RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 BMP2KLQ5H9B9 411 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 IP6K1Q92551 441 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 ZNF592Q92610 1267 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
SP1-202ENST00000426431 NLRP3Q96P20 1036 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 NBPF14Q5TI25 921 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 MYO5CQ9NQX4 1742 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 HSP90B2PQ58FF3 399 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 KSR2Q6VAB6 950 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 CRNKL1Q9BZJ0 848 aaKnown RBP11.89□□□□□ -0.51
SP1-202ENST00000426431 PLXNC1O60486 1568 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 PRPF40AO75400 957 aaKnown RBP11.89□□□□□ -0.51
SP1-202ENST00000426431 TRIM27P14373 513 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
SP1-202ENST00000426431 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 ANKRD18AQ8IVF6 992 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 SLC12A7Q9Y666 1083 aa11.89□□□□□ -0.51
SP1-202ENST00000426431 CTAGE5O15320 804 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 ERLIN2O94905 339 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 C6orf229H3BNL8 230 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 PLCG2P16885 1265 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 HDAC1Q13547 482 aaPredicted RBP11.88□□□□□ -0.51
SP1-202ENST00000426431 HSP90AA2PQ14568 343 aaPredicted RBP11.88□□□□□ -0.51
SP1-202ENST00000426431 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 ZFYVE27Q5T4F4 411 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 LRRC27Q9C0I9 530 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.88□□□□□ -0.51
SP1-202ENST00000426431 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 CNNM2Q9H8M5 875 aa11.88□□□□□ -0.51
SP1-202ENST00000426431 RBM27Q9P2N5 1060 aaKnown RBP11.88□□□□□ -0.51
SP1-202ENST00000426431 BMP15O95972 392 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 SERPINC1P01008 464 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
SP1-202ENST00000426431 PI4KAP2A4QPH2 592 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 IQCEQ6IPM2 695 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 PI4KAP1Q8N8J0 262 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 CAGE1Q8TC20 777 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 GNAQP50148 359 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 BAG4O95429 457 aaKnown RBP11.87□□□□□ -0.51
SP1-202ENST00000426431 STK3Q13188 491 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 TPTE2Q6XPS3 522 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 CERS3Q8IU89 383 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 NUP62CLQ9H1M0 184 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 ANKRD2Q9GZV1 360 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 LIMCH1Q9UPQ0 1083 aa11.87□□□□□ -0.51
SP1-202ENST00000426431 UBE3BQ7Z3V4 1068 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 MINDY4BA8MYZ0 360 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 GCP02774 474 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 INSRP06213 1382 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 GNAT2P19087 354 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 FAM43AQ8N2R8 423 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 KRT23Q9C075 422 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 EIF4A2Q14240 407 aaKnown RBP11.86□□□□□ -0.51
SP1-202ENST00000426431 UTP14AQ9BVJ6 771 aaKnown RBP11.86□□□□□ -0.51
SP1-202ENST00000426431 POLD1P28340 1107 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 SSRP1Q08945 709 aaKnown RBP11.86□□□□□ -0.51
SP1-202ENST00000426431 C8orf76Q96K31 380 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 GRM8O00222 908 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
SP1-202ENST00000426431 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 EYA3Q99504 573 aa11.86□□□□□ -0.51
SP1-202ENST00000426431 STXBP4Q6ZWJ1 553 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 TSG101Q99816 390 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 RTCBQ9Y3I0 505 aaKnown RBP11.85□□□□□ -0.51
SP1-202ENST00000426431 B4DLN1 442 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 CAVIN2O95810 425 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 MRPL12P52815 198 aaKnown RBP11.85□□□□□ -0.51
SP1-202ENST00000426431 CHRNA2Q15822 529 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 CCDC85AQ96PX6 553 aaPredicted RBP11.85□□□□□ -0.51
SP1-202ENST00000426431 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 ZNF397Q8NF99 534 aaPredicted RBP11.85□□□□□ -0.51
SP1-202ENST00000426431 DEF6Q9H4E7 631 aa11.85□□□□□ -0.51
SP1-202ENST00000426431 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 AMPD3Q01432 767 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 PRPF40BQ6NWY9 871 aaKnown RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 NCOA7Q8NI08 942 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 CCDC194A0A1B0GVG4 234 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 TARBP1Q13395 1621 aaKnown RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 COL17A1Q9UMD9 1497 aaPredicted RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 IFIT3O14879 490 aaKnown RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 GPTP24298 496 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 CETN2P41208 172 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 GTPBP4Q9BZE4 634 aaKnown RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 TTC41PQ6P2S7 1318 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 ANAPC15P60006 121 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 KANK3Q6NY19 840 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 MFSD6Q6ZSS7 791 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 ZHX3Q9H4I2 956 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
SP1-202ENST00000426431 TMEM2Q9UHN6 1383 aa11.84□□□□□ -0.51
SP1-202ENST00000426431 F6X3S4 739 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms