RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 FGD1P98174 961 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 TEFQ10587 303 aa16.21■□□□□ 0.19
USP42-203ENST00000426246 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
USP42-203ENST00000426246 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
USP42-203ENST00000426246 KDM4AO75164 1064 aa16.2■□□□□ 0.18
USP42-203ENST00000426246 PLEKHO1Q53GL0 409 aaPredicted RBP16.2■□□□□ 0.18
USP42-203ENST00000426246 C17orf53Q8N3J3 647 aaPredicted RBP16.2■□□□□ 0.18
USP42-203ENST00000426246 SPC24Q8NBT2 197 aa16.2■□□□□ 0.18
USP42-203ENST00000426246 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
USP42-203ENST00000426246 HAP1P54257 671 aaPredicted RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 PARP4Q9UKK3 1724 aaKnown RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 CEBPZQ03701 1054 aaKnown RBP16.19■□□□□ 0.18
USP42-203ENST00000426246 TSC1Q92574 1164 aa16.18■□□□□ 0.18
USP42-203ENST00000426246 DIAPH3Q9NSV4 1193 aa16.18■□□□□ 0.18
USP42-203ENST00000426246 GADD45BO75293 160 aaPredicted RBP16.18■□□□□ 0.18
USP42-203ENST00000426246 CLCN1P35523 988 aa16.18■□□□□ 0.18
USP42-203ENST00000426246 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
USP42-203ENST00000426246 MYL6BP14649 208 aa16.18■□□□□ 0.18
USP42-203ENST00000426246 RNMTO43148 476 aaKnown RBP16.17■□□□□ 0.18
USP42-203ENST00000426246 KCNQ3O43525 872 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 FAM173BQ6P4H8 233 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 TMEM63CQ9P1W3 806 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
USP42-203ENST00000426246 MRC1P22897 1456 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 PI4KAP2A4QPH2 592 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 CCDC30Q5VVM6 783 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 PI4KAP1Q8N8J0 262 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 NECAB1Q8N987 351 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 NDUFB9Q9Y6M9 179 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 KLHL40Q2TBA0 621 aa16.17■□□□□ 0.18
USP42-203ENST00000426246 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
USP42-203ENST00000426246 CCDC8Q9H0W5 538 aaPredicted RBP16.16■□□□□ 0.18
USP42-203ENST00000426246 CAMK4Q16566 473 aa16.16■□□□□ 0.18
USP42-203ENST00000426246 GPT2Q8TD30 523 aa16.16■□□□□ 0.18
USP42-203ENST00000426246 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
USP42-203ENST00000426246 SOS1Q07889 1333 aaPredicted RBP16.16■□□□□ 0.18
USP42-203ENST00000426246 USP25Q9UHP3 1055 aa16.15■□□□□ 0.18
USP42-203ENST00000426246 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
USP42-203ENST00000426246 DRC7Q8IY82 874 aa16.15■□□□□ 0.18
USP42-203ENST00000426246 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
USP42-203ENST00000426246 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
USP42-203ENST00000426246 NBPF7P0C2Y1 421 aaPredicted RBP16.15■□□□□ 0.18
USP42-203ENST00000426246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.15■□□□□ 0.18
USP42-203ENST00000426246 PTPRCP08575 1304 aa16.15■□□□□ 0.18
USP42-203ENST00000426246 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 GLI3P10071 1580 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
USP42-203ENST00000426246 CCDC173Q0VFZ6 552 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
USP42-203ENST00000426246 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
USP42-203ENST00000426246 SMC3Q9UQE7 1217 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 CNPY2Q9Y2B0 182 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 C5P01031 1676 aa16.14■□□□□ 0.17
USP42-203ENST00000426246 GNAI3P08754 354 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 IL25Q9H293 177 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 IFIT2P09913 472 aaKnown RBP16.13■□□□□ 0.17
USP42-203ENST00000426246 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
USP42-203ENST00000426246 PHKG2P15735 406 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 ZSCAN30Q86W11 494 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 SRCIN1Q9C0H9 1055 aa16.13■□□□□ 0.17
USP42-203ENST00000426246 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
USP42-203ENST00000426246 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
USP42-203ENST00000426246 C1orf141Q5JVX7 400 aa16.12■□□□□ 0.17
USP42-203ENST00000426246 CYP27B1O15528 508 aa16.12■□□□□ 0.17
USP42-203ENST00000426246 BOLA2Q9H3K6 86 aa16.12■□□□□ 0.17
USP42-203ENST00000426246 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
USP42-203ENST00000426246 PRDM10Q9NQV6 1147 aa16.12■□□□□ 0.17
USP42-203ENST00000426246 COL14A1Q05707 1796 aaKnown RBP16.11■□□□□ 0.17
USP42-203ENST00000426246 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
USP42-203ENST00000426246 GIMAP6Q6P9H5 292 aa16.11■□□□□ 0.17
USP42-203ENST00000426246 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
USP42-203ENST00000426246 TFIP11Q9UBB9 837 aaKnown RBP16.11■□□□□ 0.17
USP42-203ENST00000426246 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
USP42-203ENST00000426246 TTC12Q9H892 705 aaPredicted RBP16.11■□□□□ 0.17
USP42-203ENST00000426246 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
USP42-203ENST00000426246 HSP90B1P14625 803 aaKnown RBP16.11■□□□□ 0.17
USP42-203ENST00000426246 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
USP42-203ENST00000426246 ATP10DQ9P241 1426 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
USP42-203ENST00000426246 CHMLP26374 656 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 USP48Q86UV5 1035 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 PHLPP1O60346 1717 aa16.1■□□□□ 0.17
USP42-203ENST00000426246 HOXB7P09629 217 aa16.09■□□□□ 0.17
USP42-203ENST00000426246 AACSQ86V21 672 aa16.09■□□□□ 0.17
USP42-203ENST00000426246 LRRC2Q9BYS8 371 aa16.09■□□□□ 0.17
USP42-203ENST00000426246 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
USP42-203ENST00000426246 EDC3Q96F86 508 aaKnown RBP16.09■□□□□ 0.17
USP42-203ENST00000426246 DDX11Q96FC9 970 aa16.09■□□□□ 0.17
USP42-203ENST00000426246 UQCRHLA0A096LP55 91 aa16.08■□□□□ 0.17
USP42-203ENST00000426246 UQCRHP07919 91 aa16.08■□□□□ 0.17
USP42-203ENST00000426246 TSPY26PQ9H489 355 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms