RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
LIMK2-205ENST00000425203 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
LIMK2-205ENST00000425203 FER1L6Q2WGJ9 1857 aa20.2■□□□□ 0.82
LIMK2-205ENST00000425203 KCNQ3O43525 872 aa20.2■□□□□ 0.82
LIMK2-205ENST00000425203 NPC1L1Q9UHC9 1359 aa20.2■□□□□ 0.82
LIMK2-205ENST00000425203 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
LIMK2-205ENST00000425203 IQCA1LA6NCM1 817 aa20.19■□□□□ 0.82
LIMK2-205ENST00000425203 POTEIP0CG38 1075 aa20.19■□□□□ 0.82
LIMK2-205ENST00000425203 POTEJP0CG39 1038 aa20.19■□□□□ 0.82
LIMK2-205ENST00000425203 C7orf43Q8WVR3 580 aa20.19■□□□□ 0.82
LIMK2-205ENST00000425203 PHACTR3Q96KR7 559 aa20.19■□□□□ 0.82
LIMK2-205ENST00000425203 CNGB1Q14028 1251 aaPredicted RBP20.18■□□□□ 0.82
LIMK2-205ENST00000425203 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
LIMK2-205ENST00000425203 MKRN1Q9UHC7 482 aaKnown RBP20.18■□□□□ 0.82
LIMK2-205ENST00000425203 TPTE2Q6XPS3 522 aa20.17■□□□□ 0.82
LIMK2-205ENST00000425203 L3MBTL3Q96JM7 780 aaPredicted RBP20.17■□□□□ 0.82
LIMK2-205ENST00000425203 ZNF652Q9Y2D9 606 aa20.17■□□□□ 0.82
LIMK2-205ENST00000425203 COL3A1P02461 1466 aaPredicted RBP20.17■□□□□ 0.82
LIMK2-205ENST00000425203 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
LIMK2-205ENST00000425203 KLRG2A4D1S0 409 aaPredicted RBP20.16■□□□□ 0.82
LIMK2-205ENST00000425203 SNRPA1P09661 255 aaKnown RBP20.16■□□□□ 0.82
LIMK2-205ENST00000425203 NPR1P16066 1061 aa20.16■□□□□ 0.82
LIMK2-205ENST00000425203 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
LIMK2-205ENST00000425203 LDHDQ86WU2 507 aa20.16■□□□□ 0.82
LIMK2-205ENST00000425203 PIP4K2AP48426 406 aaPredicted RBP20.15■□□□□ 0.82
LIMK2-205ENST00000425203 CCDC93Q567U6 631 aa20.15■□□□□ 0.82
LIMK2-205ENST00000425203 TAF1DQ9H5J8 278 aaPredicted RBP20.15■□□□□ 0.82
LIMK2-205ENST00000425203 SCN7AQ01118 1682 aa20.15■□□□□ 0.82
LIMK2-205ENST00000425203 RGL2O15211 777 aa20.14■□□□□ 0.81
LIMK2-205ENST00000425203 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
LIMK2-205ENST00000425203 CFAP53Q96M91 514 aa20.14■□□□□ 0.81
LIMK2-205ENST00000425203 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
LIMK2-205ENST00000425203 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
LIMK2-205ENST00000425203 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
LIMK2-205ENST00000425203 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
LIMK2-205ENST00000425203 PASKQ96RG2 1323 aa20.13■□□□□ 0.81
LIMK2-205ENST00000425203 FKBP4Q02790 459 aaKnown RBP eCLIP20.13■□□□□ 0.81
LIMK2-205ENST00000425203 RTKN2Q8IZC4 609 aa20.13■□□□□ 0.81
LIMK2-205ENST00000425203 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
LIMK2-205ENST00000425203 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
LIMK2-205ENST00000425203 NIP7Q9Y221 180 aaKnown RBP eCLIP20.12■□□□□ 0.81
LIMK2-205ENST00000425203 ITGBL1O95965 494 aaPredicted RBP20.11■□□□□ 0.81
LIMK2-205ENST00000425203 ZNF277Q9NRM2 450 aaPredicted RBP20.11■□□□□ 0.81
LIMK2-205ENST00000425203 CNTNAP1P78357 1384 aa20.1■□□□□ 0.81
LIMK2-205ENST00000425203 TMEM88BA6NKF7 163 aa20.1■□□□□ 0.81
LIMK2-205ENST00000425203 MCM10Q7L590 875 aa20.1■□□□□ 0.81
LIMK2-205ENST00000425203 HACL1Q9UJ83 578 aa20.1■□□□□ 0.81
LIMK2-205ENST00000425203 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
LIMK2-205ENST00000425203 FOXN1O15353 648 aa20.09■□□□□ 0.81
LIMK2-205ENST00000425203 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
LIMK2-205ENST00000425203 EAPPQ56P03 285 aaPredicted RBP20.09■□□□□ 0.81
LIMK2-205ENST00000425203 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
LIMK2-205ENST00000425203 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
LIMK2-205ENST00000425203 PRDM10Q9NQV6 1147 aa20.09■□□□□ 0.81
LIMK2-205ENST00000425203 CLEC11AQ9Y240 323 aa20.09■□□□□ 0.81
LIMK2-205ENST00000425203 U2AF1L5P0DN76 240 aaPredicted RBP20.08■□□□□ 0.81
LIMK2-205ENST00000425203 GTF2E1P29083 439 aaPredicted RBP20.08■□□□□ 0.81
LIMK2-205ENST00000425203 U2AF1Q01081 240 aaKnown RBP eCLIP20.08■□□□□ 0.81
LIMK2-205ENST00000425203 PNMA8AQ86V59 439 aaPredicted RBP20.08■□□□□ 0.81
LIMK2-205ENST00000425203 SCN4AP35499 1836 aa20.08■□□□□ 0.8
LIMK2-205ENST00000425203 FAM177BA6PVY3 158 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 FZD9O00144 591 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 EPHX2P34913 555 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 VEGFBP49765 207 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
LIMK2-205ENST00000425203 OLFM4Q6UX06 510 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 SYNE4Q8N205 404 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 AIDAQ96BJ3 306 aa20.07■□□□□ 0.8
LIMK2-205ENST00000425203 ZNF541Q9H0D2 1346 aa20.06■□□□□ 0.8
LIMK2-205ENST00000425203 IARSP41252 1262 aaKnown RBP20.06■□□□□ 0.8
LIMK2-205ENST00000425203 HLFQ16534 295 aa20.06■□□□□ 0.8
LIMK2-205ENST00000425203 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
LIMK2-205ENST00000425203 CTCFP49711 727 aaPredicted RBP20.05■□□□□ 0.8
LIMK2-205ENST00000425203 DCTN1Q14203 1278 aa20.05■□□□□ 0.8
LIMK2-205ENST00000425203 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
LIMK2-205ENST00000425203 GPC2Q8N158 579 aa20.05■□□□□ 0.8
LIMK2-205ENST00000425203 BCORQ6W2J9 1755 aa20.05■□□□□ 0.8
LIMK2-205ENST00000425203 CACNA1SQ13698 1873 aa20.05■□□□□ 0.8
LIMK2-205ENST00000425203 CC2D2BQ6DHV5 1058 aa20.04■□□□□ 0.8
LIMK2-205ENST00000425203 JDP2Q8WYK2 163 aa20.04■□□□□ 0.8
LIMK2-205ENST00000425203 PSMD1Q99460 953 aa20.04■□□□□ 0.8
LIMK2-205ENST00000425203 WBP1LQ9NX94 342 aa20.04■□□□□ 0.8
LIMK2-205ENST00000425203 DEFB115Q30KQ5 88 aa20.03■□□□□ 0.8
LIMK2-205ENST00000425203 NYXQ9GZU5 481 aa20.03■□□□□ 0.8
LIMK2-205ENST00000425203 ERVV-1B6SEH8 477 aa20.02■□□□□ 0.8
LIMK2-205ENST00000425203 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
LIMK2-205ENST00000425203 MAP1SQ66K74 1059 aaPredicted RBP20.02■□□□□ 0.8
LIMK2-205ENST00000425203 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
LIMK2-205ENST00000425203 RASSF10A6NK89 507 aa20.01■□□□□ 0.79
LIMK2-205ENST00000425203 PPP2R1AP30153 589 aa20.01■□□□□ 0.79
LIMK2-205ENST00000425203 GRIPAP1Q4V328 841 aa20.01■□□□□ 0.79
LIMK2-205ENST00000425203 MIS18AQ9NYP9 233 aa20.01■□□□□ 0.79
LIMK2-205ENST00000425203 EIF6P56537 245 aaKnown RBP20■□□□□ 0.79
LIMK2-205ENST00000425203 HOXA10P31260 410 aaPredicted RBP19.99■□□□□ 0.79
LIMK2-205ENST00000425203 NUTM1Q86Y26 1132 aa19.99■□□□□ 0.79
LIMK2-205ENST00000425203 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
LIMK2-205ENST00000425203 PNISRQ8TF01 805 aaKnown RBP19.99■□□□□ 0.79
LIMK2-205ENST00000425203 LBX1P52954 281 aa19.98■□□□□ 0.79
LIMK2-205ENST00000425203 MAP2K1Q02750 393 aaPredicted RBP19.98■□□□□ 0.79
LIMK2-205ENST00000425203 RPGRQ92834 1020 aaKnown RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms