RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PXDNLA1KZ92 1463 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 CACNA1FO60840 1977 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 DTNBO60941 627 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 GSE1Q14687 1217 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 SNX21Q969T3 373 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 ESYT1Q9BSJ8 1104 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 TLR7Q9NYK1 1049 aaKnown RBP10.78□□□□□ -0.68
SNCA-206ENST00000420646 KAT6BQ8WYB5 2073 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 K7ELQ4 463 aaPredicted RBP10.78□□□□□ -0.68
SNCA-206ENST00000420646 TOM1O60784 492 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 IL2RBP14784 551 aa10.78□□□□□ -0.68
SNCA-206ENST00000420646 ALDH1L1O75891 902 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 SASH1O94885 1247 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 GCKRQ14397 625 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 ZBTB3Q9H5J0 574 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 CHMP5Q9NZZ3 219 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 STAP2Q9UGK3 403 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.69
SNCA-206ENST00000420646 COL5A2P05997 1499 aaPredicted RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 NEXNQ0ZGT2 675 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 PKP1Q13835 747 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 CWC27Q6UX04 472 aaKnown RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 AACSQ86V21 672 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 METTL22Q9BUU2 404 aaPredicted RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 CHMP4AQ9BY43 222 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 UPF3BQ9BZI7 483 aaKnown RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 C5P01031 1676 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 A0A0G2JS52 829 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 RAB11FIP3O75154 756 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 REC8O95072 547 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
SNCA-206ENST00000420646 ASAP1Q9ULH1 1129 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 OVOS2A0A0G2JMS6 1433 aa10.76□□□□□ -0.69
SNCA-206ENST00000420646 ZGPATQ8N5A5 531 aaKnown RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 CHAMP1Q96JM3 812 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 A0A087WZG4 1122 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 ADAMTS2O95450 1211 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 DDIT3P35638 169 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 NEK4P51957 841 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 CLASRPQ8N2M8 674 aaKnown RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 SYTL4Q96C24 671 aaPredicted RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 CHMP3Q9Y3E7 222 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 CRYBG1Q9Y4K1 1723 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 CHGBP05060 677 aa10.75□□□□□ -0.69
SNCA-206ENST00000420646 TNPO1Q92973 898 aaKnown RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 EDC3Q96F86 508 aaKnown RBP10.75□□□□□ -0.69
SNCA-206ENST00000420646 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
SNCA-206ENST00000420646 MCM4P33991 863 aa10.74□□□□□ -0.69
SNCA-206ENST00000420646 MTX1Q13505 466 aa10.74□□□□□ -0.69
SNCA-206ENST00000420646 CCDC85AQ96PX6 553 aaPredicted RBP10.74□□□□□ -0.69
SNCA-206ENST00000420646 IFIT2P09913 472 aaKnown RBP10.74□□□□□ -0.69
SNCA-206ENST00000420646 SSFA2P28290 1259 aa10.74□□□□□ -0.69
SNCA-206ENST00000420646 RABEP1Q15276 862 aa10.74□□□□□ -0.69
SNCA-206ENST00000420646 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
SNCA-206ENST00000420646 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
SNCA-206ENST00000420646 G3BP1Q13283 466 aaKnown RBP eCLIP10.73□□□□□ -0.69
SNCA-206ENST00000420646 BOLA2Q9H3K6 86 aa10.73□□□□□ -0.69
SNCA-206ENST00000420646 EP400Q96L91 3159 aa10.73□□□□□ -0.69
SNCA-206ENST00000420646 CPA1P15085 419 aa10.73□□□□□ -0.69
SNCA-206ENST00000420646 PIGBQ92521 554 aa10.73□□□□□ -0.69
SNCA-206ENST00000420646 ADAMTS7Q9UKP4 1686 aa10.72□□□□□ -0.69
SNCA-206ENST00000420646 LMBR1LQ6UX01 489 aa10.72□□□□□ -0.69
SNCA-206ENST00000420646 UTYO14607 1347 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 DNAJC10Q8IXB1 793 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 SYNE4Q8N205 404 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 TMOD3Q9NYL9 352 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 AK9Q5TCS8 1911 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
SNCA-206ENST00000420646 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
SNCA-206ENST00000420646 TFCP2Q12800 502 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
SNCA-206ENST00000420646 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
SNCA-206ENST00000420646 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 ZNF594Q96JF6 807 aaPredicted RBP10.71□□□□□ -0.69
SNCA-206ENST00000420646 FAM227BQ96M60 508 aa10.71□□□□□ -0.69
SNCA-206ENST00000420646 ERVV-2B6SEH9 535 aa10.71□□□□□ -0.7
SNCA-206ENST00000420646 PTPN12Q05209 780 aaKnown RBP10.71□□□□□ -0.7
SNCA-206ENST00000420646 PLBD2Q8NHP8 589 aa10.71□□□□□ -0.7
SNCA-206ENST00000420646 PTH1RQ03431 593 aa10.7□□□□□ -0.7
SNCA-206ENST00000420646 CNTROBQ8N137 903 aa10.7□□□□□ -0.7
SNCA-206ENST00000420646 BRPF3Q9ULD4 1205 aa10.7□□□□□ -0.7
SNCA-206ENST00000420646 ST18O60284 1047 aa10.7□□□□□ -0.7
SNCA-206ENST00000420646 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
SNCA-206ENST00000420646 FOXD4L6Q3SYB3 417 aaPredicted RBP10.7□□□□□ -0.7
SNCA-206ENST00000420646 FOXD4L3Q6VB84 417 aaPredicted RBP10.7□□□□□ -0.7
SNCA-206ENST00000420646 SGSM2O43147 1006 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 RAB3GAP1Q15042 981 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 NKX1-1Q15270 411 aaPredicted RBP10.69□□□□□ -0.7
SNCA-206ENST00000420646 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 N4BP2Q86UW6 1770 aaPredicted RBP10.69□□□□□ -0.7
SNCA-206ENST00000420646 TRAK2O60296 914 aa10.69□□□□□ -0.7
SNCA-206ENST00000420646 RFX5P48382 616 aaPredicted RBP10.69□□□□□ -0.7
SNCA-206ENST00000420646 TMX3Q96JJ7 454 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms