RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 GPR162Q16538 588 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 NIP7Q9Y221 180 aaKnown RBP eCLIP11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 TTC21BQ7Z4L5 1316 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 IFIT3O14879 490 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 TMPOP42166 694 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 LRSAM1Q6UWE0 723 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC112Q8NEF3 446 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 THUMPD2Q9BTF0 503 aaKnown RBP11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 TNMDQ9H2S6 317 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 CBFA2T2O43439 604 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 BICD1Q96G01 975 aa11.57□□□□□ -0.56
CLTCL1-202ENST00000427926 TNNI2P48788 182 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 PICALMQ13492 652 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 TAF4BQ92750 862 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 UTP14AQ9BVJ6 771 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 CETN1Q12798 172 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 STXBP4Q6ZWJ1 553 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 DDX11Q96FC9 970 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 SPATA32Q96LK8 384 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 WDR33Q9C0J8 1336 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 NFKBIBQ15653 356 aa11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 MTERF4Q7Z6M4 381 aaKnown RBP11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
CLTCL1-202ENST00000427926 IL2RBP14784 551 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC8Q9H0W5 538 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 TAF12Q16514 161 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 MAP3K2Q9Y2U5 619 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 PRPF40AO75400 957 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 VPS36Q86VN1 386 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 GOLGA8AA7E2F4 631 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 UQCRFS1P1P0C7P4 283 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 CASTP20810 708 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
CLTCL1-202ENST00000427926 ACEP12821 1306 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TRAPPC3LQ5T215 181 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 CHD1LQ86WJ1 897 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TAX1BP1Q86VP1 789 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TSPY26PQ9H489 355 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 C19orf44Q9H6X5 657 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 FKBP15Q5T1M5 1219 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TAF3Q5VWG9 929 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 STX8Q9UNK0 236 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TSPY3P0CV98 308 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 TSPY8P0CW00 308 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC192P0DO97 292 aa11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 EIF6P56537 245 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-202ENST00000427926 MX1P20591 662 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 CAVIN1Q6NZI2 390 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 NSFL1CQ9UNZ2 370 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 FGFR1OPO95684 399 aaKnown RBP11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 PSMD1Q99460 953 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 FANCAO15360 1455 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 RIMBP2O15034 1052 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 ZNF771Q7L3S4 317 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 SIRT1Q96EB6 747 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 CALML4Q96GE6 196 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 WDR7Q9Y4E6 1490 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 GNPATO15228 680 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 ZNF354CQ86Y25 554 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 CABLES1Q8TDN4 633 aa11.53□□□□□ -0.56
CLTCL1-202ENST00000427926 CTNNA2P26232 953 aa11.52□□□□□ -0.56
CLTCL1-202ENST00000427926 CCDC184Q52MB2 194 aa11.52□□□□□ -0.56
CLTCL1-202ENST00000427926 CACNA2D4Q7Z3S7 1137 aa11.52□□□□□ -0.56
CLTCL1-202ENST00000427926 SNRKQ9NRH2 765 aa11.52□□□□□ -0.56
CLTCL1-202ENST00000427926 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.56
CLTCL1-202ENST00000427926 PRPF40BQ6NWY9 871 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 CCDC174Q6PII3 467 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 MFSD6Q6ZSS7 791 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 KIAA1328Q86T90 577 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 SSX2IPQ9Y2D8 614 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 MACROD2A1Z1Q3 448 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 GOLIM4O00461 696 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 RRP9O43818 475 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 FERMT1Q9BQL6 677 aa11.52□□□□□ -0.57
CLTCL1-202ENST00000427926 CCDC178Q5BJE1 867 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 IQCEQ6IPM2 695 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 CCNL1Q9UK58 526 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 BRDTQ58F21 947 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 C8orf76Q96K31 380 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 F6X3S4 739 aa11.51□□□□□ -0.57
CLTCL1-202ENST00000427926 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms