RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 FCHSD2O94868 740 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 PAFAH1B1P43034 410 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 PRIMPOLQ96LW4 560 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 HOMER2Q9NSB8 354 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 VPS18Q9P253 973 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 KRT32Q14532 448 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 NFE2L2Q16236 605 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 TMOD3Q9NYL9 352 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 EXOC6BQ9Y2D4 811 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
TNC-203ENST00000423613 CCDC96Q2M329 555 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 RNF168Q8IYW5 571 aaPredicted RBP12.8□□□□□ -0.36
TNC-203ENST00000423613 NSD3Q9BZ95 1437 aa12.8□□□□□ -0.36
TNC-203ENST00000423613 A0A1B0GUA9 196 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 POTEJP0CG39 1038 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 MCM6Q14566 821 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 TTC16Q8NEE8 873 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 CCDC114Q96M63 670 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 ZNF830Q96NB3 372 aaPredicted RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 NSRP1Q9H0G5 558 aaKnown RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 SEC63Q9UGP8 760 aaKnown RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 ADCY5O95622 1261 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 RNF216Q9NWF9 866 aaPredicted RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 FERP16591 822 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 CAVIN4Q5BKX8 364 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 CCDC183Q5T5S1 534 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 SMAP1Q8IYB5 467 aaPredicted RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 NUP88Q99567 741 aaPredicted RBP12.79□□□□□ -0.36
TNC-203ENST00000423613 ZNF622Q969S3 477 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNC-203ENST00000423613 MIS18AQ9NYP9 233 aa12.79□□□□□ -0.36
TNC-203ENST00000423613 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 PTCD1O75127 700 aaKnown RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNC-203ENST00000423613 MKNK2Q9HBH9 465 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 PLEKHH2Q8IVE3 1493 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 WDR97A6NE52 1622 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 SMARCA5O60264 1052 aaPredicted RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 ERCC3P19447 782 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 LRCH2Q5VUJ6 765 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 TRMT1LQ7Z2T5 733 aaKnown RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 TMC6Q7Z403 805 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 HOOK3Q86VS8 718 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 TPD52P55327 224 aaPredicted RBP12.78□□□□□ -0.36
TNC-203ENST00000423613 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 MRVI1Q9Y6F6 885 aa12.78□□□□□ -0.36
TNC-203ENST00000423613 DIXDC1Q155Q3 683 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 METTL24Q5JXM2 366 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 CCDC83Q8IWF9 413 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 SLC52A1Q9NWF4 448 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.36
TNC-203ENST00000423613 V9GYY5 206 aaPredicted RBP12.77□□□□□ -0.36
TNC-203ENST00000423613 CFAP58Q5T655 872 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 FERMT3Q86UX7 667 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 GBP7Q8N8V2 638 aaPredicted RBP12.77□□□□□ -0.36
TNC-203ENST00000423613 DAPK1P53355 1430 aa12.77□□□□□ -0.36
TNC-203ENST00000423613 FSD2A1L4K1 749 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 KLHL10Q6JEL2 608 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
TNC-203ENST00000423613 PPP1R14CQ8TAE6 165 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
TNC-203ENST00000423613 CUL5Q93034 780 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 FEZ1Q99689 392 aa12.77□□□□□ -0.37
TNC-203ENST00000423613 EFCAB5A4FU69 1503 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 GNAT3A8MTJ3 354 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 MX1P20591 662 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 COMMD10Q9Y6G5 202 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 MPRIPQ6WCQ1 1025 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 EBAG9O00559 213 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 PRPF40BQ6NWY9 871 aaKnown RBP12.76□□□□□ -0.37
TNC-203ENST00000423613 MCM10Q7L590 875 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 WASF1Q92558 559 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 GOLGA6L9A6NEM1 432 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 BUB1BO60566 1050 aaPredicted RBP12.76□□□□□ -0.37
TNC-203ENST00000423613 ZNF287Q9HBT7 754 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 DUSP27Q5VZP5 1158 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 SELENOSQ9BQE4 189 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
TNC-203ENST00000423613 CETN2P41208 172 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 CACNA2D4Q7Z3S7 1137 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 SKAP1Q86WV1 359 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 JADE2Q9NQC1 790 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 C6orf229H3BNL8 230 aa12.75□□□□□ -0.37
TNC-203ENST00000423613 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
TNC-203ENST00000423613 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms