RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 RAB11FIP3O75154 756 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 SF3A1Q15459 793 aaKnown RBP12.14□□□□□ -0.47
CTCFL-206ENST00000426658 DNAJC2Q99543 621 aaKnown RBP12.14□□□□□ -0.47
CTCFL-206ENST00000426658 ZC3H13Q5T200 1668 aaKnown RBP12.14□□□□□ -0.47
CTCFL-206ENST00000426658 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 KIAA1524Q8TCG1 905 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 DDX11Q96FC9 970 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
CTCFL-206ENST00000426658 KIF20AO95235 890 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 CCDC8Q9H0W5 538 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-206ENST00000426658 SH2B1Q9NRF2 756 aaPredicted RBP12.13□□□□□ -0.47
CTCFL-206ENST00000426658 CPSF1Q10570 1443 aaKnown RBP12.13□□□□□ -0.47
CTCFL-206ENST00000426658 GORABQ5T7V8 394 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 ZNF710Q8N1W2 664 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
CTCFL-206ENST00000426658 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
CTCFL-206ENST00000426658 ATP2B3Q16720 1220 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 TMEM87AQ8NBN3 555 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 SPTLC3Q9NUV7 552 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 PI4KAP2A4QPH2 592 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 MYL6BP14649 208 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 PI4KAP1Q8N8J0 262 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 RAD50Q92878 1312 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 PPLO60437 1756 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 SGSM2O43147 1006 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 GTF2F1P35269 517 aaKnown RBP eCLIP12.12□□□□□ -0.473e-6■■□□□ 13.2
CTCFL-206ENST00000426658 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
CTCFL-206ENST00000426658 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 PHAXQ9H814 394 aaKnown RBP12.12□□□□□ -0.47
CTCFL-206ENST00000426658 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 IFT172Q9UG01 1749 aa12.12□□□□□ -0.47
CTCFL-206ENST00000426658 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 TYRO3Q06418 890 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 TTC21BQ7Z4L5 1316 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 RNF20Q5VTR2 975 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 MPRIPQ6WCQ1 1025 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 PSMA5P28066 241 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 FEZ1Q99689 392 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 CD163L1Q9NR16 1453 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 NRDCO43847 1150 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 AATKQ6ZMQ8 1374 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 RUFY3Q7L099 469 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 CGNQ9P2M7 1197 aaKnown RBP12.11□□□□□ -0.47
CTCFL-206ENST00000426658 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
CTCFL-206ENST00000426658 EPB41L2O43491 1005 aaKnown RBP12.1□□□□□ -0.47
CTCFL-206ENST00000426658 CLIP2Q9UDT6 1046 aa12.1□□□□□ -0.47
CTCFL-206ENST00000426658 PA2G4Q9UQ80 394 aaKnown RBP12.1□□□□□ -0.47
CTCFL-206ENST00000426658 DACT1Q9NYF0 836 aa12.1□□□□□ -0.47
CTCFL-206ENST00000426658 AOX1Q06278 1338 aa12.1□□□□□ -0.47
CTCFL-206ENST00000426658 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
CTCFL-206ENST00000426658 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
CTCFL-206ENST00000426658 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
CTCFL-206ENST00000426658 PTPRMP28827 1452 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 ATP7BP35670 1465 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 ZNF165P49910 485 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 BLOC1S2Q6QNY1 142 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 SMTNL1A8MU46 457 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 FILIP1Q7Z7B0 1213 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 MTMR6Q9Y217 621 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 NEXMIFQ5QGS0 1516 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 ARHGEF40Q8TER5 1519 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 DDX19AQ9NUU7 478 aaKnown RBP12.09□□□□□ -0.47
CTCFL-206ENST00000426658 HDAC5Q9UQL6 1122 aa12.09□□□□□ -0.47
CTCFL-206ENST00000426658 EYA1Q99502 592 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
CTCFL-206ENST00000426658 VPS53Q5VIR6 699 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 CHPF2Q9P2E5 772 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 PPP1R1BQ9UD71 204 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-206ENST00000426658 MAP3K19Q56UN5 1328 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 LRMPQ12912 555 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 PRDM11Q9NQV5 511 aa12.08□□□□□ -0.48
CTCFL-206ENST00000426658 RPAP1Q9BWH6 1393 aaPredicted RBP12.08□□□□□ -0.48
CTCFL-206ENST00000426658 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 TAF3Q5VWG9 929 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 DNAAF4Q8WXU2 420 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 CHMP4AQ9BY43 222 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 DDX58O95786 925 aaKnown RBP12.07□□□□□ -0.48
CTCFL-206ENST00000426658 GUCY1B3Q02153 619 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
CTCFL-206ENST00000426658 CEP135Q66GS9 1140 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms