RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
ITSN1-215ENST00000420666 ERFEQ4G0M1 354 aa19.59■□□□□ 0.73
ITSN1-215ENST00000420666 JMYQ8N9B5 988 aa19.59■□□□□ 0.73
ITSN1-215ENST00000420666 ZNF652Q9Y2D9 606 aa19.59■□□□□ 0.73
ITSN1-215ENST00000420666 SIPA1L3O60292 1781 aaPredicted RBP19.59■□□□□ 0.73
ITSN1-215ENST00000420666 POTECB2RU33 542 aa19.58■□□□□ 0.72
ITSN1-215ENST00000420666 TAF7Q15545 349 aaPredicted RBP19.58■□□□□ 0.72
ITSN1-215ENST00000420666 SOGA3Q5TF21 947 aa19.58■□□□□ 0.72
ITSN1-215ENST00000420666 NBPF5PQ86XG9 351 aaPredicted RBP19.58■□□□□ 0.72
ITSN1-215ENST00000420666 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
ITSN1-215ENST00000420666 DLEC1Q9Y238 1755 aa19.57■□□□□ 0.72
ITSN1-215ENST00000420666 SCN7AQ01118 1682 aa19.57■□□□□ 0.72
ITSN1-215ENST00000420666 NBPF26B4DH59 902 aa19.57■□□□□ 0.72
ITSN1-215ENST00000420666 PRPF40BQ6NWY9 871 aaKnown RBP19.57■□□□□ 0.72
ITSN1-215ENST00000420666 NBPF10Q6P3W6 841 aaKnown RBP19.57■□□□□ 0.72
ITSN1-215ENST00000420666 NBPF15Q8N660 670 aa19.57■□□□□ 0.72
ITSN1-215ENST00000420666 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
ITSN1-215ENST00000420666 TPTE2Q6XPS3 522 aa19.56■□□□□ 0.72
ITSN1-215ENST00000420666 KLRG2A4D1S0 409 aaPredicted RBP19.55■□□□□ 0.72
ITSN1-215ENST00000420666 NEFMP07197 916 aa19.54■□□□□ 0.72
ITSN1-215ENST00000420666 C7orf43Q8WVR3 580 aa19.54■□□□□ 0.72
ITSN1-215ENST00000420666 NIP7Q9Y221 180 aaKnown RBP eCLIP19.54■□□□□ 0.72
ITSN1-215ENST00000420666 NPR1P16066 1061 aa19.53■□□□□ 0.72
ITSN1-215ENST00000420666 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
ITSN1-215ENST00000420666 MIS18AQ9NYP9 233 aa19.53■□□□□ 0.72
ITSN1-215ENST00000420666 ANKRD31Q8N7Z5 1873 aa19.53■□□□□ 0.72
ITSN1-215ENST00000420666 WDR90Q96KV7 1748 aa19.53■□□□□ 0.72
ITSN1-215ENST00000420666 CCDC93Q567U6 631 aa19.51■□□□□ 0.71
ITSN1-215ENST00000420666 DDNO94850 711 aaPredicted RBP19.5■□□□□ 0.71
ITSN1-215ENST00000420666 HLFQ16534 295 aa19.5■□□□□ 0.71
ITSN1-215ENST00000420666 PLEKHF1Q96S99 279 aa19.49■□□□□ 0.71
ITSN1-215ENST00000420666 COL11A2P13942 1736 aaPredicted RBP19.48■□□□□ 0.71
ITSN1-215ENST00000420666 FAM177BA6PVY3 158 aa19.48■□□□□ 0.71
ITSN1-215ENST00000420666 ERVV-1B6SEH8 477 aa19.48■□□□□ 0.71
ITSN1-215ENST00000420666 FKBP4Q02790 459 aaKnown RBP eCLIP19.48■□□□□ 0.71
ITSN1-215ENST00000420666 CHADLQ6NUI6 762 aa19.48■□□□□ 0.71
ITSN1-215ENST00000420666 GTF2E1P29083 439 aaPredicted RBP19.47■□□□□ 0.71
ITSN1-215ENST00000420666 ALDH1B1P30837 517 aa19.47■□□□□ 0.71
ITSN1-215ENST00000420666 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
ITSN1-215ENST00000420666 NFE2L2Q16236 605 aa19.47■□□□□ 0.71
ITSN1-215ENST00000420666 RTKN2Q8IZC4 609 aa19.47■□□□□ 0.71
ITSN1-215ENST00000420666 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
ITSN1-215ENST00000420666 BCORQ6W2J9 1755 aa19.47■□□□□ 0.71
ITSN1-215ENST00000420666 SLX4Q8IY92 1834 aa19.46■□□□□ 0.71
ITSN1-215ENST00000420666 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
ITSN1-215ENST00000420666 NGEFQ8N5V2 710 aa19.46■□□□□ 0.71
ITSN1-215ENST00000420666 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
ITSN1-215ENST00000420666 NYXQ9GZU5 481 aa19.46■□□□□ 0.71
ITSN1-215ENST00000420666 FER1L6Q2WGJ9 1857 aa19.45■□□□□ 0.7
ITSN1-215ENST00000420666 TIAM2Q8IVF5 1701 aa19.45■□□□□ 0.7
ITSN1-215ENST00000420666 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
ITSN1-215ENST00000420666 MAP3K15Q6ZN16 1313 aa19.45■□□□□ 0.7
ITSN1-215ENST00000420666 COL13A1Q5TAT6 717 aaPredicted RBP19.44■□□□□ 0.7
ITSN1-215ENST00000420666 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
ITSN1-215ENST00000420666 ZNF277Q9NRM2 450 aaPredicted RBP19.44■□□□□ 0.7
ITSN1-215ENST00000420666 POTEIP0CG38 1075 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 POTEJP0CG39 1038 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 CRY2Q49AN0 593 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 OLFM4Q6UX06 510 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 TTLL7Q6ZT98 887 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 TAF1DQ9H5J8 278 aaPredicted RBP19.43■□□□□ 0.7
ITSN1-215ENST00000420666 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
ITSN1-215ENST00000420666 LDHDQ86WU2 507 aa19.42■□□□□ 0.7
ITSN1-215ENST00000420666 NUTM1Q86Y26 1132 aa19.42■□□□□ 0.7
ITSN1-215ENST00000420666 SYNE4Q8N205 404 aa19.42■□□□□ 0.7
ITSN1-215ENST00000420666 CREBZFQ9NS37 354 aa19.42■□□□□ 0.7
ITSN1-215ENST00000420666 MAPK8IP3Q9UPT6 1336 aa19.42■□□□□ 0.7
ITSN1-215ENST00000420666 MYL6BP14649 208 aa19.41■□□□□ 0.7
ITSN1-215ENST00000420666 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
ITSN1-215ENST00000420666 HSPA1AP0DMV8 641 aaKnown RBP19.4■□□□□ 0.7
ITSN1-215ENST00000420666 HSPA1BP0DMV9 641 aaKnown RBP19.4■□□□□ 0.7
ITSN1-215ENST00000420666 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
ITSN1-215ENST00000420666 IARSP41252 1262 aaKnown RBP19.4■□□□□ 0.7
ITSN1-215ENST00000420666 PSMD1Q99460 953 aa19.4■□□□□ 0.7
ITSN1-215ENST00000420666 DICER1Q9UPY3 1922 aaKnown RBP19.4■□□□□ 0.7
ITSN1-215ENST00000420666 ERBB4Q15303 1308 aa19.4■□□□□ 0.7
ITSN1-215ENST00000420666 ZNF541Q9H0D2 1346 aa19.4■□□□□ 0.7
ITSN1-215ENST00000420666 ABCC12Q96J65 1359 aa19.4■□□□□ 0.7
ITSN1-215ENST00000420666 FZD9O00144 591 aa19.39■□□□□ 0.69
ITSN1-215ENST00000420666 SUSD4Q5VX71 490 aa19.39■□□□□ 0.69
ITSN1-215ENST00000420666 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
ITSN1-215ENST00000420666 ZBTB3Q9H5J0 574 aa19.39■□□□□ 0.69
ITSN1-215ENST00000420666 GPTP24298 496 aa19.38■□□□□ 0.69
ITSN1-215ENST00000420666 GIGYF2Q6Y7W6 1299 aaKnown RBP19.38■□□□□ 0.69
ITSN1-215ENST00000420666 UBN2Q6ZU65 1347 aa19.38■□□□□ 0.69
ITSN1-215ENST00000420666 IBTKQ9P2D0 1353 aaPredicted RBP19.38■□□□□ 0.69
ITSN1-215ENST00000420666 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
ITSN1-215ENST00000420666 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
ITSN1-215ENST00000420666 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
ITSN1-215ENST00000420666 GRIPAP1Q4V328 841 aa19.37■□□□□ 0.69
ITSN1-215ENST00000420666 RPGRQ92834 1020 aaKnown RBP19.37■□□□□ 0.69
ITSN1-215ENST00000420666 BABAM1Q9NWV8 329 aa19.37■□□□□ 0.69
ITSN1-215ENST00000420666 TSPYL4Q9UJ04 414 aa19.37■□□□□ 0.69
ITSN1-215ENST00000420666 RIPK4P57078 832 aa19.36■□□□□ 0.69
ITSN1-215ENST00000420666 JDP2Q8WYK2 163 aa19.36■□□□□ 0.69
ITSN1-215ENST00000420666 CRAMP1Q96RY5 1269 aa19.36■□□□□ 0.69
ITSN1-215ENST00000420666 MKRN1Q9UHC7 482 aaKnown RBP19.36■□□□□ 0.69
ITSN1-215ENST00000420666 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
ITSN1-215ENST00000420666 SNED1Q8TER0 1413 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms