RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ESYT1Q9BSJ8 1104 aa17.14■□□□□ 0.33
APOBEC3D-202ENST00000427494 METTL22Q9BUU2 404 aaPredicted RBP17.14■□□□□ 0.33
APOBEC3D-202ENST00000427494 ARFGEF2Q9Y6D5 1785 aa17.14■□□□□ 0.33
APOBEC3D-202ENST00000427494 UBR2Q8IWV8 1755 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 CHMLP26374 656 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 BICC1Q9H694 974 aaKnown RBP17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 PAPPAQ13219 1627 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 HSP90AA1P07900 732 aaKnown RBP17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 ANKRD13DQ6ZTN6 518 aa17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
APOBEC3D-202ENST00000427494 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
APOBEC3D-202ENST00000427494 DDIT3P35638 169 aa17.12■□□□□ 0.33
APOBEC3D-202ENST00000427494 PI4K2BQ8TCG2 481 aa17.12■□□□□ 0.33
APOBEC3D-202ENST00000427494 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
APOBEC3D-202ENST00000427494 KAZALD1Q96I82 304 aa17.12■□□□□ 0.33
APOBEC3D-202ENST00000427494 GCKRQ14397 625 aa17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 GSE1Q14687 1217 aa17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
APOBEC3D-202ENST00000427494 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
APOBEC3D-202ENST00000427494 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
APOBEC3D-202ENST00000427494 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
APOBEC3D-202ENST00000427494 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
APOBEC3D-202ENST00000427494 TTC41PQ6P2S7 1318 aa17.09■□□□□ 0.33
APOBEC3D-202ENST00000427494 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
APOBEC3D-202ENST00000427494 TOGARAM1Q9Y4F4 1720 aa17.09■□□□□ 0.33
APOBEC3D-202ENST00000427494 ERBB4Q15303 1308 aa17.08■□□□□ 0.33
APOBEC3D-202ENST00000427494 MCCP23508 829 aa17.08■□□□□ 0.33
APOBEC3D-202ENST00000427494 CNTROBQ8N137 903 aa17.08■□□□□ 0.33
APOBEC3D-202ENST00000427494 ST18O60284 1047 aa17.08■□□□□ 0.32
APOBEC3D-202ENST00000427494 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
APOBEC3D-202ENST00000427494 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
APOBEC3D-202ENST00000427494 MCM4P33991 863 aa17.07■□□□□ 0.32
APOBEC3D-202ENST00000427494 PLBD2Q8NHP8 589 aa17.07■□□□□ 0.32
APOBEC3D-202ENST00000427494 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
APOBEC3D-202ENST00000427494 NBPF26B4DH59 902 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 GLRX3O76003 335 aaKnown RBP17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 NBPF14Q5TI25 921 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 NBPF10Q6P3W6 841 aaKnown RBP17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 NBPF15Q8N660 670 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 ROBO1Q9Y6N7 1651 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 PTCD1O75127 700 aaKnown RBP17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 EPHA10Q5JZY3 1008 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 AACSQ86V21 672 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
APOBEC3D-202ENST00000427494 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
APOBEC3D-202ENST00000427494 ATP5J2-PTCD1G3V325 749 aa17.05■□□□□ 0.32
APOBEC3D-202ENST00000427494 JARID2Q92833 1246 aaPredicted RBP17.05■□□□□ 0.32
APOBEC3D-202ENST00000427494 SIL1Q9H173 461 aa17.05■□□□□ 0.32
APOBEC3D-202ENST00000427494 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
APOBEC3D-202ENST00000427494 SASH1O94885 1247 aa17.04■□□□□ 0.32
APOBEC3D-202ENST00000427494 UBE3BQ7Z3V4 1068 aa17.04■□□□□ 0.32
APOBEC3D-202ENST00000427494 IL25Q9H293 177 aa17.04■□□□□ 0.32
APOBEC3D-202ENST00000427494 A0A087WZG4 1122 aa17.03■□□□□ 0.32
APOBEC3D-202ENST00000427494 A1BGP04217 495 aa17.03■□□□□ 0.32
APOBEC3D-202ENST00000427494 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
APOBEC3D-202ENST00000427494 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
APOBEC3D-202ENST00000427494 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
APOBEC3D-202ENST00000427494 COL15A1P39059 1388 aa17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 ANAPC15P60006 121 aa17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 TTLL7Q6ZT98 887 aa17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 PALD1Q9ULE6 856 aa17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
APOBEC3D-202ENST00000427494 SGSM2O43147 1006 aa17.02■□□□□ 0.31
APOBEC3D-202ENST00000427494 AHDC1Q5TGY3 1603 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 EPB41L2O43491 1005 aaKnown RBP17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 NEK4P51957 841 aa17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 EAF2Q96CJ1 260 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 COL22A1Q8NFW1 1626 aaPredicted RBP17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 TJP1Q07157 1748 aa17.01■□□□□ 0.31
APOBEC3D-202ENST00000427494 CCDC8Q9H0W5 538 aaPredicted RBP17■□□□□ 0.31
APOBEC3D-202ENST00000427494 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
APOBEC3D-202ENST00000427494 ITGB4P16144 1822 aa17■□□□□ 0.31
APOBEC3D-202ENST00000427494 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
APOBEC3D-202ENST00000427494 CASP7P55210 303 aa17■□□□□ 0.31
APOBEC3D-202ENST00000427494 RABL6Q3YEC7 729 aaPredicted RBP17■□□□□ 0.31
APOBEC3D-202ENST00000427494 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
APOBEC3D-202ENST00000427494 COPRSQ9NQ92 184 aa17■□□□□ 0.31
APOBEC3D-202ENST00000427494 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
APOBEC3D-202ENST00000427494 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
APOBEC3D-202ENST00000427494 TLR7Q9NYK1 1049 aaKnown RBP16.99■□□□□ 0.31
APOBEC3D-202ENST00000427494 RAD50Q92878 1312 aa16.99■□□□□ 0.31
APOBEC3D-202ENST00000427494 PLCH1Q4KWH8 1693 aa16.99■□□□□ 0.31
APOBEC3D-202ENST00000427494 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
APOBEC3D-202ENST00000427494 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 HSPA4P34932 840 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 EVI5LQ96CN4 794 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 IL17RAQ96F46 866 aa16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
APOBEC3D-202ENST00000427494 H7C1W4 665 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms