RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 PASKQ96RG2 1323 aa21.09■□□□□ 0.97
HLA-DPB1-210ENST00000416804 L3MBTL3Q96JM7 780 aaPredicted RBP21.09■□□□□ 0.97
HLA-DPB1-210ENST00000416804 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
HLA-DPB1-210ENST00000416804 A1BGP04217 495 aa21.08■□□□□ 0.96
HLA-DPB1-210ENST00000416804 PRDM10Q9NQV6 1147 aa21.08■□□□□ 0.96
HLA-DPB1-210ENST00000416804 CCDC93Q567U6 631 aa21.07■□□□□ 0.96
HLA-DPB1-210ENST00000416804 DZIP3Q86Y13 1208 aaKnown RBP21.07■□□□□ 0.96
HLA-DPB1-210ENST00000416804 TAF1DQ9H5J8 278 aaPredicted RBP21.07■□□□□ 0.96
HLA-DPB1-210ENST00000416804 SLX4Q8IY92 1834 aa21.07■□□□□ 0.96
HLA-DPB1-210ENST00000416804 ARFGEF2Q9Y6D5 1785 aa21.06■□□□□ 0.96
HLA-DPB1-210ENST00000416804 FOXN1O15353 648 aa21.06■□□□□ 0.96
HLA-DPB1-210ENST00000416804 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
HLA-DPB1-210ENST00000416804 AIDAQ96BJ3 306 aa21.05■□□□□ 0.96
HLA-DPB1-210ENST00000416804 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
HLA-DPB1-210ENST00000416804 SIPA1L3O60292 1781 aaPredicted RBP21.05■□□□□ 0.96
HLA-DPB1-210ENST00000416804 SCN4AP35499 1836 aa21.05■□□□□ 0.96
HLA-DPB1-210ENST00000416804 COL3A1P02461 1466 aaPredicted RBP21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 KIF7Q2M1P5 1343 aa21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 TMEM88BA6NKF7 163 aa21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 C7orf43Q8WVR3 580 aa21.04■□□□□ 0.96
HLA-DPB1-210ENST00000416804 BCORQ6W2J9 1755 aa21.03■□□□□ 0.96
HLA-DPB1-210ENST00000416804 PER1O15534 1290 aaPredicted RBP21.03■□□□□ 0.96
HLA-DPB1-210ENST00000416804 NPR1P16066 1061 aa21.03■□□□□ 0.96
HLA-DPB1-210ENST00000416804 CTCFP49711 727 aaPredicted RBP21.03■□□□□ 0.96
HLA-DPB1-210ENST00000416804 ZNF652Q9Y2D9 606 aa21.03■□□□□ 0.96
HLA-DPB1-210ENST00000416804 BTBD11A6QL63 1104 aa21.02■□□□□ 0.96
HLA-DPB1-210ENST00000416804 FKBP4Q02790 459 aaKnown RBP eCLIP21.02■□□□□ 0.96
HLA-DPB1-210ENST00000416804 ITGBL1O95965 494 aaPredicted RBP21.01■□□□□ 0.95
HLA-DPB1-210ENST00000416804 HACL1Q9UJ83 578 aa21.01■□□□□ 0.95
HLA-DPB1-210ENST00000416804 CACNA1SQ13698 1873 aa21.01■□□□□ 0.95
HLA-DPB1-210ENST00000416804 KLRG2A4D1S0 409 aaPredicted RBP21■□□□□ 0.95
HLA-DPB1-210ENST00000416804 RGL2O15211 777 aa21■□□□□ 0.95
HLA-DPB1-210ENST00000416804 VEGFBP49765 207 aa21■□□□□ 0.95
HLA-DPB1-210ENST00000416804 ZNF541Q9H0D2 1346 aa21■□□□□ 0.95
HLA-DPB1-210ENST00000416804 KCNQ3O43525 872 aa20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 EAPPQ56P03 285 aaPredicted RBP20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 TPTE2Q6XPS3 522 aa20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 RTKN2Q8IZC4 609 aa20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 USP16Q9Y5T5 823 aa20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 NPC1L1Q9UHC9 1359 aa20.99■□□□□ 0.95
HLA-DPB1-210ENST00000416804 PNMA8AQ86V59 439 aaPredicted RBP20.98■□□□□ 0.95
HLA-DPB1-210ENST00000416804 ZNF277Q9NRM2 450 aaPredicted RBP20.98■□□□□ 0.95
HLA-DPB1-210ENST00000416804 WBP1LQ9NX94 342 aa20.98■□□□□ 0.95
HLA-DPB1-210ENST00000416804 CLEC11AQ9Y240 323 aa20.98■□□□□ 0.95
HLA-DPB1-210ENST00000416804 EPHX2P34913 555 aa20.97■□□□□ 0.95
HLA-DPB1-210ENST00000416804 SNRPA1P09661 255 aaKnown RBP20.97■□□□□ 0.95
HLA-DPB1-210ENST00000416804 PIP4K2AP48426 406 aaPredicted RBP20.97■□□□□ 0.95
HLA-DPB1-210ENST00000416804 RASSF10A6NK89 507 aa20.96■□□□□ 0.95
HLA-DPB1-210ENST00000416804 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
HLA-DPB1-210ENST00000416804 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.95
HLA-DPB1-210ENST00000416804 FZD9O00144 591 aa20.95■□□□□ 0.94
HLA-DPB1-210ENST00000416804 ALDH1B1P30837 517 aa20.95■□□□□ 0.94
HLA-DPB1-210ENST00000416804 PRKAR2BP31323 418 aa20.95■□□□□ 0.94
HLA-DPB1-210ENST00000416804 IARSP41252 1262 aaKnown RBP20.95■□□□□ 0.94
HLA-DPB1-210ENST00000416804 CNTROBQ8N137 903 aa20.95■□□□□ 0.94
HLA-DPB1-210ENST00000416804 RNF123Q5XPI4 1314 aa20.94■□□□□ 0.94
HLA-DPB1-210ENST00000416804 LBX1P52954 281 aa20.94■□□□□ 0.94
HLA-DPB1-210ENST00000416804 DEFB115Q30KQ5 88 aa20.94■□□□□ 0.94
HLA-DPB1-210ENST00000416804 GPC2Q8N158 579 aa20.94■□□□□ 0.94
HLA-DPB1-210ENST00000416804 PHACTR3Q96KR7 559 aa20.94■□□□□ 0.94
HLA-DPB1-210ENST00000416804 PRAMEF22A3QJZ6 481 aa20.93■□□□□ 0.94
HLA-DPB1-210ENST00000416804 SYNE4Q8N205 404 aa20.93■□□□□ 0.94
HLA-DPB1-210ENST00000416804 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
HLA-DPB1-210ENST00000416804 MAP2K1Q02750 393 aaPredicted RBP20.92■□□□□ 0.94
HLA-DPB1-210ENST00000416804 OLFM4Q6UX06 510 aa20.92■□□□□ 0.94
HLA-DPB1-210ENST00000416804 JDP2Q8WYK2 163 aa20.92■□□□□ 0.94
HLA-DPB1-210ENST00000416804 RTF1Q92541 710 aaKnown RBP20.92■□□□□ 0.94
HLA-DPB1-210ENST00000416804 NBPF26B4DH59 902 aa20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 MAP1SQ66K74 1059 aaPredicted RBP20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 NBPF10Q6P3W6 841 aaKnown RBP20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 NBPF15Q8N660 670 aa20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 PSMD1Q99460 953 aa20.91■□□□□ 0.94
HLA-DPB1-210ENST00000416804 HSPA8P11142 646 aaKnown RBP20.9■□□□□ 0.94
HLA-DPB1-210ENST00000416804 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
HLA-DPB1-210ENST00000416804 CC2D2BQ6DHV5 1058 aa20.9■□□□□ 0.94
HLA-DPB1-210ENST00000416804 WDR33Q9C0J8 1336 aaKnown RBP20.9■□□□□ 0.94
HLA-DPB1-210ENST00000416804 FAM177BA6PVY3 158 aa20.89■□□□□ 0.93
HLA-DPB1-210ENST00000416804 ABT1Q9ULW3 272 aaKnown RBP20.89■□□□□ 0.93
HLA-DPB1-210ENST00000416804 NUDCQ9Y266 331 aa20.89■□□□□ 0.93
HLA-DPB1-210ENST00000416804 SNED1Q8TER0 1413 aa20.89■□□□□ 0.93
HLA-DPB1-210ENST00000416804 EIF6P56537 245 aaKnown RBP20.88■□□□□ 0.93
HLA-DPB1-210ENST00000416804 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
HLA-DPB1-210ENST00000416804 CCER1Q8TC90 406 aaPredicted RBP20.88■□□□□ 0.93
HLA-DPB1-210ENST00000416804 LMOD1P29536 600 aaPredicted RBP20.87■□□□□ 0.93
HLA-DPB1-210ENST00000416804 CRY2Q49AN0 593 aa20.87■□□□□ 0.93
HLA-DPB1-210ENST00000416804 MCM10Q7L590 875 aa20.87■□□□□ 0.93
HLA-DPB1-210ENST00000416804 NYXQ9GZU5 481 aa20.87■□□□□ 0.93
HLA-DPB1-210ENST00000416804 DDX21Q9NR30 783 aaKnown RBP eCLIP20.87■□□□□ 0.93
HLA-DPB1-210ENST00000416804 HLFQ16534 295 aa20.86■□□□□ 0.93
HLA-DPB1-210ENST00000416804 GRIPAP1Q4V328 841 aa20.86■□□□□ 0.93
HLA-DPB1-210ENST00000416804 ABHD8Q96I13 439 aa20.86■□□□□ 0.93
HLA-DPB1-210ENST00000416804 HTATSF1O43719 755 aaKnown RBP20.85■□□□□ 0.93
HLA-DPB1-210ENST00000416804 GJA3Q9Y6H8 435 aa20.85■□□□□ 0.93
HLA-DPB1-210ENST00000416804 ECE1P42892 770 aa20.85■□□□□ 0.93
HLA-DPB1-210ENST00000416804 ABCC12Q96J65 1359 aa20.84■□□□□ 0.93
HLA-DPB1-210ENST00000416804 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms