RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 PHAXQ9H814 394 aaKnown RBP12.94□□□□□ -0.34
PHF3-203ENST00000420043 TMOD3Q9NYL9 352 aa12.94□□□□□ -0.34
PHF3-203ENST00000420043 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
PHF3-203ENST00000420043 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
PHF3-203ENST00000420043 GNAI3P08754 354 aa12.93□□□□□ -0.34
PHF3-203ENST00000420043 DDX21Q9NR30 783 aaKnown RBP eCLIP12.93□□□□□ -0.34
PHF3-203ENST00000420043 TFCP2L1Q9NZI6 479 aa12.93□□□□□ -0.34
PHF3-203ENST00000420043 PDZRN3Q9UPQ7 1066 aa12.93□□□□□ -0.34
PHF3-203ENST00000420043 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 PXDNLA1KZ92 1463 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 ANXA1P04083 346 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 SKAP1Q86WV1 359 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 KLHL34Q8N239 644 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 MEIS3Q99687 375 aa12.92□□□□□ -0.34
PHF3-203ENST00000420043 CCNL1Q9UK58 526 aaPredicted RBP12.92□□□□□ -0.34
PHF3-203ENST00000420043 GNAI2P04899 355 aa12.91□□□□□ -0.34
PHF3-203ENST00000420043 RPAP2Q8IXW5 612 aaPredicted RBP12.91□□□□□ -0.34
PHF3-203ENST00000420043 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
PHF3-203ENST00000420043 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
PHF3-203ENST00000420043 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
PHF3-203ENST00000420043 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
PHF3-203ENST00000420043 DOT1LQ8TEK3 1739 aa12.91□□□□□ -0.34
PHF3-203ENST00000420043 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
PHF3-203ENST00000420043 GOLGB1Q14789 3259 aaKnown RBP12.9□□□□□ -0.34
PHF3-203ENST00000420043 PI4KAP2A4QPH2 592 aa12.9□□□□□ -0.34
PHF3-203ENST00000420043 HMMRO75330 724 aa12.9□□□□□ -0.34
PHF3-203ENST00000420043 SMC5Q8IY18 1101 aa12.9□□□□□ -0.34
PHF3-203ENST00000420043 PI4KAP1Q8N8J0 262 aa12.9□□□□□ -0.34
PHF3-203ENST00000420043 UBTFL1P0CB47 393 aaPredicted RBP12.89□□□□□ -0.35
PHF3-203ENST00000420043 MYL6BP14649 208 aa12.89□□□□□ -0.35
PHF3-203ENST00000420043 AIMP1Q12904 312 aaKnown RBP12.89□□□□□ -0.35
PHF3-203ENST00000420043 PROSER3Q2NL68 480 aa12.89□□□□□ -0.35
PHF3-203ENST00000420043 KSR2Q6VAB6 950 aa12.89□□□□□ -0.35
PHF3-203ENST00000420043 ANKRD44Q8N8A2 993 aa12.89□□□□□ -0.35
PHF3-203ENST00000420043 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
PHF3-203ENST00000420043 PDE4AP27815 886 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 CEP85Q6P2H3 762 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
PHF3-203ENST00000420043 SLC16A10Q8TF71 515 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
PHF3-203ENST00000420043 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 POLD1P28340 1107 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 NEXNQ0ZGT2 675 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 PDIA6Q15084 440 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 BEND3Q5T5X7 828 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 ANKRD45Q5TZF3 282 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 MSL1Q68DK7 614 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 SMIM5Q71RC9 77 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 XAGE3Q8WTP9 111 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 PIGBQ92521 554 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 TEX13AQ9BXU3 409 aaPredicted RBP12.87□□□□□ -0.35
PHF3-203ENST00000420043 ATP10DQ9P241 1426 aa12.87□□□□□ -0.35
PHF3-203ENST00000420043 ADCY9O60503 1353 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 NUCB1Q02818 461 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 GPR162Q16538 588 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 FAM161AQ3B820 660 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 SIRT2Q8IXJ6 389 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
PHF3-203ENST00000420043 C5P01031 1676 aa12.86□□□□□ -0.35
PHF3-203ENST00000420043 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 CHD1LQ86WJ1 897 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 NLGN2Q8NFZ4 835 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 BACH2Q9BYV9 841 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 LY75O60449 1722 aa12.85□□□□□ -0.35
PHF3-203ENST00000420043 KCPQ6ZWJ8 1503 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 ZNF784Q8NCA9 323 aaPredicted RBP12.84□□□□□ -0.35
PHF3-203ENST00000420043 LINS1Q8NG48 757 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 USP44Q9H0E7 712 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
PHF3-203ENST00000420043 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
PHF3-203ENST00000420043 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
PHF3-203ENST00000420043 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 STARD3NLO95772 234 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 ATP8B2P98198 1209 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
PHF3-203ENST00000420043 N4BP2Q86UW6 1770 aaPredicted RBP12.82□□□□□ -0.36
PHF3-203ENST00000420043 PIP4K2AP48426 406 aaPredicted RBP12.82□□□□□ -0.36
PHF3-203ENST00000420043 MYD88Q99836 296 aa12.82□□□□□ -0.36
PHF3-203ENST00000420043 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
PHF3-203ENST00000420043 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
PHF3-203ENST00000420043 PHF14O94880 888 aa12.81□□□□□ -0.36
PHF3-203ENST00000420043 A1BGP04217 495 aa12.81□□□□□ -0.36
PHF3-203ENST00000420043 PLBD2Q8NHP8 589 aa12.81□□□□□ -0.36
PHF3-203ENST00000420043 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
PHF3-203ENST00000420043 APBB1O00213 710 aa12.8□□□□□ -0.36
PHF3-203ENST00000420043 GRM8O00222 908 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms