RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 ANKRD13DQ6ZTN6 518 aa14.32□□□□□ -0.12
RFFL-205ENST00000415395 DCTPP1Q9H773 170 aa14.32□□□□□ -0.12
RFFL-205ENST00000415395 PLBD2Q8NHP8 589 aa14.31□□□□□ -0.12
RFFL-205ENST00000415395 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
RFFL-205ENST00000415395 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
RFFL-205ENST00000415395 TRPC5Q9UL62 973 aaPredicted RBP14.31□□□□□ -0.12
RFFL-205ENST00000415395 UTYO14607 1347 aa14.3□□□□□ -0.12
RFFL-205ENST00000415395 EIF5BO60841 1220 aaKnown RBP14.3□□□□□ -0.12
RFFL-205ENST00000415395 AIMP1Q12904 312 aaKnown RBP14.3□□□□□ -0.12
RFFL-205ENST00000415395 SYTL4Q96C24 671 aaPredicted RBP14.3□□□□□ -0.12
RFFL-205ENST00000415395 NHSQ6T4R5 1651 aa14.3□□□□□ -0.12
RFFL-205ENST00000415395 NBPF26B4DH59 902 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 ONECUT3O60422 494 aaPredicted RBP14.29□□□□□ -0.12
RFFL-205ENST00000415395 NBPF14Q5TI25 921 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 NBPF10Q6P3W6 841 aaKnown RBP14.29□□□□□ -0.12
RFFL-205ENST00000415395 CHD1LQ86WJ1 897 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 NBPF15Q8N660 670 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 SMARCC1Q92922 1105 aaPredicted RBP14.29□□□□□ -0.12
RFFL-205ENST00000415395 RREB1Q92766 1687 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 RBM42Q9BTD8 480 aaKnown RBP14.29□□□□□ -0.12
RFFL-205ENST00000415395 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
RFFL-205ENST00000415395 SEC24BO95487 1268 aa14.28□□□□□ -0.12
RFFL-205ENST00000415395 DNAJC10Q8IXB1 793 aa14.28□□□□□ -0.12
RFFL-205ENST00000415395 LRRFIP2Q9Y608 721 aaKnown RBP14.28□□□□□ -0.12
RFFL-205ENST00000415395 A1BGP04217 495 aa14.27□□□□□ -0.12
RFFL-205ENST00000415395 C9orf78Q9NZ63 289 aaPredicted RBP14.27□□□□□ -0.12
RFFL-205ENST00000415395 COL15A1P39059 1388 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 GRM8O00222 908 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 IGKV5-2P06315 115 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 MTX1Q13505 466 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 SLKQ9H2G2 1235 aaPredicted RBP14.27□□□□□ -0.13
RFFL-205ENST00000415395 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
RFFL-205ENST00000415395 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
RFFL-205ENST00000415395 COL5A3P25940 1745 aaPredicted RBP14.26□□□□□ -0.13
RFFL-205ENST00000415395 SBF2Q86WG5 1849 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 NBPF7P0C2Y1 421 aaPredicted RBP14.26□□□□□ -0.13
RFFL-205ENST00000415395 CYP19A1P11511 503 aaPredicted RBP14.26□□□□□ -0.13
RFFL-205ENST00000415395 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 SSH3Q8TE77 659 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 SLC4A9Q96Q91 983 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 TBC1D2Q9BYX2 928 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 CHMP5Q9NZZ3 219 aa14.26□□□□□ -0.13
RFFL-205ENST00000415395 BTAF1O14981 1849 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 A0A0G2JS52 829 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 PIP4K2AP48426 406 aaPredicted RBP14.25□□□□□ -0.13
RFFL-205ENST00000415395 GCKRQ14397 625 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
RFFL-205ENST00000415395 HSCBQ8IWL3 235 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 MYD88Q99836 296 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
RFFL-205ENST00000415395 ANKRD36CQ5JPF3 1778 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 PTMSP20962 102 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 POLA2Q14181 598 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 LOC102724428A0A0B4J2F2 783 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 SIK1P57059 783 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 LNPKQ9C0E8 428 aa14.24□□□□□ -0.13
RFFL-205ENST00000415395 PNMA6EA0A0J9YXQ4 647 aa14.23□□□□□ -0.13
RFFL-205ENST00000415395 IL6STP40189 918 aaPredicted RBP14.23□□□□□ -0.13
RFFL-205ENST00000415395 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
RFFL-205ENST00000415395 DDX11L8A8MPP1 907 aa14.22□□□□□ -0.13
RFFL-205ENST00000415395 PPP1R42Q7Z4L9 355 aa14.22□□□□□ -0.13
RFFL-205ENST00000415395 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
RFFL-205ENST00000415395 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
RFFL-205ENST00000415395 ISY1Q9ULR0 285 aaKnown RBP14.22□□□□□ -0.13
RFFL-205ENST00000415395 LY75O60449 1722 aa14.22□□□□□ -0.13
RFFL-205ENST00000415395 RAB11FIP3O75154 756 aa14.21□□□□□ -0.13
RFFL-205ENST00000415395 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.13
RFFL-205ENST00000415395 HSP90AB4PQ58FF6 505 aa14.21□□□□□ -0.13
RFFL-205ENST00000415395 NUP98P52948 1817 aa14.21□□□□□ -0.13
RFFL-205ENST00000415395 MAP3K15Q6ZN16 1313 aa14.21□□□□□ -0.13
RFFL-205ENST00000415395 SRGAP3O43295 1099 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 KCNQ2O43526 872 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 ATP6V1AP38606 617 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.14
RFFL-205ENST00000415395 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.14
RFFL-205ENST00000415395 CWC25Q9NXE8 425 aaPredicted RBP14.21□□□□□ -0.14
RFFL-205ENST00000415395 GOLGA6L3A6NEY3 463 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 MCM4P33991 863 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 TCIRG1Q13488 830 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 SUCLG2Q96I99 432 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 ISCA1Q9BUE6 129 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
RFFL-205ENST00000415395 MYH14Q7Z406 1995 aaKnown RBP14.2□□□□□ -0.14
RFFL-205ENST00000415395 ZNF772Q68DY9 489 aaPredicted RBP14.19□□□□□ -0.14
RFFL-205ENST00000415395 GIGYF2Q6Y7W6 1299 aaKnown RBP14.19□□□□□ -0.14
RFFL-205ENST00000415395 LRRCC1Q9C099 1032 aa14.19□□□□□ -0.14
RFFL-205ENST00000415395 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
RFFL-205ENST00000415395 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
RFFL-205ENST00000415395 BRWD3Q6RI45 1802 aa14.19□□□□□ -0.14
RFFL-205ENST00000415395 A0A087WZG4 1122 aa14.18□□□□□ -0.14
RFFL-205ENST00000415395 H7C1W4 665 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms