RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 RRAGCQ9HB90 399 aa17.57■□□□□ 0.4
CCDC12-202ENST00000425441 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
CCDC12-202ENST00000425441 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
CCDC12-202ENST00000425441 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
CCDC12-202ENST00000425441 PDE6BP35913 854 aa17.56■□□□□ 0.4
CCDC12-202ENST00000425441 RASSF7Q02833 373 aa17.56■□□□□ 0.4
CCDC12-202ENST00000425441 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
CCDC12-202ENST00000425441 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
CCDC12-202ENST00000425441 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
CCDC12-202ENST00000425441 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
CCDC12-202ENST00000425441 TIAM2Q8IVF5 1701 aa17.55■□□□□ 0.4
CCDC12-202ENST00000425441 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
CCDC12-202ENST00000425441 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
CCDC12-202ENST00000425441 TBC1D2BQ9UPU7 963 aa17.54■□□□□ 0.4
CCDC12-202ENST00000425441 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
CCDC12-202ENST00000425441 BCORQ6W2J9 1755 aa17.53■□□□□ 0.4
CCDC12-202ENST00000425441 NPHP1O15259 732 aa17.53■□□□□ 0.4
CCDC12-202ENST00000425441 CHADLQ6NUI6 762 aa17.53■□□□□ 0.4
CCDC12-202ENST00000425441 DNAJC5GQ8N7S2 189 aa17.53■□□□□ 0.4
CCDC12-202ENST00000425441 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
CCDC12-202ENST00000425441 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
CCDC12-202ENST00000425441 CCDC88AQ3V6T2 1871 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 GLTPD2A6NH11 291 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 A1BGP04217 495 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 ST5P78524 1137 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 ZNF622Q969S3 477 aaKnown RBP eCLIP17.52■□□□□ 0.49e-7■■□□□ 11.5
CCDC12-202ENST00000425441 PHACTR3Q96KR7 559 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
CCDC12-202ENST00000425441 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
CCDC12-202ENST00000425441 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
CCDC12-202ENST00000425441 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-202ENST00000425441 NFKBIEO00221 500 aa17.5■□□□□ 0.39
CCDC12-202ENST00000425441 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
CCDC12-202ENST00000425441 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
CCDC12-202ENST00000425441 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
CCDC12-202ENST00000425441 DPY19L2Q6NUT2 758 aa17.5■□□□□ 0.39
CCDC12-202ENST00000425441 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
CCDC12-202ENST00000425441 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
CCDC12-202ENST00000425441 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
CCDC12-202ENST00000425441 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
CCDC12-202ENST00000425441 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
CCDC12-202ENST00000425441 ZNF652Q9Y2D9 606 aa17.49■□□□□ 0.39
CCDC12-202ENST00000425441 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 KCNQ3O43525 872 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 C21orf2O43822 256 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 PPP2R1AP30153 589 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 PRELPP51888 382 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 CLEC4GQ6UXB4 293 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
CCDC12-202ENST00000425441 DICER1Q9UPY3 1922 aaKnown RBP17.48■□□□□ 0.39
CCDC12-202ENST00000425441 NEFMP07197 916 aa17.47■□□□□ 0.39
CCDC12-202ENST00000425441 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
CCDC12-202ENST00000425441 RGL2O15211 777 aa17.46■□□□□ 0.39
CCDC12-202ENST00000425441 ERFEQ4G0M1 354 aa17.46■□□□□ 0.39
CCDC12-202ENST00000425441 CCDC24Q8N4L8 307 aa17.46■□□□□ 0.39
CCDC12-202ENST00000425441 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
CCDC12-202ENST00000425441 CACNA1SQ13698 1873 aa17.46■□□□□ 0.38
CCDC12-202ENST00000425441 GABBR2O75899 941 aa17.45■□□□□ 0.38
CCDC12-202ENST00000425441 MCM10Q7L590 875 aa17.45■□□□□ 0.38
CCDC12-202ENST00000425441 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
CCDC12-202ENST00000425441 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
CCDC12-202ENST00000425441 SRGNP10124 158 aa17.44■□□□□ 0.38
CCDC12-202ENST00000425441 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
CCDC12-202ENST00000425441 LAMB4A4D0S4 1761 aa17.43■□□□□ 0.38
CCDC12-202ENST00000425441 HTRA3P83110 453 aa17.43■□□□□ 0.38
CCDC12-202ENST00000425441 TAF7Q15545 349 aaPredicted RBP17.43■□□□□ 0.38
CCDC12-202ENST00000425441 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
CCDC12-202ENST00000425441 PRAMEF22A3QJZ6 481 aa17.42■□□□□ 0.38
CCDC12-202ENST00000425441 PIP4K2AP48426 406 aaPredicted RBP17.42■□□□□ 0.38
CCDC12-202ENST00000425441 TPTE2Q6XPS3 522 aa17.42■□□□□ 0.38
CCDC12-202ENST00000425441 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
CCDC12-202ENST00000425441 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
CCDC12-202ENST00000425441 NPR1P16066 1061 aa17.41■□□□□ 0.38
CCDC12-202ENST00000425441 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
CCDC12-202ENST00000425441 CEP350Q5VT06 3117 aa17.41■□□□□ 0.38
CCDC12-202ENST00000425441 CCDC93Q567U6 631 aa17.4■□□□□ 0.38
CCDC12-202ENST00000425441 NIP7Q9Y221 180 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC12-202ENST00000425441 POTECB2RU33 542 aa17.39■□□□□ 0.37
CCDC12-202ENST00000425441 KDM3BQ7LBC6 1761 aa17.38■□□□□ 0.37
CCDC12-202ENST00000425441 KLRG2A4D1S0 409 aaPredicted RBP17.38■□□□□ 0.37
CCDC12-202ENST00000425441 NBPF26B4DH59 902 aa17.38■□□□□ 0.37
CCDC12-202ENST00000425441 NBPF10Q6P3W6 841 aaKnown RBP17.38■□□□□ 0.37
CCDC12-202ENST00000425441 NBPF15Q8N660 670 aa17.38■□□□□ 0.37
CCDC12-202ENST00000425441 PNNQ9H307 717 aaKnown RBP17.38■□□□□ 0.37
CCDC12-202ENST00000425441 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
CCDC12-202ENST00000425441 IQCA1LA6NCM1 817 aa17.37■□□□□ 0.37
CCDC12-202ENST00000425441 GTF2E1P29083 439 aaPredicted RBP17.37■□□□□ 0.37
CCDC12-202ENST00000425441 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
CCDC12-202ENST00000425441 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC12-202ENST00000425441 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
CCDC12-202ENST00000425441 NYXQ9GZU5 481 aa17.36■□□□□ 0.37
CCDC12-202ENST00000425441 SCN4AP35499 1836 aa17.35■□□□□ 0.37
CCDC12-202ENST00000425441 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
CCDC12-202ENST00000425441 DDNO94850 711 aaPredicted RBP17.35■□□□□ 0.37
CCDC12-202ENST00000425441 C7orf43Q8WVR3 580 aa17.35■□□□□ 0.37
CCDC12-202ENST00000425441 ERVV-1B6SEH8 477 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms