RNA–Protein interactions for RNA: ENST00000427196.1

HCG25-218, Transcript of HLA complex group 25, humanhuman

TSL 2

Gene HCG25, Length 677 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-218ENST00000427196 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
HCG25-218ENST00000427196 MAP1SQ66K74 1059 aaPredicted RBP8.66□□□□□ -1.02
HCG25-218ENST00000427196 DPY19L2Q6NUT2 758 aa8.66□□□□□ -1.02
HCG25-218ENST00000427196 MPNDQ8N594 471 aa8.66□□□□□ -1.02
HCG25-218ENST00000427196 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
HCG25-218ENST00000427196 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
HCG25-218ENST00000427196 AKAP11Q9UKA4 1901 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 GNAT3A8MTJ3 354 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 GYS1P13807 737 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 RIPK4P57078 832 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 DCTN1Q14203 1278 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 IL17REQ8NFR9 667 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 CLEC11AQ9Y240 323 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 CEP290O15078 2479 aa8.65□□□□□ -1.02
HCG25-218ENST00000427196 SIPA1L3O60292 1781 aaPredicted RBP8.65□□□□□ -1.02
HCG25-218ENST00000427196 ANKRD31Q8N7Z5 1873 aa8.64□□□□□ -1.03
HCG25-218ENST00000427196 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
HCG25-218ENST00000427196 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
HCG25-218ENST00000427196 DDR1Q08345 913 aa8.64□□□□□ -1.03
HCG25-218ENST00000427196 ERFEQ4G0M1 354 aa8.64□□□□□ -1.03
HCG25-218ENST00000427196 MCM10Q7L590 875 aa8.64□□□□□ -1.03
HCG25-218ENST00000427196 THUMPD2Q9BTF0 503 aaKnown RBP8.64□□□□□ -1.03
HCG25-218ENST00000427196 TAF1DQ9H5J8 278 aaPredicted RBP8.64□□□□□ -1.03
HCG25-218ENST00000427196 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
HCG25-218ENST00000427196 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
HCG25-218ENST00000427196 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 ERVV-2B6SEH9 535 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 HTATSF1O43719 755 aaKnown RBP8.62□□□□□ -1.03
HCG25-218ENST00000427196 ECE1P42892 770 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 SIK1P57059 783 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 CABP4P57796 275 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 NLGN1Q8N2Q7 840 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 RTF1Q92541 710 aaKnown RBP8.62□□□□□ -1.03
HCG25-218ENST00000427196 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
HCG25-218ENST00000427196 NRXN2Q9P2S2 1712 aa8.62□□□□□ -1.03
HCG25-218ENST00000427196 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 LAMB4A4D0S4 1761 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 PAPPA2Q9BXP8 1791 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 CIAPIN1Q6FI81 312 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 CNTROBQ8N137 903 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 PIGBQ92521 554 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 ARHGEF1Q92888 912 aaKnown RBP8.61□□□□□ -1.03
HCG25-218ENST00000427196 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
HCG25-218ENST00000427196 MRC1P22897 1456 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 SLX4Q8IY92 1834 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 LMOD3Q0VAK6 560 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 TEFQ10587 303 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 WWC1Q8IX03 1113 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 ZIC5Q96T25 663 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 SLC52A2Q9HAB3 445 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 DDX21Q9NR30 783 aaKnown RBP eCLIP8.6□□□□□ -1.03
HCG25-218ENST00000427196 MIS18AQ9NYP9 233 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 CARMIL3Q8ND23 1372 aa8.6□□□□□ -1.03
HCG25-218ENST00000427196 ZNF541Q9H0D2 1346 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 KDM3BQ7LBC6 1761 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 ARFGEF2Q9Y6D5 1785 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 IQCA1LA6NCM1 817 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 TRAF5O00463 557 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 HNRNPUQ00839 825 aaKnown RBP eCLIP8.59□□□□□ -1.03
HCG25-218ENST00000427196 SLC39A6Q13433 755 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 FKBP8Q14318 412 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 TRAPPC3LQ5T215 181 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 SMARCC1Q92922 1105 aaPredicted RBP8.59□□□□□ -1.03
HCG25-218ENST00000427196 ASAP1Q9ULH1 1129 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 HPS5Q9UPZ3 1129 aa8.59□□□□□ -1.03
HCG25-218ENST00000427196 COLQQ9Y215 455 aaPredicted RBP8.59□□□□□ -1.03
HCG25-218ENST00000427196 RTCBQ9Y3I0 505 aaKnown RBP8.59□□□□□ -1.03
HCG25-218ENST00000427196 KIAA0100Q14667 2235 aaKnown RBP8.59□□□□□ -1.03
HCG25-218ENST00000427196 UBR2Q8IWV8 1755 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 RNF123Q5XPI4 1314 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 KCNQ3O43525 872 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 CA12O43570 354 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 TAF7Q15545 349 aaPredicted RBP8.58□□□□□ -1.04
HCG25-218ENST00000427196 CCDC27Q2M243 656 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 NCBP3Q53F19 620 aaKnown RBP8.58□□□□□ -1.04
HCG25-218ENST00000427196 ATG3Q9NT62 314 aa8.58□□□□□ -1.04
HCG25-218ENST00000427196 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
HCG25-218ENST00000427196 BTBD11A6QL63 1104 aa8.57□□□□□ -1.04
HCG25-218ENST00000427196 POLRMTO00411 1230 aaKnown RBP8.57□□□□□ -1.04
HCG25-218ENST00000427196 EPHX2P34913 555 aa8.57□□□□□ -1.04
HCG25-218ENST00000427196 RFC4P35249 363 aa8.57□□□□□ -1.04
HCG25-218ENST00000427196 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
HCG25-218ENST00000427196 L3MBTL3Q96JM7 780 aaPredicted RBP8.57□□□□□ -1.04
HCG25-218ENST00000427196 TLL2Q9Y6L7 1015 aa8.57□□□□□ -1.04
HCG25-218ENST00000427196 BCORQ6W2J9 1755 aa8.57□□□□□ -1.04
HCG25-218ENST00000427196 ZNF521Q96K83 1311 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 RBBP6Q7Z6E9 1792 aaKnown RBP8.56□□□□□ -1.04
HCG25-218ENST00000427196 CHL1O00533 1208 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 C21orf2O43822 256 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 MAP2K2P36507 400 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 CST9Q5W186 159 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 YTHDC1Q96MU7 727 aaKnown RBP8.56□□□□□ -1.04
HCG25-218ENST00000427196 SPINK5Q9NQ38 1064 aaPredicted RBP8.56□□□□□ -1.04
HCG25-218ENST00000427196 HACL1Q9UJ83 578 aa8.56□□□□□ -1.04
HCG25-218ENST00000427196 TJP1Q07157 1748 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms