RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 TNNT1P13805 278 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 AEBP1Q8IUX7 1158 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 MRC2Q9UBG0 1479 aa12.79□□□□□ -0.36
SCN5A-205ENST00000423572 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 ZRANB1Q9UGI0 708 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 CEP83Q9Y592 693 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 SSFA2P28290 1259 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 CDCA7Q9BWT1 371 aaPredicted RBP12.78□□□□□ -0.36
SCN5A-205ENST00000423572 NEK4P51957 841 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 CFAP70Q5T0N1 1121 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 CCDC113Q9H0I3 377 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 GAS8O95995 478 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 SPA17Q15506 151 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 TNPO1Q92973 898 aaKnown RBP12.78□□□□□ -0.36
SCN5A-205ENST00000423572 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
SCN5A-205ENST00000423572 ABT1Q9ULW3 272 aaKnown RBP12.78□□□□□ -0.36
SCN5A-205ENST00000423572 GOPCQ9HD26 462 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 STX8Q9UNK0 236 aa12.78□□□□□ -0.36
SCN5A-205ENST00000423572 GSE1Q14687 1217 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 PROCA1Q8NCQ7 364 aaPredicted RBP12.77□□□□□ -0.36
SCN5A-205ENST00000423572 CCDC14Q49A88 953 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 CFAP45Q9UL16 551 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 AMOTL2Q9Y2J4 779 aa12.77□□□□□ -0.36
SCN5A-205ENST00000423572 AMPD3Q01432 767 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 PDE3AQ14432 1141 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 CAVIN1Q6NZI2 390 aaKnown RBP12.77□□□□□ -0.37
SCN5A-205ENST00000423572 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 H0YIN7 160 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 FCHSD2O94868 740 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 CNGA1P29973 690 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 IKBKGQ9Y6K9 419 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 ERBINQ96RT1 1412 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 SLC8A3P57103 927 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.37
SCN5A-205ENST00000423572 TPTE2Q6XPS3 522 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC61Q9Y6R9 512 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 NPHP3Q7Z494 1330 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 RIMBP2O15034 1052 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.37
SCN5A-205ENST00000423572 FGD5Q6ZNL6 1462 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 NOP56O00567 594 aaKnown RBP12.76□□□□□ -0.37
SCN5A-205ENST00000423572 RBM17Q96I25 401 aaKnown RBP12.76□□□□□ -0.37
SCN5A-205ENST00000423572 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 CEBPAP49715 358 aaPredicted RBP12.76□□□□□ -0.37
SCN5A-205ENST00000423572 CD109Q6YHK3 1445 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 H7C1D1 291 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 ZNF213O14771 459 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 NAIPQ13075 1403 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 FIBPO43427 364 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 NR1I2O75469 434 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 LRRC59Q96AG4 307 aaKnown RBP12.76□□□□□ -0.37
SCN5A-205ENST00000423572 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 GOLGA1Q92805 767 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
SCN5A-205ENST00000423572 CWC25Q9NXE8 425 aaPredicted RBP12.76□□□□□ -0.37
SCN5A-205ENST00000423572 HECW1Q76N89 1606 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC87Q9NVE4 849 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 WDR7Q9Y4E6 1490 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 BACH1O14867 736 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 APBA3O96018 575 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 SH2D4AQ9H788 454 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 HAUS2Q9NVX0 235 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 SPDYE3A6NKU9 549 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 SSRP1Q08945 709 aaKnown RBP12.75□□□□□ -0.37
SCN5A-205ENST00000423572 GSDMBQ8TAX9 411 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 KIAA0754O94854 1291 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 MAP2K1Q02750 393 aaPredicted RBP12.75□□□□□ -0.37
SCN5A-205ENST00000423572 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 LDHAL6AQ6ZMR3 332 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 ANKRD50Q9ULJ7 1429 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
SCN5A-205ENST00000423572 IFIT3O14879 490 aaKnown RBP12.74□□□□□ -0.37
SCN5A-205ENST00000423572 SKIV2LQ15477 1246 aaKnown RBP12.74□□□□□ -0.37
SCN5A-205ENST00000423572 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 CACYBPQ9HB71 228 aaKnown RBP12.74□□□□□ -0.37
SCN5A-205ENST00000423572 ERLIN1O75477 346 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
SCN5A-205ENST00000423572 CFAP58Q5T655 872 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 C6orf50Q9HD87 102 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 CHRNA2Q15822 529 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
SCN5A-205ENST00000423572 TNMDQ9H2S6 317 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 SP4Q02446 784 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 GABPAQ06546 454 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 TBC1D5Q92609 795 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 HACE1Q8IYU2 909 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 LARGE2Q8N3Y3 721 aa12.74□□□□□ -0.37
SCN5A-205ENST00000423572 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 NIP7Q9Y221 180 aaKnown RBP eCLIP12.73□□□□□ -0.37
SCN5A-205ENST00000423572 PDE6BP35913 854 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms