RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 TJP1Q07157 1748 aa16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
HLA-DQB3-203ENST00000425319 DDNO94850 711 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB3-203ENST00000425319 USP16Q9Y5T5 823 aa16.31■□□□□ 0.2
HLA-DQB3-203ENST00000425319 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PNISRQ8TF01 805 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 JDP2Q8WYK2 163 aa16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 AIDAQ96BJ3 306 aa16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PNNQ9H307 717 aaKnown RBP16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
HLA-DQB3-203ENST00000425319 BRCA1P38398 1863 aaKnown RBP16.29■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PRELPP51888 382 aa16.29■□□□□ 0.2
HLA-DQB3-203ENST00000425319 TAF7Q15545 349 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PNMA8AQ86V59 439 aaPredicted RBP16.29■□□□□ 0.2
HLA-DQB3-203ENST00000425319 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
HLA-DQB3-203ENST00000425319 POTECB2RU33 542 aa16.28■□□□□ 0.2
HLA-DQB3-203ENST00000425319 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
HLA-DQB3-203ENST00000425319 GRIPAP1Q4V328 841 aa16.28■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
HLA-DQB3-203ENST00000425319 EAPPQ56P03 285 aaPredicted RBP16.27■□□□□ 0.2
HLA-DQB3-203ENST00000425319 PHACTR3Q96KR7 559 aa16.27■□□□□ 0.2
HLA-DQB3-203ENST00000425319 RSPH6AQ9H0K4 717 aa16.27■□□□□ 0.2
HLA-DQB3-203ENST00000425319 MKRN1Q9UHC7 482 aaKnown RBP16.27■□□□□ 0.2
HLA-DQB3-203ENST00000425319 HACL1Q9UJ83 578 aa16.27■□□□□ 0.2
HLA-DQB3-203ENST00000425319 CEMIPQ8WUJ3 1361 aa16.26■□□□□ 0.19
HLA-DQB3-203ENST00000425319 TMEM88BA6NKF7 163 aa16.26■□□□□ 0.19
HLA-DQB3-203ENST00000425319 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
HLA-DQB3-203ENST00000425319 KCNQ3O43525 872 aa16.25■□□□□ 0.19
HLA-DQB3-203ENST00000425319 EIF6P56537 245 aaKnown RBP16.25■□□□□ 0.19
HLA-DQB3-203ENST00000425319 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
HLA-DQB3-203ENST00000425319 MCM10Q7L590 875 aa16.25■□□□□ 0.19
HLA-DQB3-203ENST00000425319 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
HLA-DQB3-203ENST00000425319 LMOD1P29536 600 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB3-203ENST00000425319 RPGRQ92834 1020 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB3-203ENST00000425319 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB3-203ENST00000425319 NRXN2Q9P2S2 1712 aa16.23■□□□□ 0.19
HLA-DQB3-203ENST00000425319 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
HLA-DQB3-203ENST00000425319 SYNE4Q8N205 404 aa16.23■□□□□ 0.19
HLA-DQB3-203ENST00000425319 ADAMTS7Q9UKP4 1686 aa16.23■□□□□ 0.19
HLA-DQB3-203ENST00000425319 SBF1O95248 1867 aa16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 KLRG2A4D1S0 409 aaPredicted RBP16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 ERVV-1B6SEH8 477 aa16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 EPHX2P34913 555 aa16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 IARSP41252 1262 aaKnown RBP16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 ZNF277Q9NRM2 450 aaPredicted RBP16.22■□□□□ 0.19
HLA-DQB3-203ENST00000425319 PPP2R1AP30153 589 aa16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 CTCFP49711 727 aaPredicted RBP16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 DEFB115Q30KQ5 88 aa16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 GPC2Q8N158 579 aa16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 RBM17Q96I25 401 aaKnown RBP16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 AFDNP55196 1824 aaKnown RBP16.21■□□□□ 0.19
HLA-DQB3-203ENST00000425319 PPP1R42Q7Z4L9 355 aa16.2■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PSMD1Q99460 953 aa16.2■□□□□ 0.18
HLA-DQB3-203ENST00000425319 BEGAINQ9BUH8 593 aa16.2■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
HLA-DQB3-203ENST00000425319 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PRAMEF22A3QJZ6 481 aa16.19■□□□□ 0.18
HLA-DQB3-203ENST00000425319 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQB3-203ENST00000425319 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
HLA-DQB3-203ENST00000425319 CNTROBQ8N137 903 aa16.19■□□□□ 0.18
HLA-DQB3-203ENST00000425319 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
HLA-DQB3-203ENST00000425319 LARGE2Q8N3Y3 721 aa16.18■□□□□ 0.18
HLA-DQB3-203ENST00000425319 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
HLA-DQB3-203ENST00000425319 ABT1Q9ULW3 272 aaKnown RBP16.18■□□□□ 0.18
HLA-DQB3-203ENST00000425319 MAPK8IP3Q9UPT6 1336 aa16.18■□□□□ 0.18
HLA-DQB3-203ENST00000425319 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 NBPF26B4DH59 902 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 FZD9O00144 591 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PASKQ96RG2 1323 aa16.17■□□□□ 0.18
HLA-DQB3-203ENST00000425319 DLEC1Q9Y238 1755 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 ITGBL1O95965 494 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 MYL6BP14649 208 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 ECE1P42892 770 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 HLFQ16534 295 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PARP10Q53GL7 1025 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 VPS33BQ9H267 617 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 MAP3K15Q6ZN16 1313 aa16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
HLA-DQB3-203ENST00000425319 UBR2Q8IWV8 1755 aa16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 VEGFBP49765 207 aa16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 CRAMP1Q96RY5 1269 aa16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 RNF123Q5XPI4 1314 aa16.15■□□□□ 0.18
HLA-DQB3-203ENST00000425319 FOXN1O15353 648 aa16.14■□□□□ 0.17
HLA-DQB3-203ENST00000425319 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms