RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 OTUD7AQ8TE49 926 aaPredicted RBP10.1□□□□□ -0.79
COL12A1-204ENST00000419671 EXOC6BQ9Y2D4 811 aa10.1□□□□□ -0.79
COL12A1-204ENST00000419671 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
COL12A1-204ENST00000419671 DOT1LQ8TEK3 1739 aa10.1□□□□□ -0.79
COL12A1-204ENST00000419671 AK9Q5TCS8 1911 aa10.1□□□□□ -0.79
COL12A1-204ENST00000419671 MYL6BP14649 208 aa10.09□□□□□ -0.79
COL12A1-204ENST00000419671 GSPT1P15170 499 aaKnown RBP10.09□□□□□ -0.79
COL12A1-204ENST00000419671 AIMP1Q12904 312 aaKnown RBP10.09□□□□□ -0.79
COL12A1-204ENST00000419671 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
COL12A1-204ENST00000419671 TBC1D32Q96NH3 1257 aa10.09□□□□□ -0.79
COL12A1-204ENST00000419671 LRP6O75581 1613 aa10.09□□□□□ -0.79
COL12A1-204ENST00000419671 IBTKQ9P2D0 1353 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-204ENST00000419671 PIP4K2AP48426 406 aaPredicted RBP10.09□□□□□ -0.79
COL12A1-204ENST00000419671 CWF19L2Q2TBE0 894 aaKnown RBP10.09□□□□□ -0.79
COL12A1-204ENST00000419671 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
COL12A1-204ENST00000419671 ALDH1L1O75891 902 aa10.08□□□□□ -0.8
COL12A1-204ENST00000419671 DDX58O95786 925 aaKnown RBP10.08□□□□□ -0.8
COL12A1-204ENST00000419671 COPS6Q7L5N1 327 aa10.08□□□□□ -0.8
COL12A1-204ENST00000419671 BCL11BQ9C0K0 894 aaPredicted RBP10.08□□□□□ -0.8
COL12A1-204ENST00000419671 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 PPP1R42Q7Z4L9 355 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 LINS1Q8NG48 757 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 XAGE3Q8WTP9 111 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 TJP1Q07157 1748 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 UTYO14607 1347 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 SALL3Q9BXA9 1300 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 MFAP1P55081 439 aaKnown RBP10.07□□□□□ -0.8
COL12A1-204ENST00000419671 HS6ST3Q8IZP7 471 aa10.07□□□□□ -0.8
COL12A1-204ENST00000419671 UPF2Q9HAU5 1272 aaKnown RBP10.07□□□□□ -0.8
COL12A1-204ENST00000419671 NBPF26B4DH59 902 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 ADAMTS2O95450 1211 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 NBPF14Q5TI25 921 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 NBPF10Q6P3W6 841 aaKnown RBP10.06□□□□□ -0.8
COL12A1-204ENST00000419671 TBC1D9Q6ZT07 1266 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 LRRCC1Q9C099 1032 aa10.06□□□□□ -0.8
COL12A1-204ENST00000419671 GRM8O00222 908 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 SRGAP3O43295 1099 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 PTCD1O75127 700 aaKnown RBP10.05□□□□□ -0.8
COL12A1-204ENST00000419671 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 MTX1Q13505 466 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 RNF25Q96BH1 459 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-204ENST00000419671 KAZALD1Q96I82 304 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 METTL22Q9BUU2 404 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-204ENST00000419671 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 C9orf78Q9NZ63 289 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-204ENST00000419671 NEURL1BA8MQ27 555 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 TOM1O60784 492 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 C22orf23Q9BZE7 217 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 TMOD3Q9NYL9 352 aa10.05□□□□□ -0.8
COL12A1-204ENST00000419671 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 PDE1AP54750 535 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SPDYE2Q495Y8 402 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 PIGBQ92521 554 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 ASAP1Q9ULH1 1129 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SLIT2O94813 1529 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 BCL9O00512 1426 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SPATA31A1Q5TZJ5 1347 aa10.04□□□□□ -0.8
COL12A1-204ENST00000419671 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
COL12A1-204ENST00000419671 A1BGP04217 495 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 SDSP20132 328 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 GCKRQ14397 625 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 SUCLG2Q96I99 432 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 MYD88Q99836 296 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 CDC45O75419 566 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 NEXNQ0ZGT2 675 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 TSHZ3Q63HK5 1081 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 IL1RAPL2Q9NP60 686 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 ATG3Q9NT62 314 aa10.03□□□□□ -0.8
COL12A1-204ENST00000419671 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-204ENST00000419671 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-204ENST00000419671 EXOC5O00471 708 aa10.02□□□□□ -0.81
COL12A1-204ENST00000419671 RAB11FIP3O75154 756 aa10.02□□□□□ -0.81
COL12A1-204ENST00000419671 MX1P20591 662 aa10.02□□□□□ -0.81
COL12A1-204ENST00000419671 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
COL12A1-204ENST00000419671 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
COL12A1-204ENST00000419671 BICC1Q9H694 974 aaKnown RBP10.02□□□□□ -0.81
COL12A1-204ENST00000419671 NUP98P52948 1817 aa10.02□□□□□ -0.81
COL12A1-204ENST00000419671 TTLL7Q6ZT98 887 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 RHPN1Q8TCX5 695 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 STAP2Q9UGK3 403 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 HDAC5Q9UQL6 1122 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
COL12A1-204ENST00000419671 KIF1BPQ96EK5 621 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
COL12A1-204ENST00000419671 UBAP1LF5GYI3 381 aa10□□□□□ -0.81
COL12A1-204ENST00000419671 ATP5J2-PTCD1G3V325 749 aa10□□□□□ -0.81
COL12A1-204ENST00000419671 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
COL12A1-204ENST00000419671 PA2G4Q9UQ80 394 aaKnown RBP10□□□□□ -0.81
COL12A1-204ENST00000419671 COL15A1P39059 1388 aa10□□□□□ -0.81
COL12A1-204ENST00000419671 CASP7P55210 303 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms