RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 ATP10BO94823 1461 aa12.38□□□□□ -0.43
COL12A1-203ENST00000416123 SEPT7Q16181 437 aaKnown RBP12.38□□□□□ -0.43
COL12A1-203ENST00000416123 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
COL12A1-203ENST00000416123 TMEM67Q5HYA8 995 aa12.38□□□□□ -0.43
COL12A1-203ENST00000416123 ERCC4Q92889 916 aaPredicted RBP12.38□□□□□ -0.43
COL12A1-203ENST00000416123 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 ERLIN2O94905 339 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 SETDB2Q96T68 719 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 TMX1Q9H3N1 280 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 TSPY2A6NKD2 308 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 HSPA2P54652 639 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 EVI5LQ96CN4 794 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 A2MP01023 1474 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 PIK3R4Q99570 1358 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 MICU3Q86XE3 530 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 GDPD2Q9HCC8 539 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
COL12A1-203ENST00000416123 MAP7D2Q96T17 732 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 ABCC1P33527 1531 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 MCM4P33991 863 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 NEBLO76041 1014 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 TBC1D9Q6ZT07 1266 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 UGGT2Q9NYU1 1516 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 CCDC152Q4G0S7 254 aa12.36□□□□□ -0.43
COL12A1-203ENST00000416123 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
COL12A1-203ENST00000416123 COPS6Q7L5N1 327 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 TEX13AQ9BXU3 409 aaPredicted RBP12.35□□□□□ -0.43
COL12A1-203ENST00000416123 PANK2Q9BZ23 570 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
COL12A1-203ENST00000416123 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 PICALMQ13492 652 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 ZNF397Q8NF99 534 aaPredicted RBP12.35□□□□□ -0.43
COL12A1-203ENST00000416123 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 MFSD6Q6ZSS7 791 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 MAP3K1Q13233 1512 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 IGHDP01880 384 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 PPP4R3AQ6IN85 833 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 GJB2P29033 226 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 DNA2P51530 1060 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 TAX1BP1Q86VP1 789 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 KAT14Q9H8E8 782 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
COL12A1-203ENST00000416123 GOLGA6L10A6NI86 522 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 TTF1Q15361 905 aaPredicted RBP12.34□□□□□ -0.43
COL12A1-203ENST00000416123 JAG2Q9Y219 1238 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 CFAP43Q8NDM7 1665 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
COL12A1-203ENST00000416123 MEIS3Q99687 375 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 SLC26A6Q9BXS9 759 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
COL12A1-203ENST00000416123 NIP7Q9Y221 180 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL12A1-203ENST00000416123 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 BAG3O95817 575 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 H0YHG0 523 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 BIN1O00499 593 aa12.34□□□□□ -0.43
COL12A1-203ENST00000416123 WDR7Q9Y4E6 1490 aa12.33□□□□□ -0.43
COL12A1-203ENST00000416123 CCDC194A0A1B0GVG4 234 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 NSD2O96028 1365 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 EIF2AK4Q9P2K8 1649 aaKnown RBP12.33□□□□□ -0.44
COL12A1-203ENST00000416123 ANKRD36BQ8N2N9 1353 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 SSFA2P28290 1259 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 SIRT1Q96EB6 747 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 TSG101Q99816 390 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 PPP1R12BO60237 982 aaPredicted RBP12.33□□□□□ -0.44
COL12A1-203ENST00000416123 TOM1O60784 492 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 TNNT1P13805 278 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
COL12A1-203ENST00000416123 TMEM266Q2M3C6 531 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 TAF3Q5VWG9 929 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 PDE4BQ07343 736 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 STX8Q9UNK0 236 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 USP16Q9Y5T5 823 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 ZNF518AQ6AHZ1 1483 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 DDB1Q16531 1140 aa12.33□□□□□ -0.44
COL12A1-203ENST00000416123 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 CACNA2D4Q7Z3S7 1137 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 EIF4A2Q14240 407 aaKnown RBP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 NPHP3Q7Z494 1330 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 CPLX3Q8WVH0 158 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 CYP7A1P22680 504 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 MYO1BO43795 1136 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 C8orf58Q8NAV2 365 aa12.32□□□□□ -0.44
COL12A1-203ENST00000416123 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms