RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BEND3Q5T5X7 828 aa18.01■□□□□ 0.47
SHMT1P1-201ENST00000419974 KAT6BQ8WYB5 2073 aa18.01■□□□□ 0.47
SHMT1P1-201ENST00000419974 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
SHMT1P1-201ENST00000419974 ANXA1P04083 346 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 EIF5P55010 431 aaKnown RBP18■□□□□ 0.47
SHMT1P1-201ENST00000419974 SLC15A2Q16348 729 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 SLC27A3Q5K4L6 730 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 INTS5Q6P9B9 1019 aaKnown RBP18■□□□□ 0.47
SHMT1P1-201ENST00000419974 LINS1Q8NG48 757 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 XAGE3Q8WTP9 111 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 SPON1Q9HCB6 807 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 LY75O60449 1722 aa18■□□□□ 0.47
SHMT1P1-201ENST00000419974 F6X3S4 739 aa17.99■□□□□ 0.47
SHMT1P1-201ENST00000419974 ITPK1Q13572 414 aa17.99■□□□□ 0.47
SHMT1P1-201ENST00000419974 SRCIN1Q9C0H9 1055 aa17.99■□□□□ 0.47
SHMT1P1-201ENST00000419974 CCDC87Q9NVE4 849 aa17.99■□□□□ 0.47
SHMT1P1-201ENST00000419974 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
SHMT1P1-201ENST00000419974 MYL6BP14649 208 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 MAP3K2Q9Y2U5 619 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 UTYO14607 1347 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 COL5A3P25940 1745 aaPredicted RBP17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 ERVV-1B6SEH8 477 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 GNAI3P08754 354 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 CCDC136Q96JN2 1154 aa17.98■□□□□ 0.47
SHMT1P1-201ENST00000419974 CRKLP46109 303 aaKnown RBP17.97■□□□□ 0.47
SHMT1P1-201ENST00000419974 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
SHMT1P1-201ENST00000419974 RIC3Q7Z5B4 369 aa17.97■□□□□ 0.47
SHMT1P1-201ENST00000419974 HDAC5Q9UQL6 1122 aa17.97■□□□□ 0.47
SHMT1P1-201ENST00000419974 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
SHMT1P1-201ENST00000419974 NEXNQ0ZGT2 675 aa17.96■□□□□ 0.46
SHMT1P1-201ENST00000419974 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.46
SHMT1P1-201ENST00000419974 LRRC4BQ9NT99 713 aa17.96■□□□□ 0.46
SHMT1P1-201ENST00000419974 KDM2BQ8NHM5 1336 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 COL15A1P39059 1388 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 CASZ1Q86V15 1759 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 RPAP2Q8IXW5 612 aaPredicted RBP17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 USP44Q9H0E7 712 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 PCDHB15Q9Y5E8 787 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
SHMT1P1-201ENST00000419974 IGKV5-2P06315 115 aa17.94■□□□□ 0.46
SHMT1P1-201ENST00000419974 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
SHMT1P1-201ENST00000419974 CENPQQ7L2Z9 268 aaPredicted RBP17.94■□□□□ 0.46
SHMT1P1-201ENST00000419974 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
SHMT1P1-201ENST00000419974 A0A087WZG4 1122 aa17.93■□□□□ 0.46
SHMT1P1-201ENST00000419974 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
SHMT1P1-201ENST00000419974 B4GALNT3Q6L9W6 998 aa17.93■□□□□ 0.46
SHMT1P1-201ENST00000419974 TTLL7Q6ZT98 887 aa17.93■□□□□ 0.46
SHMT1P1-201ENST00000419974 NEURL1BA8MQ27 555 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 RPS6KA4O75676 772 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 KIF6Q6ZMV9 814 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 MEIS3Q99687 375 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 RWDD1Q9H446 243 aaPredicted RBP17.92■□□□□ 0.46
SHMT1P1-201ENST00000419974 GNAI2P04899 355 aa17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 TCIRG1Q13488 830 aa17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 CLEC4GQ6UXB4 293 aa17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 MTFR1LQ9H019 292 aa17.91■□□□□ 0.46
SHMT1P1-201ENST00000419974 ADRA2BP18089 450 aa17.9■□□□□ 0.46
SHMT1P1-201ENST00000419974 GCKRQ14397 625 aa17.9■□□□□ 0.46
SHMT1P1-201ENST00000419974 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
SHMT1P1-201ENST00000419974 ANKRD44Q8N8A2 993 aa17.9■□□□□ 0.46
SHMT1P1-201ENST00000419974 ARFGEF2Q9Y6D5 1785 aa17.9■□□□□ 0.46
SHMT1P1-201ENST00000419974 GRM8O00222 908 aa17.89■□□□□ 0.45
SHMT1P1-201ENST00000419974 PTGER2P43116 358 aa17.89■□□□□ 0.45
SHMT1P1-201ENST00000419974 PPP1R1BQ9UD71 204 aaPredicted RBP17.89■□□□□ 0.45
SHMT1P1-201ENST00000419974 UBTFL1P0CB47 393 aaPredicted RBP17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 MTX1Q13505 466 aa17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 ZNF827Q17R98 1081 aa17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 SLC16A10Q8TF71 515 aa17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 MYD88Q99836 296 aa17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 MYH14Q7Z406 1995 aaKnown RBP17.88■□□□□ 0.45
SHMT1P1-201ENST00000419974 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
SHMT1P1-201ENST00000419974 ZBTB7AO95365 584 aa17.87■□□□□ 0.45
SHMT1P1-201ENST00000419974 CEP85Q6P2H3 762 aa17.87■□□□□ 0.45
SHMT1P1-201ENST00000419974 TAF1LQ8IZX4 1826 aa17.87■□□□□ 0.45
SHMT1P1-201ENST00000419974 C4BP0C0L5 1744 aa17.87■□□□□ 0.45
SHMT1P1-201ENST00000419974 H7C1W4 665 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 IGHDP01880 384 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 SIRT2Q8IXJ6 389 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 SGIP1Q9BQI5 828 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 C9orf78Q9NZ63 289 aaPredicted RBP17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 QSER1Q2KHR3 1735 aa17.86■□□□□ 0.45
SHMT1P1-201ENST00000419974 NBPF7P0C2Y1 421 aaPredicted RBP17.85■□□□□ 0.45
SHMT1P1-201ENST00000419974 CASP7P55210 303 aa17.85■□□□□ 0.45
SHMT1P1-201ENST00000419974 ATP8B2P98198 1209 aa17.85■□□□□ 0.45
SHMT1P1-201ENST00000419974 ZNF34Q8IZ26 560 aa17.85■□□□□ 0.45
SHMT1P1-201ENST00000419974 GCC1Q96CN9 775 aa17.85■□□□□ 0.45
SHMT1P1-201ENST00000419974 ZBTB3Q9H5J0 574 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms