RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CACTINQ8WUQ7 758 aaKnown RBP19.77■□□□□ 0.76
PKP4-204ENST00000421462 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
PKP4-204ENST00000421462 TRERF1Q96PN7 1200 aa19.77■□□□□ 0.76
PKP4-204ENST00000421462 STAP2Q9UGK3 403 aa19.77■□□□□ 0.76
PKP4-204ENST00000421462 FEZ1Q99689 392 aa19.77■□□□□ 0.75
PKP4-204ENST00000421462 FILIP1Q7Z7B0 1213 aa19.76■□□□□ 0.75
PKP4-204ENST00000421462 USP44Q9H0E7 712 aa19.76■□□□□ 0.75
PKP4-204ENST00000421462 CYP46A1Q9Y6A2 500 aa19.76■□□□□ 0.75
PKP4-204ENST00000421462 SMTNL1A8MU46 457 aa19.76■□□□□ 0.75
PKP4-204ENST00000421462 PHAXQ9H814 394 aaKnown RBP19.76■□□□□ 0.75
PKP4-204ENST00000421462 USP27XA6NNY8 438 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 ZNF165P49910 485 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 CCDC144BQ3MJ40 725 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 CCDC144CPQ8IYA2 1237 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 SPATA32Q96LK8 384 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 ST7Q9NRC1 585 aa19.75■□□□□ 0.75
PKP4-204ENST00000421462 CDK12Q9NYV4 1490 aaPredicted RBP19.74■□□□□ 0.75
PKP4-204ENST00000421462 PI4K2BQ8TCG2 481 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 SSH2Q76I76 1423 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 CEP135Q66GS9 1140 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 DDX11Q96FC9 970 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 ZNF75DP51815 510 aa19.74■□□□□ 0.75
PKP4-204ENST00000421462 SOS1Q07889 1333 aaPredicted RBP19.73■□□□□ 0.75
PKP4-204ENST00000421462 ZNF215Q9UL58 517 aaPredicted RBP19.73■□□□□ 0.75
PKP4-204ENST00000421462 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
PKP4-204ENST00000421462 PPFIA3O75145 1194 aa19.73■□□□□ 0.75
PKP4-204ENST00000421462 CCDC30Q5VVM6 783 aa19.73■□□□□ 0.75
PKP4-204ENST00000421462 TPCN1Q9ULQ1 816 aa19.73■□□□□ 0.75
PKP4-204ENST00000421462 RAB11FIP3O75154 756 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 NR1I2O75469 434 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 ANXA1P04083 346 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 CDK11BP21127 795 aaKnown RBP19.72■□□□□ 0.75
PKP4-204ENST00000421462 ST3GAL1Q11201 340 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 PIK3C2BO00750 1634 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 EDC4Q6P2E9 1401 aaKnown RBP19.72■□□□□ 0.75
PKP4-204ENST00000421462 FRMPD1Q5SYB0 1578 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 NBPF7P0C2Y1 421 aaPredicted RBP19.72■□□□□ 0.75
PKP4-204ENST00000421462 GTF2E1P29083 439 aaPredicted RBP19.72■□□□□ 0.75
PKP4-204ENST00000421462 MLECQ14165 292 aa19.72■□□□□ 0.75
PKP4-204ENST00000421462 LTV1Q96GA3 475 aaPredicted RBP19.72■□□□□ 0.75
PKP4-204ENST00000421462 MAP3K19Q56UN5 1328 aa19.71■□□□□ 0.75
PKP4-204ENST00000421462 CPS1P31327 1500 aa19.71■□□□□ 0.75
PKP4-204ENST00000421462 ERCC4Q92889 916 aaPredicted RBP19.71■□□□□ 0.75
PKP4-204ENST00000421462 DDX41Q9UJV9 622 aaKnown RBP19.71■□□□□ 0.75
PKP4-204ENST00000421462 GOLGA6L19H0YKK7 550 aa19.7■□□□□ 0.74
PKP4-204ENST00000421462 ELF2Q15723 593 aa19.7■□□□□ 0.74
PKP4-204ENST00000421462 USP16Q9Y5T5 823 aa19.7■□□□□ 0.74
PKP4-204ENST00000421462 LARP1Q6PKG0 1096 aaKnown RBP19.7■□□□□ 0.74
PKP4-204ENST00000421462 KIF18AQ8NI77 898 aa19.7■□□□□ 0.74
PKP4-204ENST00000421462 ZKSCAN1P17029 563 aaPredicted RBP19.7■□□□□ 0.74
PKP4-204ENST00000421462 SLFN14P0C7P3 912 aa19.69■□□□□ 0.74
PKP4-204ENST00000421462 KMT5BQ4FZB7 885 aa19.69■□□□□ 0.74
PKP4-204ENST00000421462 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
PKP4-204ENST00000421462 PTPN14Q15678 1187 aa19.68■□□□□ 0.74
PKP4-204ENST00000421462 KIF1BPQ96EK5 621 aa19.68■□□□□ 0.74
PKP4-204ENST00000421462 FAM227BQ96M60 508 aa19.68■□□□□ 0.74
PKP4-204ENST00000421462 PAXBP1Q9Y5B6 917 aa19.68■□□□□ 0.74
PKP4-204ENST00000421462 HDGFL1Q5TGJ6 251 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 VPS53Q5VIR6 699 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 PA2G4Q9UQ80 394 aaKnown RBP19.67■□□□□ 0.74
PKP4-204ENST00000421462 CRB1P82279 1406 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 SKILP12757 684 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 RBM8AQ9Y5S9 174 aaKnown RBP19.67■□□□□ 0.74
PKP4-204ENST00000421462 ATP7BP35670 1465 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 AATKQ6ZMQ8 1374 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 KRT222Q8N1A0 295 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 TAF6LQ9Y6J9 622 aa19.67■□□□□ 0.74
PKP4-204ENST00000421462 BECN2A8MW95 431 aa19.66■□□□□ 0.74
PKP4-204ENST00000421462 ZSCAN31Q96LW9 406 aaPredicted RBP19.66■□□□□ 0.74
PKP4-204ENST00000421462 SH2B1Q9NRF2 756 aaPredicted RBP19.66■□□□□ 0.74
PKP4-204ENST00000421462 TMEM51Q9NW97 253 aa19.66■□□□□ 0.74
PKP4-204ENST00000421462 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
PKP4-204ENST00000421462 NUTM2GQ5VZR2 741 aa19.66■□□□□ 0.74
PKP4-204ENST00000421462 LEO1Q8WVC0 666 aaPredicted RBP19.66■□□□□ 0.74
PKP4-204ENST00000421462 RUFY2Q8WXA3 655 aa19.66■□□□□ 0.74
PKP4-204ENST00000421462 AMPHP49418 695 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 GORABQ5T7V8 394 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 FBXO38Q6PIJ6 1188 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 ALKQ9UM73 1620 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 TERF2Q15554 542 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 PLA2G4DQ86XP0 818 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 JAK2O60674 1132 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 GTF3C6Q969F1 213 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 TAOK2Q9UL54 1235 aa19.65■□□□□ 0.74
PKP4-204ENST00000421462 IFIT2P09913 472 aaKnown RBP19.64■□□□□ 0.73
PKP4-204ENST00000421462 GABPB1Q06547 395 aaPredicted RBP19.64■□□□□ 0.73
PKP4-204ENST00000421462 CREB3L3Q68CJ9 461 aa19.64■□□□□ 0.73
PKP4-204ENST00000421462 ZSWIM6Q9HCJ5 1215 aa19.64■□□□□ 0.73
PKP4-204ENST00000421462 C11orf57Q6ZUT1 292 aaPredicted RBP19.64■□□□□ 0.73
PKP4-204ENST00000421462 LRRC8AQ8IWT6 810 aa19.64■□□□□ 0.73
PKP4-204ENST00000421462 PGBD1Q96JS3 809 aa19.64■□□□□ 0.73
PKP4-204ENST00000421462 CLASRPQ8N2M8 674 aaKnown RBP19.63■□□□□ 0.73
PKP4-204ENST00000421462 NAP1L2Q9ULW6 460 aaPredicted RBP19.63■□□□□ 0.73
PKP4-204ENST00000421462 H3BQV1 296 aa19.63■□□□□ 0.73
PKP4-204ENST00000421462 IFFO2Q5TF58 517 aa19.63■□□□□ 0.73
PKP4-204ENST00000421462 FTOQ9C0B1 505 aaKnown RBP eCLIP19.63■□□□□ 0.73
PKP4-204ENST00000421462 SCAND2PQ9GZW5 306 aaPredicted RBP19.63■□□□□ 0.73
PKP4-204ENST00000421462 CLSTN2Q9H4D0 955 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms