RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ITSN2Q9NZM3 1697 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 KRT32Q14532 448 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 NBPF14Q5TI25 921 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 CDC5LQ99459 802 aaKnown RBP11.39□□□□□ -0.59
SNX13-203ENST00000428135 KRT24Q2M2I5 525 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 FILIP1Q7Z7B0 1213 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 CTCFLQ8NI51 663 aaPredicted RBP11.39□□□□□ -0.59
SNX13-203ENST00000428135 CCDC39Q9UFE4 941 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 SCAF11Q99590 1463 aaKnown RBP11.38□□□□□ -0.59
SNX13-203ENST00000428135 GOLGA8BA8MQT2 603 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 DHX37Q8IY37 1157 aaKnown RBP11.38□□□□□ -0.59
SNX13-203ENST00000428135 LRRC2Q9BYS8 371 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 IQCA1Q86XH1 822 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 TSPY2A6NKD2 308 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 APBA3O96018 575 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 SIRT1Q96EB6 747 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 ZNF287Q9HBT7 754 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 ERCC6L2Q5T890 1561 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 NLRP5P59047 1200 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 LETM1O95202 739 aaPredicted RBP11.38□□□□□ -0.59
SNX13-203ENST00000428135 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
SNX13-203ENST00000428135 GOLGA8AA7E2F4 631 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 ISM2Q6H9L7 571 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 GDPD2Q9HCC8 539 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 MRE11P49959 708 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 BRPF3Q9ULD4 1205 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 PA2G4Q9UQ80 394 aaKnown RBP11.37□□□□□ -0.59
SNX13-203ENST00000428135 ZFYVE16Q7Z3T8 1539 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 TCEANC2Q96MN5 208 aa11.37□□□□□ -0.59
SNX13-203ENST00000428135 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 NEFHP12036 1026 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 MEIS3Q99687 375 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 NUP62CLQ9H1M0 184 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 STX8Q9UNK0 236 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 GNPATO15228 680 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 DNA2P51530 1060 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 VEZTQ9HBM0 779 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 EIF5P55010 431 aaKnown RBP11.36□□□□□ -0.59
SNX13-203ENST00000428135 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 ZSCAN31Q96LW9 406 aaPredicted RBP11.36□□□□□ -0.59
SNX13-203ENST00000428135 CFAP45Q9UL16 551 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 WASF1Q92558 559 aa11.36□□□□□ -0.59
SNX13-203ENST00000428135 TFIP11Q9UBB9 837 aaKnown RBP11.36□□□□□ -0.59
SNX13-203ENST00000428135 POLD1P28340 1107 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 EIF4A2Q14240 407 aaKnown RBP11.35□□□□□ -0.59
SNX13-203ENST00000428135 TMEM67Q5HYA8 995 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 ANKRD62A6NC57 917 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 CCDC152Q4G0S7 254 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 SAMM50Q9Y512 469 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 TARBP1Q13395 1621 aaKnown RBP11.35□□□□□ -0.59
SNX13-203ENST00000428135 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
SNX13-203ENST00000428135 TNIP1Q15025 636 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 ANKRD18AQ8IVF6 992 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 CUL5Q93034 780 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 QTRT2Q9H974 415 aaKnown RBP11.35□□□□□ -0.59
SNX13-203ENST00000428135 SYCE3A1L190 88 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
SNX13-203ENST00000428135 C8orf58Q8NAV2 365 aa11.35□□□□□ -0.59
SNX13-203ENST00000428135 WDHD1O75717 1129 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 MTHFSDQ2M296 383 aaKnown RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 HSP90B2PQ58FF3 399 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 TTC16Q8NEE8 873 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 CCDC181Q5TID7 509 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 LMBR1LQ6UX01 489 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 CATIPQ7Z7H3 387 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 DACH1Q9UI36 760 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 CWF19L2Q2TBE0 894 aaKnown RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 TEX13AQ9BXU3 409 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 ARGLU1Q9NWB6 273 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 NPATQ14207 1427 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 CYP7A1P22680 504 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 SETQ01105 290 aaPredicted RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 VSIG10Q8N0Z9 540 aa11.34□□□□□ -0.59
SNX13-203ENST00000428135 NSFL1CQ9UNZ2 370 aaKnown RBP11.34□□□□□ -0.59
SNX13-203ENST00000428135 BIN1O00499 593 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 NEBLO76041 1014 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 TNNT1P13805 278 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 CA8P35219 290 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 FAM193AP78312 1265 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 CFAP100Q494V2 611 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 ECHDC1Q9NTX5 307 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 TNNQ9UQP3 1299 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 RTCBQ9Y3I0 505 aaKnown RBP11.33□□□□□ -0.6
SNX13-203ENST00000428135 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
SNX13-203ENST00000428135 RBM10P98175 930 aaKnown RBP11.33□□□□□ -0.6
SNX13-203ENST00000428135 CCNL1Q9UK58 526 aaPredicted RBP11.33□□□□□ -0.6
SNX13-203ENST00000428135 TMEM94Q12767 1356 aa11.33□□□□□ -0.6
SNX13-203ENST00000428135 CCDC194A0A1B0GVG4 234 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms