 312 aaKnown RBP24.31■■□□□ 1.48
PMPCB-202ENST00000428154 SLC39A6Q13433 755 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 MCTP1Q6DN14 999 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 ANKRD13DQ6ZTN6 518 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 XAGE3Q8WTP9 111 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 KAZALD1Q96I82 304 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 ZNF496Q96IT1 587 aaPredicted RBP24.31■■□□□ 1.48
PMPCB-202ENST00000428154 LMBRD1Q9NUN5 540 aa24.31■■□□□ 1.48
PMPCB-202ENST00000428154 BRD1O95696 1058 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 CYP27B1O15528 508 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 CABP4P57796 275 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 COPS6Q7L5N1 327 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 AACSQ86V21 672 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 TM6SF1Q9BZW5 370 aa24.3■■□□□ 1.48
PMPCB-202ENST00000428154 LRP10Q7Z4F1 713 aa24.29■■□□□ 1.48
PMPCB-202ENST00000428154 KCNB2Q92953 911 aa24.29■■□□□ 1.48
PMPCB-202ENST00000428154 ZDHHC9Q9Y397 364 aa24.29■■□□□ 1.48
PMPCB-202ENST00000428154 ZNF445P59923 1031 aa24.28■■□□□ 1.48
PMPCB-202ENST00000428154 SNRKQ9NRH2 765 aa24.28■■□□□ 1.48
PMPCB-202ENST00000428154 SNX14Q9Y5W7 946 aa24.28■■□□□ 1.48
PMPCB-202ENST00000428154 MAP4K4O95819 1239 aaPredicted RBP24.27■■□□□ 1.48
PMPCB-202ENST00000428154 COPRSQ9NQ92 184 aa24.27■■□□□ 1.48
PMPCB-202ENST00000428154 PA2G4Q9UQ80 394 aaKnown RBP24.27■■□□□ 1.48
PMPCB-202ENST00000428154 SASH1O94885 1247 aa24.27■■□□□ 1.48
PMPCB-202ENST00000428154 CWC27Q6UX04 472 aaKnown RBP24.27■■□□□ 1.48
PMPCB-202ENST00000428154 IL25Q9H293 177 aa24.27■■□□□ 1.48
PMPCB-202ENST00000428154 PCDH11XQ9BZA7 1347 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 PCDH11YQ9BZA8 1340 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 MBD3O95983 291 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 MYL6BP14649 208 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 TTC14Q96N46 770 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 MYD88Q99836 296 aa24.26■■□□□ 1.47
PMPCB-202ENST00000428154 WDR17Q8IZU2 1322 aa24.25■■□□□ 1.47
PMPCB-202ENST00000428154 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
PMPCB-202ENST00000428154 PKP1Q13835 747 aa24.25■■□□□ 1.47
PMPCB-202ENST00000428154 RABL6Q3YEC7 729 aaPredicted RBP24.25■■□□□ 1.47
PMPCB-202ENST00000428154 XIRP1Q702N8 1843 aaKnown RBP24.25■■□□□ 1.47
PMPCB-202ENST00000428154 ARFGEF2Q9Y6D5 1785 aa24.25■■□□□ 1.47
PMPCB-202ENST00000428154 WDR33Q9C0J8 1336 aaKnown RBP24.25■■□□□ 1.47
PMPCB-202ENST00000428154 AFDNP55196 1824 aaKnown RBP24.24■■□□□ 1.47
PMPCB-202ENST00000428154 PDIA4P13667 645 aaKnown RBP24.24■■□□□ 1.47
PMPCB-202ENST00000428154 PLBD2Q8NHP8 589 aa24.24■■□□□ 1.47
PMPCB-202ENST00000428154 DDX17Q92841 729 aaKnown RBP24.24■■□□□ 1.47
PMPCB-202ENST00000428154 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.24■■□□□ 1.47
PMPCB-202ENST00000428154 TICAM2Q86XR7 235 aa24.24■■□□□ 1.47
PMPCB-202ENST00000428154 CABLES1Q8TDN4 633 aa24.24■■□□□ 1.47
PMPCB-202ENST00000428154 UPF3BQ9BZI7 483 aaKnown RBP24.24■■□□□ 1.47
PMPCB-202ENST00000428154 LIMCH1Q9UPQ0 1083 aa24.24■■□□□ 1.47
PMPCB-202ENST00000428154 USP16Q9Y5T5 823 aa24.24■■□□□ 1.47
PMPCB-202ENST00000428154 RFX7Q2KHR2 1363 aa24.23■■□□□ 1.47
PMPCB-202ENST00000428154 CHRNA2Q15822 529 aa24.23■■□□□ 1.47
PMPCB-202ENST00000428154 EAF2Q96CJ1 260 aaPredicted RBP24.23■■□□□ 1.47
PMPCB-202ENST00000428154 ZSCAN31Q96LW9 406 aaPredicted RBP24.23■■□□□ 1.47
PMPCB-202ENST00000428154 GLI3P10071 1580 aa24.22■■□□□ 1.47
PMPCB-202ENST00000428154 ZKSCAN1P17029 563 aaPredicted RBP24.21■■□□□ 1.47
PMPCB-202ENST00000428154 NKX1-1Q15270 411 aaPredicted RBP24.21■■□□□ 1.47
PMPCB-202ENST00000428154 VPS53Q5VIR6 699 aa24.21■■□□□ 1.47
PMPCB-202ENST00000428154 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
PMPCB-202ENST00000428154 SOS2Q07890 1332 aaPredicted RBP24.21■■□□□ 1.47
PMPCB-202ENST00000428154 UBR2Q8IWV8 1755 aa24.21■■□□□ 1.47
PMPCB-202ENST00000428154 ZCRB1Q8TBF4 217 aaKnown RBP24.21■■□□□ 1.47
PMPCB-202ENST00000428154 SH2B1Q9NRF2 756 aaPredicted RBP24.21■■□□□ 1.47
PMPCB-202ENST00000428154 CCDC171Q6TFL3 1326 aa24.2■■□□□ 1.47
PMPCB-202ENST00000428154 PRPF40AO75400 957 aaKnown RBP24.2■■□□□ 1.46
PMPCB-202ENST00000428154 GAS2L3Q86XJ1 694 aa24.2■■□□□ 1.46
PMPCB-202ENST00000428154 ANP32BQ92688 251 aaKnown RBP24.2■■□□□ 1.46
PMPCB-202ENST00000428154 ZSWIM6Q9HCJ5 1215 aa24.19■■□□□ 1.46
PMPCB-202ENST00000428154 PSMA5P28066 241 aa24.18■■□□□ 1.46
PMPCB-202ENST00000428154 NECTIN1Q15223 517 aa24.18■■□□□ 1.46
PMPCB-202ENST00000428154 RNF20Q5VTR2 975 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms