RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 GRM8O00222 908 aa23.82■■□□□ 1.4
RAB3IP-205ENST00000417413 TBC1D32Q96NH3 1257 aa23.82■■□□□ 1.4
RAB3IP-205ENST00000417413 LRRCC1Q9C099 1032 aa23.82■■□□□ 1.4
RAB3IP-205ENST00000417413 HDAC5Q9UQL6 1122 aa23.82■■□□□ 1.4
RAB3IP-205ENST00000417413 NEURL1BA8MQ27 555 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 NEXNQ0ZGT2 675 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 UPF2Q9HAU5 1272 aaKnown RBP23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 BCL9O00512 1426 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 DOT1LQ8TEK3 1739 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 TUBGCP6Q96RT7 1819 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 SALL3Q9BXA9 1300 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 SRGAP3O43295 1099 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 MYD88Q99836 296 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 OSBPL3Q9H4L5 887 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 ATG3Q9NT62 314 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 ASAP1Q9ULH1 1129 aa23.81■■□□□ 1.4
RAB3IP-205ENST00000417413 A1BGP04217 495 aa23.8■■□□□ 1.4
RAB3IP-205ENST00000417413 PLBD2Q8NHP8 589 aa23.8■■□□□ 1.4
RAB3IP-205ENST00000417413 GCKRQ14397 625 aa23.79■■□□□ 1.4
RAB3IP-205ENST00000417413 VSIG10Q8N0Z9 540 aa23.79■■□□□ 1.4
RAB3IP-205ENST00000417413 KAZALD1Q96I82 304 aa23.79■■□□□ 1.4
RAB3IP-205ENST00000417413 RAB11FIP3O75154 756 aa23.78■■□□□ 1.4
RAB3IP-205ENST00000417413 FAM98CQ17RN3 349 aaKnown RBP23.78■■□□□ 1.4
RAB3IP-205ENST00000417413 SUCLG2Q96I99 432 aa23.78■■□□□ 1.4
RAB3IP-205ENST00000417413 BCL11AQ9H165 835 aa23.78■■□□□ 1.4
RAB3IP-205ENST00000417413 GJD4Q96KN9 370 aaPredicted RBP23.77■■□□□ 1.4
RAB3IP-205ENST00000417413 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.77■■□□□ 1.4
RAB3IP-205ENST00000417413 SURF6O75683 361 aaKnown RBP23.77■■□□□ 1.4
RAB3IP-205ENST00000417413 PDE1AP54750 535 aa23.77■■□□□ 1.4
RAB3IP-205ENST00000417413 MFAP1P55081 439 aaKnown RBP23.77■■□□□ 1.4
RAB3IP-205ENST00000417413 A0A0G2JS52 829 aa23.76■■□□□ 1.39
RAB3IP-205ENST00000417413 MYT1Q01538 1121 aa23.76■■□□□ 1.39
RAB3IP-205ENST00000417413 TBC1D9Q6ZT07 1266 aa23.76■■□□□ 1.39
RAB3IP-205ENST00000417413 CDC45O75419 566 aa23.75■■□□□ 1.39
RAB3IP-205ENST00000417413 TTLL7Q6ZT98 887 aa23.75■■□□□ 1.39
RAB3IP-205ENST00000417413 ERICH6Q7L0X2 663 aa23.75■■□□□ 1.39
RAB3IP-205ENST00000417413 TEX13AQ9BXU3 409 aaPredicted RBP23.75■■□□□ 1.39
RAB3IP-205ENST00000417413 KAT6BQ8WYB5 2073 aa23.74■■□□□ 1.39
RAB3IP-205ENST00000417413 DNAJC10Q8IXB1 793 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 RHPN1Q8TCX5 695 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 BICC1Q9H694 974 aaKnown RBP23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 STAP2Q9UGK3 403 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 ATRNO75882 1429 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 ZNF772Q68DY9 489 aaPredicted RBP23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 C22orf23Q9BZE7 217 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 TJP1Q07157 1748 aa23.73■■□□□ 1.39
RAB3IP-205ENST00000417413 SDSP20132 328 aa23.72■■□□□ 1.39
RAB3IP-205ENST00000417413 HSP90AB4PQ58FF6 505 aa23.72■■□□□ 1.39
RAB3IP-205ENST00000417413 KIF1BPQ96EK5 621 aa23.72■■□□□ 1.39
RAB3IP-205ENST00000417413 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
RAB3IP-205ENST00000417413 COL15A1P39059 1388 aa23.72■■□□□ 1.39
RAB3IP-205ENST00000417413 MX1P20591 662 aa23.71■■□□□ 1.39
RAB3IP-205ENST00000417413 PRIM1P49642 420 aaKnown RBP23.71■■□□□ 1.39
RAB3IP-205ENST00000417413 ATP5J2-PTCD1G3V325 749 aa23.7■■□□□ 1.39
RAB3IP-205ENST00000417413 MARCH10Q8NA82 808 aaPredicted RBP23.7■■□□□ 1.39
RAB3IP-205ENST00000417413 SLC4A9Q96Q91 983 aa23.7■■□□□ 1.39
RAB3IP-205ENST00000417413 RBM42Q9BTD8 480 aaKnown RBP23.7■■□□□ 1.39
RAB3IP-205ENST00000417413 IL1RAPL2Q9NP60 686 aa23.7■■□□□ 1.39
RAB3IP-205ENST00000417413 CASP7P55210 303 aa23.69■■□□□ 1.38
RAB3IP-205ENST00000417413 EPHA10Q5JZY3 1008 aa23.69■■□□□ 1.38
RAB3IP-205ENST00000417413 AOX1Q06278 1338 aa23.68■■□□□ 1.38
RAB3IP-205ENST00000417413 STARD3NLO95772 234 aa23.68■■□□□ 1.38
RAB3IP-205ENST00000417413 ONECUT3O60422 494 aaPredicted RBP23.67■■□□□ 1.38
RAB3IP-205ENST00000417413 RBM25P49756 843 aaKnown RBP23.67■■□□□ 1.38
RAB3IP-205ENST00000417413 SYTL4Q96C24 671 aaPredicted RBP23.67■■□□□ 1.38
RAB3IP-205ENST00000417413 PA2G4Q9UQ80 394 aaKnown RBP23.67■■□□□ 1.38
RAB3IP-205ENST00000417413 H7C1W4 665 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 SLC4A3P48751 1232 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 A0A087WZG4 1122 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 CYP19A1P11511 503 aaPredicted RBP23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 TSHZ3Q63HK5 1081 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 UBE3BQ7Z3V4 1068 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 JARID2Q92833 1246 aaPredicted RBP23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 ZBTB3Q9H5J0 574 aa23.66■■□□□ 1.38
RAB3IP-205ENST00000417413 RABL6Q3YEC7 729 aaPredicted RBP23.65■■□□□ 1.38
RAB3IP-205ENST00000417413 NUTM1Q86Y26 1132 aa23.65■■□□□ 1.38
RAB3IP-205ENST00000417413 ANP32EQ9BTT0 268 aa23.65■■□□□ 1.38
RAB3IP-205ENST00000417413 ERC1Q8IUD2 1116 aa23.64■■□□□ 1.38
RAB3IP-205ENST00000417413 CICQ96RK0 1608 aaPredicted RBP23.63■■□□□ 1.37
RAB3IP-205ENST00000417413 CWC25Q9NXE8 425 aaPredicted RBP23.63■■□□□ 1.37
RAB3IP-205ENST00000417413 EIF5BO60841 1220 aaKnown RBP23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 OS9Q13438 667 aaPredicted RBP23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 CCDC191Q8NCU4 936 aa23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 ISCA1Q9BUE6 129 aa23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 USP42Q9H9J4 1324 aaKnown RBP23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 AK9Q5TCS8 1911 aa23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 RFX5P48382 616 aaPredicted RBP23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 DAXXQ9UER7 740 aaPredicted RBP23.62■■□□□ 1.37
RAB3IP-205ENST00000417413 SASH1O94885 1247 aa23.61■■□□□ 1.37
RAB3IP-205ENST00000417413 SEPT12Q8IYM1 358 aa23.61■■□□□ 1.37
RAB3IP-205ENST00000417413 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
RAB3IP-205ENST00000417413 ANKRD36CQ5JPF3 1778 aa23.6■■□□□ 1.37
RAB3IP-205ENST00000417413 RBM6P78332 1123 aaKnown RBP23.6■■□□□ 1.37
RAB3IP-205ENST00000417413 TCIRG1Q13488 830 aa23.6■■□□□ 1.37
RAB3IP-205ENST00000417413 PI4K2BQ8TCG2 481 aa23.6■■□□□ 1.37
RAB3IP-205ENST00000417413 RREB1Q92766 1687 aa23.6■■□□□ 1.37
RAB3IP-205ENST00000417413 FOXO4P98177 505 aa23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 G3BP1Q13283 466 aaKnown RBP eCLIP23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 CASC1Q6TDU7 716 aa23.59■■□□□ 1.37
RAB3IP-205ENST00000417413 COPRSQ9NQ92 184 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms