RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 GRXCR2A6NFK2 248 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 BAG6P46379 1132 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 PSEN2P49810 448 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 FAM9BQ8IZU0 186 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 ARIH1Q9Y4X5 557 aaPredicted RBP9.79□□□□□ -0.84
LINC01049-201ENST00000426840 ITGB4P16144 1822 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 MAPK8IP3Q9UPT6 1336 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
LINC01049-201ENST00000426840 NHSQ6T4R5 1651 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 APAF1O14727 1248 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 RIPK4P57078 832 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 CABP4P57796 275 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 DCTN1Q14203 1278 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 EZH2Q15910 746 aaKnown RBP9.78□□□□□ -0.84
LINC01049-201ENST00000426840 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 KCNK17Q96T54 332 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 TMOD3Q9NYL9 352 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 DOT1LQ8TEK3 1739 aa9.78□□□□□ -0.84
LINC01049-201ENST00000426840 TNS1Q9HBL0 1735 aaKnown RBP9.78□□□□□ -0.84
LINC01049-201ENST00000426840 ADAMTS7Q9UKP4 1686 aa9.77□□□□□ -0.84
LINC01049-201ENST00000426840 CEMIPQ8WUJ3 1361 aa9.77□□□□□ -0.84
LINC01049-201ENST00000426840 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 MCM10Q7L590 875 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 RTF1Q92541 710 aaKnown RBP9.77□□□□□ -0.85
LINC01049-201ENST00000426840 ADAM33Q9BZ11 813 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 ATG3Q9NT62 314 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 ASAP1Q9ULH1 1129 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 RRP7AQ9Y3A4 280 aaKnown RBP9.77□□□□□ -0.85
LINC01049-201ENST00000426840 SCN11AQ9UI33 1791 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 BTAF1O14981 1849 aa9.77□□□□□ -0.85
LINC01049-201ENST00000426840 DLG5Q8TDM6 1919 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 PHF14O94880 888 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 NBR1Q14596 966 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 NEUROD2Q15784 382 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 TXNRD1Q16881 649 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 EP400Q96L91 3159 aa9.76□□□□□ -0.85
LINC01049-201ENST00000426840 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 PBX2P40425 430 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 TEFQ10587 303 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 TYW1BQ6NUM6 668 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
LINC01049-201ENST00000426840 THUMPD2Q9BTF0 503 aaKnown RBP9.75□□□□□ -0.85
LINC01049-201ENST00000426840 PLSCR2Q9NRY7 297 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
LINC01049-201ENST00000426840 VIRMAQ69YN4 1812 aaKnown RBP9.75□□□□□ -0.85
LINC01049-201ENST00000426840 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
LINC01049-201ENST00000426840 PTGER2P43116 358 aa9.74□□□□□ -0.85
LINC01049-201ENST00000426840 SLC39A6Q13433 755 aa9.74□□□□□ -0.85
LINC01049-201ENST00000426840 TAF7Q15545 349 aaPredicted RBP9.74□□□□□ -0.85
LINC01049-201ENST00000426840 DMRTA1Q5VZB9 504 aa9.74□□□□□ -0.85
LINC01049-201ENST00000426840 MRC1P22897 1456 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 KCNQ3O43525 872 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 MLLT3P42568 568 aaPredicted RBP9.73□□□□□ -0.85
LINC01049-201ENST00000426840 KCNQ4P56696 695 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 LSM11P83369 360 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC01049-201ENST00000426840 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 SLC4A9Q96Q91 983 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 PALLDQ8WX93 1383 aa9.73□□□□□ -0.85
LINC01049-201ENST00000426840 LOC102724428A0A0B4J2F2 783 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 BTBD11A6QL63 1104 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 PTPREP23469 700 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 SIK1P57059 783 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 LMOD3Q0VAK6 560 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 CCDC27Q2M243 656 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 ZNF790Q6PG37 636 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
LINC01049-201ENST00000426840 LY75O60449 1722 aa9.71□□□□□ -0.85
LINC01049-201ENST00000426840 SIPA1L3O60292 1781 aaPredicted RBP9.71□□□□□ -0.85
LINC01049-201ENST00000426840 SEMA3EO15041 775 aa9.71□□□□□ -0.86
LINC01049-201ENST00000426840 PTCD1O75127 700 aaKnown RBP9.71□□□□□ -0.86
LINC01049-201ENST00000426840 ITPK1Q13572 414 aa9.71□□□□□ -0.86
LINC01049-201ENST00000426840 WWC1Q8IX03 1113 aa9.71□□□□□ -0.86
LINC01049-201ENST00000426840 FBXW7Q969H0 707 aa9.71□□□□□ -0.86
LINC01049-201ENST00000426840 EPAS1Q99814 870 aa9.71□□□□□ -0.86
LINC01049-201ENST00000426840 CCNL1Q9UK58 526 aaPredicted RBP9.71□□□□□ -0.86
LINC01049-201ENST00000426840 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
LINC01049-201ENST00000426840 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 CHL1O00533 1208 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 MAP3K7O43318 606 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 ZNF853P0CG23 659 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
LINC01049-201ENST00000426840 BABAM1Q9NWV8 329 aa9.7□□□□□ -0.86
LINC01049-201ENST00000426840 SALL2Q9Y467 1007 aaPredicted RBP9.7□□□□□ -0.86
LINC01049-201ENST00000426840 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
LINC01049-201ENST00000426840 NGEFQ8N5V2 710 aa9.69□□□□□ -0.86
LINC01049-201ENST00000426840 RREB1Q92766 1687 aa9.69□□□□□ -0.86
LINC01049-201ENST00000426840 KCPQ6ZWJ8 1503 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 EIF4A1P60842 406 aaKnown RBP9.68□□□□□ -0.86
LINC01049-201ENST00000426840 SLC15A2Q16348 729 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 TSR1Q2NL82 804 aaKnown RBP9.68□□□□□ -0.86
LINC01049-201ENST00000426840 NBPF14Q5TI25 921 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 WDR63Q8IWG1 891 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 DNAJC10Q8IXB1 793 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 TTC5Q8N0Z6 440 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 LINC00116Q8NCU8 138 aa9.68□□□□□ -0.86
LINC01049-201ENST00000426840 FMNL2Q96PY5 1086 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms