RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
HDAC11-210ENST00000425430 SLX4Q8IY92 1834 aa20.33■□□□□ 0.85
HDAC11-210ENST00000425430 A1BGP04217 495 aa20.33■□□□□ 0.85
HDAC11-210ENST00000425430 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
HDAC11-210ENST00000425430 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
HDAC11-210ENST00000425430 U2AF1L5P0DN76 240 aaPredicted RBP20.32■□□□□ 0.84
HDAC11-210ENST00000425430 U2AF1Q01081 240 aaKnown RBP eCLIP20.32■□□□□ 0.84
HDAC11-210ENST00000425430 LTBP3Q9NS15 1303 aa20.31■□□□□ 0.84
HDAC11-210ENST00000425430 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
HDAC11-210ENST00000425430 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
HDAC11-210ENST00000425430 DZIP3Q86Y13 1208 aaKnown RBP20.31■□□□□ 0.84
HDAC11-210ENST00000425430 CNKSR1Q969H4 720 aa20.31■□□□□ 0.84
HDAC11-210ENST00000425430 PIP4K2AP48426 406 aaPredicted RBP20.3■□□□□ 0.84
HDAC11-210ENST00000425430 STYK1Q6J9G0 422 aa20.3■□□□□ 0.84
HDAC11-210ENST00000425430 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
HDAC11-210ENST00000425430 BTBD11A6QL63 1104 aa20.29■□□□□ 0.84
HDAC11-210ENST00000425430 KCNQ3O43525 872 aa20.29■□□□□ 0.84
HDAC11-210ENST00000425430 DDNO94850 711 aaPredicted RBP20.29■□□□□ 0.84
HDAC11-210ENST00000425430 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
HDAC11-210ENST00000425430 MKRN1Q9UHC7 482 aaKnown RBP20.29■□□□□ 0.84
HDAC11-210ENST00000425430 CEMIPQ8WUJ3 1361 aa20.29■□□□□ 0.84
HDAC11-210ENST00000425430 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
HDAC11-210ENST00000425430 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
HDAC11-210ENST00000425430 SRGNP10124 158 aa20.28■□□□□ 0.84
HDAC11-210ENST00000425430 SOGA3Q5TF21 947 aa20.28■□□□□ 0.84
HDAC11-210ENST00000425430 MASTLQ96GX5 879 aa20.28■□□□□ 0.84
HDAC11-210ENST00000425430 RALBP1Q15311 655 aa20.27■□□□□ 0.84
HDAC11-210ENST00000425430 CREBZFQ9NS37 354 aa20.27■□□□□ 0.84
HDAC11-210ENST00000425430 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
HDAC11-210ENST00000425430 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
HDAC11-210ENST00000425430 ZNF652Q9Y2D9 606 aa20.25■□□□□ 0.83
HDAC11-210ENST00000425430 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
HDAC11-210ENST00000425430 CCDC93Q567U6 631 aa20.24■□□□□ 0.83
HDAC11-210ENST00000425430 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
HDAC11-210ENST00000425430 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
HDAC11-210ENST00000425430 PLEKHF1Q96S99 279 aa20.23■□□□□ 0.83
HDAC11-210ENST00000425430 SCN4AP35499 1836 aa20.23■□□□□ 0.83
HDAC11-210ENST00000425430 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
HDAC11-210ENST00000425430 FAM177BA6PVY3 158 aa20.21■□□□□ 0.83
HDAC11-210ENST00000425430 NPR1P16066 1061 aa20.21■□□□□ 0.83
HDAC11-210ENST00000425430 DCTN1Q14203 1278 aa20.21■□□□□ 0.83
HDAC11-210ENST00000425430 MCM10Q7L590 875 aa20.21■□□□□ 0.83
HDAC11-210ENST00000425430 LDHDQ86WU2 507 aa20.21■□□□□ 0.83
HDAC11-210ENST00000425430 RTF1Q92541 710 aaKnown RBP20.21■□□□□ 0.83
HDAC11-210ENST00000425430 SNRPA1P09661 255 aaKnown RBP20.2■□□□□ 0.82
HDAC11-210ENST00000425430 EAPPQ56P03 285 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-210ENST00000425430 CLEC4GQ6UXB4 293 aa20.2■□□□□ 0.82
HDAC11-210ENST00000425430 TAF1DQ9H5J8 278 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-210ENST00000425430 ZNF277Q9NRM2 450 aaPredicted RBP20.2■□□□□ 0.82
HDAC11-210ENST00000425430 NIP7Q9Y221 180 aaKnown RBP eCLIP20.2■□□□□ 0.82
HDAC11-210ENST00000425430 ZNF541Q9H0D2 1346 aa20.2■□□□□ 0.82
HDAC11-210ENST00000425430 CNTNAP1P78357 1384 aa20.2■□□□□ 0.82
HDAC11-210ENST00000425430 FKBP4Q02790 459 aaKnown RBP eCLIP20.19■□□□□ 0.82
HDAC11-210ENST00000425430 C7orf43Q8WVR3 580 aa20.19■□□□□ 0.82
HDAC11-210ENST00000425430 L3MBTL3Q96JM7 780 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-210ENST00000425430 PRKRIP1Q9H875 184 aaPredicted RBP20.19■□□□□ 0.82
HDAC11-210ENST00000425430 OLFM4Q6UX06 510 aa20.18■□□□□ 0.82
HDAC11-210ENST00000425430 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
HDAC11-210ENST00000425430 TPTE2Q6XPS3 522 aa20.17■□□□□ 0.82
HDAC11-210ENST00000425430 PASKQ96RG2 1323 aa20.17■□□□□ 0.82
HDAC11-210ENST00000425430 NBPF26B4DH59 902 aa20.16■□□□□ 0.82
HDAC11-210ENST00000425430 FOXN1O15353 648 aa20.16■□□□□ 0.82
HDAC11-210ENST00000425430 NBPF10Q6P3W6 841 aaKnown RBP20.16■□□□□ 0.82
HDAC11-210ENST00000425430 NBPF15Q8N660 670 aa20.16■□□□□ 0.82
HDAC11-210ENST00000425430 HACL1Q9UJ83 578 aa20.16■□□□□ 0.82
HDAC11-210ENST00000425430 CLEC11AQ9Y240 323 aa20.16■□□□□ 0.82
HDAC11-210ENST00000425430 GTF2E1P29083 439 aaPredicted RBP20.15■□□□□ 0.82
HDAC11-210ENST00000425430 RTKN2Q8IZC4 609 aa20.15■□□□□ 0.82
HDAC11-210ENST00000425430 AIDAQ96BJ3 306 aa20.15■□□□□ 0.82
HDAC11-210ENST00000425430 ADAMTSL1Q8N6G6 1762 aa20.14■□□□□ 0.81
HDAC11-210ENST00000425430 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
HDAC11-210ENST00000425430 ZNF316A6NFI3 1004 aaPredicted RBP20.14■□□□□ 0.81
HDAC11-210ENST00000425430 TMEM88BA6NKF7 163 aa20.14■□□□□ 0.81
HDAC11-210ENST00000425430 EPHX2P34913 555 aa20.14■□□□□ 0.81
HDAC11-210ENST00000425430 KLRG2A4D1S0 409 aaPredicted RBP20.13■□□□□ 0.81
HDAC11-210ENST00000425430 IARSP41252 1262 aaKnown RBP20.13■□□□□ 0.81
HDAC11-210ENST00000425430 HLFQ16534 295 aa20.13■□□□□ 0.81
HDAC11-210ENST00000425430 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
HDAC11-210ENST00000425430 ABCC12Q96J65 1359 aa20.12■□□□□ 0.81
HDAC11-210ENST00000425430 VEGFBP49765 207 aa20.12■□□□□ 0.81
HDAC11-210ENST00000425430 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
HDAC11-210ENST00000425430 RGL2O15211 777 aa20.11■□□□□ 0.81
HDAC11-210ENST00000425430 ITGBL1O95965 494 aaPredicted RBP20.11■□□□□ 0.81
HDAC11-210ENST00000425430 ALDH1B1P30837 517 aa20.11■□□□□ 0.81
HDAC11-210ENST00000425430 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
HDAC11-210ENST00000425430 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
HDAC11-210ENST00000425430 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
HDAC11-210ENST00000425430 CCDC184Q52MB2 194 aa20.1■□□□□ 0.81
HDAC11-210ENST00000425430 NUTM1Q86Y26 1132 aa20.1■□□□□ 0.81
HDAC11-210ENST00000425430 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
HDAC11-210ENST00000425430 MIS18AQ9NYP9 233 aa20.1■□□□□ 0.81
HDAC11-210ENST00000425430 KDM3BQ7LBC6 1761 aa20.1■□□□□ 0.81
HDAC11-210ENST00000425430 CTCFP49711 727 aaPredicted RBP20.09■□□□□ 0.81
HDAC11-210ENST00000425430 MAP1SQ66K74 1059 aaPredicted RBP20.09■□□□□ 0.81
HDAC11-210ENST00000425430 PNMA8AQ86V59 439 aaPredicted RBP20.09■□□□□ 0.81
HDAC11-210ENST00000425430 PRDM10Q9NQV6 1147 aa20.09■□□□□ 0.81
HDAC11-210ENST00000425430 NUP98P52948 1817 aa20.09■□□□□ 0.81
HDAC11-210ENST00000425430 FZD9O00144 591 aa20.08■□□□□ 0.81
HDAC11-210ENST00000425430 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
HDAC11-210ENST00000425430 GPC2Q8N158 579 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms