RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 LTBP3Q9NS15 1303 aa11.73□□□□□ -0.53
VNN3-208ENST00000427187 PASKQ96RG2 1323 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 PRAMEF22A3QJZ6 481 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 IL6STP40189 918 aaPredicted RBP11.72□□□□□ -0.53
VNN3-208ENST00000427187 VEGFBP49765 207 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 ST5P78524 1137 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 STYK1Q6J9G0 422 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
VNN3-208ENST00000427187 CNKSR1Q969H4 720 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 PDZRN3Q9UPQ7 1066 aa11.72□□□□□ -0.53
VNN3-208ENST00000427187 COL3A1P02461 1466 aaPredicted RBP11.71□□□□□ -0.53
VNN3-208ENST00000427187 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.53
VNN3-208ENST00000427187 NPM2Q86SE8 214 aaKnown RBP11.71□□□□□ -0.53
VNN3-208ENST00000427187 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
VNN3-208ENST00000427187 MASTLQ96GX5 879 aa11.71□□□□□ -0.53
VNN3-208ENST00000427187 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
VNN3-208ENST00000427187 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
VNN3-208ENST00000427187 ZNF277Q9NRM2 450 aaPredicted RBP11.71□□□□□ -0.53
VNN3-208ENST00000427187 SCN4AP35499 1836 aa11.71□□□□□ -0.54
VNN3-208ENST00000427187 KIF7Q2M1P5 1343 aa11.7□□□□□ -0.54
VNN3-208ENST00000427187 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
VNN3-208ENST00000427187 FAM177BA6PVY3 158 aa11.7□□□□□ -0.54
VNN3-208ENST00000427187 NBPF5PQ86XG9 351 aaPredicted RBP11.7□□□□□ -0.54
VNN3-208ENST00000427187 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
VNN3-208ENST00000427187 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
VNN3-208ENST00000427187 USP16Q9Y5T5 823 aa11.7□□□□□ -0.54
VNN3-208ENST00000427187 RNF123Q5XPI4 1314 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 TMEM88BA6NKF7 163 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
VNN3-208ENST00000427187 LBX1P52954 281 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 CCDC93Q567U6 631 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 C7orf43Q8WVR3 580 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 AIDAQ96BJ3 306 aa11.69□□□□□ -0.54
VNN3-208ENST00000427187 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
VNN3-208ENST00000427187 CLSPNQ9HAW4 1339 aa11.68□□□□□ -0.54
VNN3-208ENST00000427187 SOGA3Q5TF21 947 aa11.68□□□□□ -0.54
VNN3-208ENST00000427187 MAP1SQ66K74 1059 aaPredicted RBP11.68□□□□□ -0.54
VNN3-208ENST00000427187 PHACTR3Q96KR7 559 aa11.68□□□□□ -0.54
VNN3-208ENST00000427187 HACL1Q9UJ83 578 aa11.68□□□□□ -0.54
VNN3-208ENST00000427187 ADAMTSL1Q8N6G6 1762 aa11.68□□□□□ -0.54
VNN3-208ENST00000427187 PER1O15534 1290 aaPredicted RBP11.67□□□□□ -0.54
VNN3-208ENST00000427187 NPR1P16066 1061 aa11.67□□□□□ -0.54
VNN3-208ENST00000427187 EPHX2P34913 555 aa11.67□□□□□ -0.54
VNN3-208ENST00000427187 CTCFP49711 727 aaPredicted RBP11.67□□□□□ -0.54
VNN3-208ENST00000427187 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
VNN3-208ENST00000427187 PRDM10Q9NQV6 1147 aa11.67□□□□□ -0.54
VNN3-208ENST00000427187 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
VNN3-208ENST00000427187 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
VNN3-208ENST00000427187 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
VNN3-208ENST00000427187 SLC51AQ86UW1 340 aa11.66□□□□□ -0.54
VNN3-208ENST00000427187 WBP1LQ9NX94 342 aa11.66□□□□□ -0.54
VNN3-208ENST00000427187 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
VNN3-208ENST00000427187 COL4A5P29400 1685 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
VNN3-208ENST00000427187 HLFQ16534 295 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
VNN3-208ENST00000427187 MCM10Q7L590 875 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 CNTROBQ8N137 903 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
VNN3-208ENST00000427187 ABT1Q9ULW3 272 aaKnown RBP11.65□□□□□ -0.54
VNN3-208ENST00000427187 LTBP1Q14766 1721 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
VNN3-208ENST00000427187 GRM1Q13255 1194 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 DCTN1Q14203 1278 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 DEFB115Q30KQ5 88 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
VNN3-208ENST00000427187 KLRG2A4D1S0 409 aaPredicted RBP11.63□□□□□ -0.55
VNN3-208ENST00000427187 RASSF10A6NK89 507 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 FZD9O00144 591 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
VNN3-208ENST00000427187 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 CLEC4GQ6UXB4 293 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 PAXIP1Q6ZW49 1069 aaPredicted RBP11.63□□□□□ -0.55
VNN3-208ENST00000427187 NUTM1Q86Y26 1132 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 RTKN2Q8IZC4 609 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 ABHD8Q96I13 439 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 ABCC12Q96J65 1359 aa11.63□□□□□ -0.55
VNN3-208ENST00000427187 WDR33Q9C0J8 1336 aaKnown RBP11.62□□□□□ -0.55
VNN3-208ENST00000427187 GTF2E1P29083 439 aaPredicted RBP11.62□□□□□ -0.55
VNN3-208ENST00000427187 PNMA8AQ86V59 439 aaPredicted RBP11.62□□□□□ -0.55
VNN3-208ENST00000427187 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
VNN3-208ENST00000427187 SNED1Q8TER0 1413 aa11.61□□□□□ -0.55
VNN3-208ENST00000427187 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
VNN3-208ENST00000427187 GPC2Q8N158 579 aa11.61□□□□□ -0.55
VNN3-208ENST00000427187 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
VNN3-208ENST00000427187 MIS18AQ9NYP9 233 aa11.61□□□□□ -0.55
VNN3-208ENST00000427187 TSKSQ9UJT2 592 aa11.61□□□□□ -0.55
VNN3-208ENST00000427187 TRAF5O00463 557 aa11.6□□□□□ -0.55
VNN3-208ENST00000427187 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
VNN3-208ENST00000427187 EPS15P42566 896 aa11.6□□□□□ -0.55
VNN3-208ENST00000427187 CYP4F22Q6NT55 531 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms