RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SRGNP10124 158 aa19.14■□□□□ 0.65
PAF1-202ENST00000416728 VEGFAP15692 232 aaPredicted RBP19.14■□□□□ 0.65
PAF1-202ENST00000416728 NBPF10Q6P3W6 841 aaKnown RBP19.14■□□□□ 0.65
PAF1-202ENST00000416728 NBPF15Q8N660 670 aa19.14■□□□□ 0.65
PAF1-202ENST00000416728 DNAJC5GQ8N7S2 189 aa19.14■□□□□ 0.65
PAF1-202ENST00000416728 SMC1BQ8NDV3 1235 aa19.14■□□□□ 0.65
PAF1-202ENST00000416728 RGL2O15211 777 aa19.13■□□□□ 0.65
PAF1-202ENST00000416728 PRPF40BQ6NWY9 871 aaKnown RBP19.13■□□□□ 0.65
PAF1-202ENST00000416728 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
PAF1-202ENST00000416728 MASTLQ96GX5 879 aa19.13■□□□□ 0.65
PAF1-202ENST00000416728 MIS18AQ9NYP9 233 aa19.13■□□□□ 0.65
PAF1-202ENST00000416728 BCORQ6W2J9 1755 aa19.13■□□□□ 0.65
PAF1-202ENST00000416728 COL11A2P13942 1736 aaPredicted RBP19.12■□□□□ 0.65
PAF1-202ENST00000416728 ERFEQ4G0M1 354 aa19.12■□□□□ 0.65
PAF1-202ENST00000416728 SOGA3Q5TF21 947 aa19.12■□□□□ 0.65
PAF1-202ENST00000416728 IFFO2Q5TF58 517 aa19.12■□□□□ 0.65
PAF1-202ENST00000416728 DPY19L2Q6NUT2 758 aa19.12■□□□□ 0.65
PAF1-202ENST00000416728 TAOK3Q9H2K8 898 aa19.12■□□□□ 0.65
PAF1-202ENST00000416728 NIP7Q9Y221 180 aaKnown RBP eCLIP19.12■□□□□ 0.65
PAF1-202ENST00000416728 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
PAF1-202ENST00000416728 TPTE2Q6XPS3 522 aa19.11■□□□□ 0.65
PAF1-202ENST00000416728 HTRA3P83110 453 aa19.1■□□□□ 0.65
PAF1-202ENST00000416728 PLEKHF1Q96S99 279 aa19.1■□□□□ 0.65
PAF1-202ENST00000416728 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
PAF1-202ENST00000416728 NFE2L2Q16236 605 aa19.09■□□□□ 0.65
PAF1-202ENST00000416728 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
PAF1-202ENST00000416728 TIAM2Q8IVF5 1701 aa19.09■□□□□ 0.65
PAF1-202ENST00000416728 NPR1P16066 1061 aa19.08■□□□□ 0.65
PAF1-202ENST00000416728 WDR90Q96KV7 1748 aa19.08■□□□□ 0.65
PAF1-202ENST00000416728 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
PAF1-202ENST00000416728 HLFQ16534 295 aa19.07■□□□□ 0.64
PAF1-202ENST00000416728 KLRG1Q96E93 195 aa19.07■□□□□ 0.64
PAF1-202ENST00000416728 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
PAF1-202ENST00000416728 KLRG2A4D1S0 409 aaPredicted RBP19.06■□□□□ 0.64
PAF1-202ENST00000416728 GTF2E1P29083 439 aaPredicted RBP19.06■□□□□ 0.64
PAF1-202ENST00000416728 EIF4A1P60842 406 aaKnown RBP19.06■□□□□ 0.64
PAF1-202ENST00000416728 NGEFQ8N5V2 710 aa19.06■□□□□ 0.64
PAF1-202ENST00000416728 CCDC93Q567U6 631 aa19.06■□□□□ 0.64
PAF1-202ENST00000416728 POTECB2RU33 542 aa19.05■□□□□ 0.64
PAF1-202ENST00000416728 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
PAF1-202ENST00000416728 RRP7AQ9Y3A4 280 aaKnown RBP19.05■□□□□ 0.64
PAF1-202ENST00000416728 SLX4Q8IY92 1834 aa19.05■□□□□ 0.64
PAF1-202ENST00000416728 FER1L6Q2WGJ9 1857 aa19.04■□□□□ 0.64
PAF1-202ENST00000416728 ERVV-1B6SEH8 477 aa19.04■□□□□ 0.64
PAF1-202ENST00000416728 KIF6Q6ZMV9 814 aa19.04■□□□□ 0.64
PAF1-202ENST00000416728 MAP3K15Q6ZN16 1313 aa19.03■□□□□ 0.64
PAF1-202ENST00000416728 LAMB4A4D0S4 1761 aa19.03■□□□□ 0.64
PAF1-202ENST00000416728 MYL6BP14649 208 aa19.03■□□□□ 0.64
PAF1-202ENST00000416728 NYXQ9GZU5 481 aa19.03■□□□□ 0.64
PAF1-202ENST00000416728 DDNO94850 711 aaPredicted RBP19.02■□□□□ 0.64
PAF1-202ENST00000416728 ALDH1B1P30837 517 aa19.02■□□□□ 0.64
PAF1-202ENST00000416728 TTLL7Q6ZT98 887 aa19.02■□□□□ 0.64
PAF1-202ENST00000416728 JMYQ8N9B5 988 aa19.02■□□□□ 0.64
PAF1-202ENST00000416728 CCDC88AQ3V6T2 1871 aa19.02■□□□□ 0.63
PAF1-202ENST00000416728 KDM3BQ7LBC6 1761 aa19.02■□□□□ 0.63
PAF1-202ENST00000416728 ARFGEF2Q9Y6D5 1785 aa19.01■□□□□ 0.63
PAF1-202ENST00000416728 FKBP4Q02790 459 aaKnown RBP eCLIP19.01■□□□□ 0.63
PAF1-202ENST00000416728 RALBP1Q15311 655 aa19.01■□□□□ 0.63
PAF1-202ENST00000416728 RTKN2Q8IZC4 609 aa19.01■□□□□ 0.63
PAF1-202ENST00000416728 TSPYL4Q9UJ04 414 aa19.01■□□□□ 0.63
PAF1-202ENST00000416728 NUTM1Q86Y26 1132 aa19■□□□□ 0.63
PAF1-202ENST00000416728 ZBTB3Q9H5J0 574 aa19■□□□□ 0.63
PAF1-202ENST00000416728 ERBB4Q15303 1308 aa19■□□□□ 0.63
PAF1-202ENST00000416728 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
PAF1-202ENST00000416728 ABCC12Q96J65 1359 aa18.99■□□□□ 0.63
PAF1-202ENST00000416728 GPTP24298 496 aa18.99■□□□□ 0.63
PAF1-202ENST00000416728 RIPK4P57078 832 aa18.99■□□□□ 0.63
PAF1-202ENST00000416728 OLFM4Q6UX06 510 aa18.99■□□□□ 0.63
PAF1-202ENST00000416728 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
PAF1-202ENST00000416728 CACNA1SQ13698 1873 aa18.99■□□□□ 0.63
PAF1-202ENST00000416728 IQCA1LA6NCM1 817 aa18.98■□□□□ 0.63
PAF1-202ENST00000416728 CRY2Q49AN0 593 aa18.98■□□□□ 0.63
PAF1-202ENST00000416728 DICER1Q9UPY3 1922 aaKnown RBP18.98■□□□□ 0.63
PAF1-202ENST00000416728 IBTKQ9P2D0 1353 aaPredicted RBP18.98■□□□□ 0.63
PAF1-202ENST00000416728 LMOD3Q0VAK6 560 aa18.97■□□□□ 0.63
PAF1-202ENST00000416728 CHADLQ6NUI6 762 aa18.97■□□□□ 0.63
PAF1-202ENST00000416728 UBN2Q6ZU65 1347 aa18.97■□□□□ 0.63
PAF1-202ENST00000416728 RPGRQ92834 1020 aaKnown RBP18.96■□□□□ 0.63
PAF1-202ENST00000416728 L3MBTL3Q96JM7 780 aaPredicted RBP18.96■□□□□ 0.63
PAF1-202ENST00000416728 EIF2S2P20042 333 aaKnown RBP18.95■□□□□ 0.62
PAF1-202ENST00000416728 TMPOP42166 694 aaKnown RBP18.95■□□□□ 0.62
PAF1-202ENST00000416728 SUSD4Q5VX71 490 aa18.95■□□□□ 0.62
PAF1-202ENST00000416728 GIGYF2Q6Y7W6 1299 aaKnown RBP18.95■□□□□ 0.62
PAF1-202ENST00000416728 ZNF34Q8IZ26 560 aa18.95■□□□□ 0.62
PAF1-202ENST00000416728 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
PAF1-202ENST00000416728 RIC1Q4ADV7 1423 aa18.95■□□□□ 0.62
PAF1-202ENST00000416728 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
PAF1-202ENST00000416728 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
PAF1-202ENST00000416728 IARSP41252 1262 aaKnown RBP18.94■□□□□ 0.62
PAF1-202ENST00000416728 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
PAF1-202ENST00000416728 SYNE4Q8N205 404 aa18.94■□□□□ 0.62
PAF1-202ENST00000416728 ZNF541Q9H0D2 1346 aa18.94■□□□□ 0.62
PAF1-202ENST00000416728 HOXA10P31260 410 aaPredicted RBP18.93■□□□□ 0.62
PAF1-202ENST00000416728 PARP10Q53GL7 1025 aa18.93■□□□□ 0.62
PAF1-202ENST00000416728 PPP1R42Q7Z4L9 355 aa18.93■□□□□ 0.62
PAF1-202ENST00000416728 PSMD1Q99460 953 aa18.93■□□□□ 0.62
PAF1-202ENST00000416728 TAF1DQ9H5J8 278 aaPredicted RBP18.93■□□□□ 0.62
PAF1-202ENST00000416728 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
PAF1-202ENST00000416728 NTSR2O95665 410 aa18.93■□□□□ 0.62
PAF1-202ENST00000416728 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms