RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 MASTLQ96GX5 879 aa19.14■□□□□ 0.65
TTC38-202ENST00000417709 PER1O15534 1290 aaPredicted RBP19.13■□□□□ 0.65
TTC38-202ENST00000417709 DZIP3Q86Y13 1208 aaKnown RBP19.13■□□□□ 0.65
TTC38-202ENST00000417709 LTBP3Q9NS15 1303 aa19.13■□□□□ 0.65
TTC38-202ENST00000417709 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
TTC38-202ENST00000417709 GAS2L2Q8NHY3 880 aa19.12■□□□□ 0.65
TTC38-202ENST00000417709 CLEC11AQ9Y240 323 aa19.12■□□□□ 0.65
TTC38-202ENST00000417709 USP16Q9Y5T5 823 aa19.12■□□□□ 0.65
TTC38-202ENST00000417709 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
TTC38-202ENST00000417709 FOXN1O15353 648 aa19.11■□□□□ 0.65
TTC38-202ENST00000417709 EAPPQ56P03 285 aaPredicted RBP19.11■□□□□ 0.65
TTC38-202ENST00000417709 SOGA3Q5TF21 947 aa19.11■□□□□ 0.65
TTC38-202ENST00000417709 NBPF5PQ86XG9 351 aaPredicted RBP19.11■□□□□ 0.65
TTC38-202ENST00000417709 COL11A2P13942 1736 aaPredicted RBP19.11■□□□□ 0.65
TTC38-202ENST00000417709 IQCA1LA6NCM1 817 aa19.1■□□□□ 0.65
TTC38-202ENST00000417709 C7orf43Q8WVR3 580 aa19.1■□□□□ 0.65
TTC38-202ENST00000417709 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
TTC38-202ENST00000417709 TAF1DQ9H5J8 278 aaPredicted RBP19.1■□□□□ 0.65
TTC38-202ENST00000417709 FAM177BA6PVY3 158 aa19.09■□□□□ 0.65
TTC38-202ENST00000417709 VEGFBP49765 207 aa19.09■□□□□ 0.65
TTC38-202ENST00000417709 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
TTC38-202ENST00000417709 LDHDQ86WU2 507 aa19.09■□□□□ 0.65
TTC38-202ENST00000417709 ZNF277Q9NRM2 450 aaPredicted RBP19.09■□□□□ 0.65
TTC38-202ENST00000417709 PRAMEF22A3QJZ6 481 aa19.08■□□□□ 0.64
TTC38-202ENST00000417709 CCER1Q8TC90 406 aaPredicted RBP19.08■□□□□ 0.64
TTC38-202ENST00000417709 PASKQ96RG2 1323 aa19.07■□□□□ 0.64
TTC38-202ENST00000417709 TMEM88BA6NKF7 163 aa19.07■□□□□ 0.64
TTC38-202ENST00000417709 ITGBL1O95965 494 aaPredicted RBP19.07■□□□□ 0.64
TTC38-202ENST00000417709 NPR1P16066 1061 aa19.07■□□□□ 0.64
TTC38-202ENST00000417709 CCDC93Q567U6 631 aa19.07■□□□□ 0.64
TTC38-202ENST00000417709 AIDAQ96BJ3 306 aa19.07■□□□□ 0.64
TTC38-202ENST00000417709 CNTNAP1P78357 1384 aa19.06■□□□□ 0.64
TTC38-202ENST00000417709 CLEC4GQ6UXB4 293 aa19.06■□□□□ 0.64
TTC38-202ENST00000417709 TPTE2Q6XPS3 522 aa19.06■□□□□ 0.64
TTC38-202ENST00000417709 L3MBTL3Q96JM7 780 aaPredicted RBP19.06■□□□□ 0.64
TTC38-202ENST00000417709 FKBP4Q02790 459 aaKnown RBP eCLIP19.05■□□□□ 0.64
TTC38-202ENST00000417709 HACL1Q9UJ83 578 aa19.05■□□□□ 0.64
TTC38-202ENST00000417709 NIP7Q9Y221 180 aaKnown RBP eCLIP19.05■□□□□ 0.64
TTC38-202ENST00000417709 SCN4AP35499 1836 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 ZNF541Q9H0D2 1346 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 SIPA1L3O60292 1781 aaPredicted RBP19.04■□□□□ 0.64
TTC38-202ENST00000417709 SNRPA1P09661 255 aaKnown RBP19.04■□□□□ 0.64
TTC38-202ENST00000417709 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 CTCFP49711 727 aaPredicted RBP19.04■□□□□ 0.64
TTC38-202ENST00000417709 SYNE4Q8N205 404 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 PRDM10Q9NQV6 1147 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 ZNF652Q9Y2D9 606 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 SCN7AQ01118 1682 aa19.04■□□□□ 0.64
TTC38-202ENST00000417709 GTF2E1P29083 439 aaPredicted RBP19.03■□□□□ 0.64
TTC38-202ENST00000417709 EPHX2P34913 555 aa19.03■□□□□ 0.64
TTC38-202ENST00000417709 MCM10Q7L590 875 aa19.03■□□□□ 0.64
TTC38-202ENST00000417709 RTKN2Q8IZC4 609 aa19.03■□□□□ 0.64
TTC38-202ENST00000417709 KLRG2A4D1S0 409 aaPredicted RBP19.02■□□□□ 0.64
TTC38-202ENST00000417709 NBPF26B4DH59 902 aa19.02■□□□□ 0.64
TTC38-202ENST00000417709 LBX1P52954 281 aa19.02■□□□□ 0.64
TTC38-202ENST00000417709 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
TTC38-202ENST00000417709 NBPF10Q6P3W6 841 aaKnown RBP19.02■□□□□ 0.64
TTC38-202ENST00000417709 CNTROBQ8N137 903 aa19.02■□□□□ 0.64
TTC38-202ENST00000417709 NBPF15Q8N660 670 aa19.02■□□□□ 0.64
TTC38-202ENST00000417709 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
TTC38-202ENST00000417709 ALDH1B1P30837 517 aa19.01■□□□□ 0.63
TTC38-202ENST00000417709 DEFB115Q30KQ5 88 aa19.01■□□□□ 0.63
TTC38-202ENST00000417709 RTF1Q92541 710 aaKnown RBP19.01■□□□□ 0.63
TTC38-202ENST00000417709 WBP1LQ9NX94 342 aa19.01■□□□□ 0.63
TTC38-202ENST00000417709 IARSP41252 1262 aaKnown RBP19■□□□□ 0.63
TTC38-202ENST00000417709 DCTN1Q14203 1278 aa19■□□□□ 0.63
TTC38-202ENST00000417709 HLFQ16534 295 aa19■□□□□ 0.63
TTC38-202ENST00000417709 PNMA8AQ86V59 439 aaPredicted RBP19■□□□□ 0.63
TTC38-202ENST00000417709 NGEFQ8N5V2 710 aa19■□□□□ 0.63
TTC38-202ENST00000417709 RNF123Q5XPI4 1314 aa19■□□□□ 0.63
TTC38-202ENST00000417709 RSPH6AQ9H0K4 717 aa18.99■□□□□ 0.63
TTC38-202ENST00000417709 MIS18AQ9NYP9 233 aa18.99■□□□□ 0.63
TTC38-202ENST00000417709 GJA3Q9Y6H8 435 aa18.99■□□□□ 0.63
TTC38-202ENST00000417709 ARFGEF2Q9Y6D5 1785 aa18.98■□□□□ 0.63
TTC38-202ENST00000417709 COL3A1P02461 1466 aaPredicted RBP18.98■□□□□ 0.63
TTC38-202ENST00000417709 FZD9O00144 591 aa18.98■□□□□ 0.63
TTC38-202ENST00000417709 JDP2Q8WYK2 163 aa18.98■□□□□ 0.63
TTC38-202ENST00000417709 CFAP53Q96M91 514 aa18.98■□□□□ 0.63
TTC38-202ENST00000417709 ABT1Q9ULW3 272 aaKnown RBP18.98■□□□□ 0.63
TTC38-202ENST00000417709 U2AF1L5P0DN76 240 aaPredicted RBP18.97■□□□□ 0.63
TTC38-202ENST00000417709 U2AF1Q01081 240 aaKnown RBP eCLIP18.97■□□□□ 0.63
TTC38-202ENST00000417709 GPC2Q8N158 579 aa18.97■□□□□ 0.63
TTC38-202ENST00000417709 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
TTC38-202ENST00000417709 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
TTC38-202ENST00000417709 TCERG1O14776 1098 aaKnown RBP18.96■□□□□ 0.63
TTC38-202ENST00000417709 WDR33Q9C0J8 1336 aaKnown RBP18.96■□□□□ 0.63
TTC38-202ENST00000417709 RASSF10A6NK89 507 aa18.95■□□□□ 0.62
TTC38-202ENST00000417709 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
TTC38-202ENST00000417709 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
TTC38-202ENST00000417709 NUTM1Q86Y26 1132 aa18.95■□□□□ 0.62
TTC38-202ENST00000417709 EIF6P56537 245 aaKnown RBP18.94■□□□□ 0.62
TTC38-202ENST00000417709 HSPA8P11142 646 aaKnown RBP18.93■□□□□ 0.62
TTC38-202ENST00000417709 MAP2K1Q02750 393 aaPredicted RBP18.93■□□□□ 0.62
TTC38-202ENST00000417709 GRM1Q13255 1194 aa18.93■□□□□ 0.62
TTC38-202ENST00000417709 PAXIP1Q6ZW49 1069 aaPredicted RBP18.93■□□□□ 0.62
TTC38-202ENST00000417709 DDX21Q9NR30 783 aaKnown RBP eCLIP18.93■□□□□ 0.62
TTC38-202ENST00000417709 RRP7AQ9Y3A4 280 aaKnown RBP18.93■□□□□ 0.62
TTC38-202ENST00000417709 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
TTC38-202ENST00000417709 LMOD1P29536 600 aaPredicted RBP18.92■□□□□ 0.62
TTC38-202ENST00000417709 EPS15P42566 896 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms