RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 GRM8O00222 908 aa17.91■□□□□ 0.46
CDK3-201ENST00000425876 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
CDK3-201ENST00000425876 CWF19L2Q2TBE0 894 aaKnown RBP17.9■□□□□ 0.46
CDK3-201ENST00000425876 STARD3NLO95772 234 aa17.89■□□□□ 0.45
CDK3-201ENST00000425876 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.45
CDK3-201ENST00000425876 MARCH10Q8NA82 808 aaPredicted RBP17.89■□□□□ 0.45
CDK3-201ENST00000425876 A1BGP04217 495 aa17.88■□□□□ 0.45
CDK3-201ENST00000425876 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
CDK3-201ENST00000425876 GCKRQ14397 625 aa17.88■□□□□ 0.45
CDK3-201ENST00000425876 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
CDK3-201ENST00000425876 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
CDK3-201ENST00000425876 MYD88Q99836 296 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 COL15A1P39059 1388 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 DOT1LQ8TEK3 1739 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 BRWD3Q6RI45 1802 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 LRRCC1Q9C099 1032 aa17.87■□□□□ 0.45
CDK3-201ENST00000425876 THSD7AQ9UPZ6 1657 aa17.86■□□□□ 0.45
CDK3-201ENST00000425876 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
CDK3-201ENST00000425876 SRGAP3O43295 1099 aa17.86■□□□□ 0.45
CDK3-201ENST00000425876 HSP90AB4PQ58FF6 505 aa17.86■□□□□ 0.45
CDK3-201ENST00000425876 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
CDK3-201ENST00000425876 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
CDK3-201ENST00000425876 FAM98CQ17RN3 349 aaKnown RBP17.85■□□□□ 0.45
CDK3-201ENST00000425876 OSBPL3Q9H4L5 887 aa17.85■□□□□ 0.45
CDK3-201ENST00000425876 NOP58Q9Y2X3 529 aaKnown RBP17.85■□□□□ 0.45
CDK3-201ENST00000425876 EP400Q96L91 3159 aa17.84■□□□□ 0.45
CDK3-201ENST00000425876 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
CDK3-201ENST00000425876 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
CDK3-201ENST00000425876 SMARCA5O60264 1052 aaPredicted RBP17.83■□□□□ 0.45
CDK3-201ENST00000425876 CYP19A1P11511 503 aaPredicted RBP17.83■□□□□ 0.45
CDK3-201ENST00000425876 KAZALD1Q96I82 304 aa17.83■□□□□ 0.45
CDK3-201ENST00000425876 SUCLG2Q96I99 432 aa17.83■□□□□ 0.45
CDK3-201ENST00000425876 IPO9Q96P70 1041 aaKnown RBP17.83■□□□□ 0.45
CDK3-201ENST00000425876 SLC4A9Q96Q91 983 aa17.83■□□□□ 0.45
CDK3-201ENST00000425876 NUP188Q5SRE5 1749 aa17.83■□□□□ 0.44
CDK3-201ENST00000425876 C16orf71Q8IYS4 520 aaPredicted RBP17.83■□□□□ 0.44
CDK3-201ENST00000425876 SALL3Q9BXA9 1300 aa17.82■□□□□ 0.44
CDK3-201ENST00000425876 APBB1O00213 710 aa17.82■□□□□ 0.44
CDK3-201ENST00000425876 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
CDK3-201ENST00000425876 SURF6O75683 361 aaKnown RBP17.82■□□□□ 0.44
CDK3-201ENST00000425876 SEC24BO95487 1268 aa17.82■□□□□ 0.44
CDK3-201ENST00000425876 TTC22Q5TAA0 569 aa17.82■□□□□ 0.44
CDK3-201ENST00000425876 NPM2Q86SE8 214 aaKnown RBP17.82■□□□□ 0.44
CDK3-201ENST00000425876 SEPT12Q8IYM1 358 aa17.82■□□□□ 0.44
CDK3-201ENST00000425876 UPF2Q9HAU5 1272 aaKnown RBP17.82■□□□□ 0.44
CDK3-201ENST00000425876 KAT6BQ8WYB5 2073 aa17.81■□□□□ 0.44
CDK3-201ENST00000425876 CCDC191Q8NCU4 936 aa17.81■□□□□ 0.44
CDK3-201ENST00000425876 SMARCC1Q92922 1105 aaPredicted RBP17.81■□□□□ 0.44
CDK3-201ENST00000425876 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
CDK3-201ENST00000425876 BICC1Q9H694 974 aaKnown RBP17.81■□□□□ 0.44
CDK3-201ENST00000425876 CICQ96RK0 1608 aaPredicted RBP17.8■□□□□ 0.44
CDK3-201ENST00000425876 EIF5BO60841 1220 aaKnown RBP17.8■□□□□ 0.44
CDK3-201ENST00000425876 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
CDK3-201ENST00000425876 OTUD7AQ8TE49 926 aaPredicted RBP17.8■□□□□ 0.44
CDK3-201ENST00000425876 A0A0G2JS52 829 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 H7C1W4 665 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
CDK3-201ENST00000425876 PDE1AP54750 535 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 CASP7P55210 303 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 MYT1Q01538 1121 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 ERC1Q8IUD2 1116 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 DDRGK1Q96HY6 314 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 CWC25Q9NXE8 425 aaPredicted RBP17.79■□□□□ 0.44
CDK3-201ENST00000425876 STAP2Q9UGK3 403 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
CDK3-201ENST00000425876 TJP1Q07157 1748 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 A0A087WZG4 1122 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 ATP5J2-PTCD1G3V325 749 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 RABL6Q3YEC7 729 aaPredicted RBP17.79■□□□□ 0.44
CDK3-201ENST00000425876 KIF6Q6ZMV9 814 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 RHPN1Q8TCX5 695 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 ACSBG1Q96GR2 724 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
CDK3-201ENST00000425876 AOX1Q06278 1338 aa17.78■□□□□ 0.44
CDK3-201ENST00000425876 IL6STP40189 918 aaPredicted RBP17.78■□□□□ 0.44
CDK3-201ENST00000425876 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
CDK3-201ENST00000425876 UPF1Q92900 1129 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK3-201ENST00000425876 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
CDK3-201ENST00000425876 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
CDK3-201ENST00000425876 CDC45O75419 566 aa17.77■□□□□ 0.44
CDK3-201ENST00000425876 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
CDK3-201ENST00000425876 LOC102724428A0A0B4J2F2 783 aa17.76■□□□□ 0.43
CDK3-201ENST00000425876 MX1P20591 662 aa17.76■□□□□ 0.43
CDK3-201ENST00000425876 SIK1P57059 783 aa17.76■□□□□ 0.43
CDK3-201ENST00000425876 UBE3BQ7Z3V4 1068 aa17.76■□□□□ 0.43
CDK3-201ENST00000425876 ZNF831Q5JPB2 1677 aa17.76■□□□□ 0.43
CDK3-201ENST00000425876 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
CDK3-201ENST00000425876 EPHA10Q5JZY3 1008 aa17.75■□□□□ 0.43
CDK3-201ENST00000425876 GIGYF2Q6Y7W6 1299 aaKnown RBP17.75■□□□□ 0.43
CDK3-201ENST00000425876 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
CDK3-201ENST00000425876 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
CDK3-201ENST00000425876 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
CDK3-201ENST00000425876 MSH5O43196 834 aa17.74■□□□□ 0.43
CDK3-201ENST00000425876 TBC1D9Q6ZT07 1266 aa17.74■□□□□ 0.43
CDK3-201ENST00000425876 COPRSQ9NQ92 184 aa17.74■□□□□ 0.43
CDK3-201ENST00000425876 ATP6V1AP38606 617 aa17.74■□□□□ 0.43
CDK3-201ENST00000425876 OS9Q13438 667 aaPredicted RBP17.74■□□□□ 0.43
CDK3-201ENST00000425876 CCDC87Q9NVE4 849 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms