RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 KIDINS220Q9ULH0 1771 aa12.55□□□□□ -0.4
LINC02554-201ENST00000426467 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
LINC02554-201ENST00000426467 ZNF853P0CG23 659 aa12.55□□□□□ -0.4
LINC02554-201ENST00000426467 CEBPZQ03701 1054 aaKnown RBP12.55□□□□□ -0.4
LINC02554-201ENST00000426467 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
LINC02554-201ENST00000426467 TMX3Q96JJ7 454 aa12.55□□□□□ -0.4
LINC02554-201ENST00000426467 BAG4O95429 457 aaKnown RBP12.55□□□□□ -0.4
LINC02554-201ENST00000426467 CCDC173Q0VFZ6 552 aa12.55□□□□□ -0.4
LINC02554-201ENST00000426467 ZNF396Q96N95 335 aaPredicted RBP12.55□□□□□ -0.4
LINC02554-201ENST00000426467 CDK12Q9NYV4 1490 aaPredicted RBP12.55□□□□□ -0.4
LINC02554-201ENST00000426467 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
LINC02554-201ENST00000426467 IL2RBP14784 551 aa12.54□□□□□ -0.4
LINC02554-201ENST00000426467 IGHMBP2P38935 993 aaKnown RBP12.54□□□□□ -0.4
LINC02554-201ENST00000426467 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
LINC02554-201ENST00000426467 IMMTQ16891 758 aaKnown RBP12.54□□□□□ -0.4
LINC02554-201ENST00000426467 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
LINC02554-201ENST00000426467 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
LINC02554-201ENST00000426467 HOOK1Q9UJC3 728 aaKnown RBP12.54□□□□□ -0.4
LINC02554-201ENST00000426467 DIP2CQ9Y2E4 1556 aa12.54□□□□□ -0.4
LINC02554-201ENST00000426467 LDHAL6AQ6ZMR3 332 aa12.54□□□□□ -0.4
LINC02554-201ENST00000426467 TTC41PQ6P2S7 1318 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 USP26Q9BXU7 913 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 GOLIM4O00461 696 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 XBP1P17861 261 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 POLR1AO95602 1720 aaPredicted RBP12.53□□□□□ -0.4
LINC02554-201ENST00000426467 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 STK38Q15208 465 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 ZNF652Q9Y2D9 606 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 ANKRD18BA2A2Z9 1011 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 MARCH6O60337 910 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 CHMLP26374 656 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
LINC02554-201ENST00000426467 QRICH2Q9H0J4 1663 aa12.52□□□□□ -0.4
LINC02554-201ENST00000426467 FBXW7Q969H0 707 aa12.52□□□□□ -0.4
LINC02554-201ENST00000426467 RTL1A6NKG5 1358 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 KDM4AO75164 1064 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 HMGB1P09429 215 aaKnown RBP12.52□□□□□ -0.41
LINC02554-201ENST00000426467 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 CCDC39Q9UFE4 941 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
LINC02554-201ENST00000426467 TPD52L1Q16890 204 aaPredicted RBP12.52□□□□□ -0.41
LINC02554-201ENST00000426467 AIDAQ96BJ3 306 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 CAMSAP1Q5T5Y3 1602 aa12.52□□□□□ -0.41
LINC02554-201ENST00000426467 CCDC192P0DO97 292 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 BICDL1Q6ZP65 573 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 DDX46Q7L014 1031 aaKnown RBP12.51□□□□□ -0.41
LINC02554-201ENST00000426467 SNRKQ9NRH2 765 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 SYCE3A1L190 88 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 ME1P48163 572 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 TDO2P48775 406 aa12.51□□□□□ -0.41
LINC02554-201ENST00000426467 TULP4Q9NRJ4 1543 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 ATP2B1P20020 1258 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 NAT10Q9H0A0 1025 aaKnown RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 USP44Q9H0E7 712 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 ABCF2Q9UG63 623 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 BICC1Q9H694 974 aaKnown RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 SLC52A2Q9HAB3 445 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 IL15P40933 162 aaPredicted RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 TRIM22Q8IYM9 498 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 DDX17Q92841 729 aaKnown RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 SLC3A2P08195 630 aaKnown RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 RBM8AQ9Y5S9 174 aaKnown RBP12.5□□□□□ -0.41
LINC02554-201ENST00000426467 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
LINC02554-201ENST00000426467 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.49□□□□□ -0.41
LINC02554-201ENST00000426467 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 STX6O43752 255 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 TPM3P06753 285 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 TRIM5Q9C035 493 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 KCNQ3O43525 872 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 STK11IPQ8N1F8 1099 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
LINC02554-201ENST00000426467 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
LINC02554-201ENST00000426467 CDKL5O76039 1030 aa12.49□□□□□ -0.41
LINC02554-201ENST00000426467 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
LINC02554-201ENST00000426467 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 NEK1Q96PY6 1258 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 GDPD2Q9HCC8 539 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 MED14O60244 1454 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 NEXMIFQ5QGS0 1516 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 MAP3K12Q12852 859 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 NGLY1Q96IV0 654 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 METTL22Q9BUU2 404 aaPredicted RBP12.48□□□□□ -0.41
LINC02554-201ENST00000426467 NUP62CLQ9H1M0 184 aa12.48□□□□□ -0.41
LINC02554-201ENST00000426467 PES1O00541 588 aaKnown RBP12.48□□□□□ -0.41
LINC02554-201ENST00000426467 ZNF213O14771 459 aa12.47□□□□□ -0.41
LINC02554-201ENST00000426467 GJB2P29033 226 aa12.47□□□□□ -0.41
LINC02554-201ENST00000426467 RAB3GAP1Q15042 981 aa12.47□□□□□ -0.41
LINC02554-201ENST00000426467 KIAA1210Q9ULL0 1709 aa12.47□□□□□ -0.41
LINC02554-201ENST00000426467 RAD21O60216 631 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms