RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SLFN5Q08AF3 891 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 TNPO1Q92973 898 aaKnown RBP24.65■■□□□ 1.54
AP1S3-205ENST00000415298 ZNF445P59923 1031 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 MPRIPQ6WCQ1 1025 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 IL17REQ8NFR9 667 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 LGR6Q9HBX8 967 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 RSPH14Q9UHP6 348 aa24.65■■□□□ 1.54
AP1S3-205ENST00000415298 SPATA31A5Q5VU36 1347 aa24.64■■□□□ 1.54
AP1S3-205ENST00000415298 SPATA31A7Q8IWB4 1347 aa24.64■■□□□ 1.54
AP1S3-205ENST00000415298 WDR63Q8IWG1 891 aa24.64■■□□□ 1.54
AP1S3-205ENST00000415298 CYP27B1O15528 508 aa24.64■■□□□ 1.53
AP1S3-205ENST00000415298 FAM177BA6PVY3 158 aa24.63■■□□□ 1.53
AP1S3-205ENST00000415298 RTF1Q92541 710 aaKnown RBP24.63■■□□□ 1.53
AP1S3-205ENST00000415298 DUSP27Q5VZP5 1158 aa24.62■■□□□ 1.53
AP1S3-205ENST00000415298 OVOS2A0A0G2JMS6 1433 aa24.62■■□□□ 1.53
AP1S3-205ENST00000415298 DDIT3P35638 169 aa24.62■■□□□ 1.53
AP1S3-205ENST00000415298 ZCRB1Q8TBF4 217 aaKnown RBP24.62■■□□□ 1.53
AP1S3-205ENST00000415298 TSR2Q969E8 191 aaKnown RBP24.62■■□□□ 1.53
AP1S3-205ENST00000415298 SPG7Q9UQ90 795 aa24.62■■□□□ 1.53
AP1S3-205ENST00000415298 MAP3K5Q99683 1374 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 DHX16O60231 1041 aaKnown RBP24.61■■□□□ 1.53
AP1S3-205ENST00000415298 DDX54Q8TDD1 881 aaKnown RBP24.61■■□□□ 1.53
AP1S3-205ENST00000415298 VPS72Q15906 364 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 AKAP4Q5JQC9 854 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 ICE2Q659A1 982 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 CREBRFQ8IUR6 639 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 BRMS1Q9HCU9 246 aa24.61■■□□□ 1.53
AP1S3-205ENST00000415298 C1orf141Q5JVX7 400 aa24.6■■□□□ 1.53
AP1S3-205ENST00000415298 MIS18AQ9NYP9 233 aa24.6■■□□□ 1.53
AP1S3-205ENST00000415298 TAOK2Q9UL54 1235 aa24.6■■□□□ 1.53
AP1S3-205ENST00000415298 KLHL40Q2TBA0 621 aa24.6■■□□□ 1.53
AP1S3-205ENST00000415298 TRMT2AQ8IZ69 625 aaKnown RBP24.6■■□□□ 1.53
AP1S3-205ENST00000415298 CIZ1Q9ULV3 898 aaPredicted RBP24.6■■□□□ 1.53
AP1S3-205ENST00000415298 PHKG2P15735 406 aa24.59■■□□□ 1.53
AP1S3-205ENST00000415298 FAM98CQ17RN3 349 aaKnown RBP24.59■■□□□ 1.53
AP1S3-205ENST00000415298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.59■■□□□ 1.53
AP1S3-205ENST00000415298 IRF6O14896 467 aa24.58■■□□□ 1.53
AP1S3-205ENST00000415298 TRERF1Q96PN7 1200 aa24.58■■□□□ 1.52
AP1S3-205ENST00000415298 DISP2A7MBM2 1401 aa24.57■■□□□ 1.52
AP1S3-205ENST00000415298 DDX41Q9UJV9 622 aaKnown RBP24.57■■□□□ 1.52
AP1S3-205ENST00000415298 MORC2Q9Y6X9 1032 aaPredicted RBP24.57■■□□□ 1.52
AP1S3-205ENST00000415298 ERICH4A6NGS2 130 aa24.57■■□□□ 1.52
AP1S3-205ENST00000415298 IFNL2Q8IZJ0 200 aa24.57■■□□□ 1.52
AP1S3-205ENST00000415298 ZNF592Q92610 1267 aa24.56■■□□□ 1.52
AP1S3-205ENST00000415298 RBSNQ9H1K0 784 aa24.56■■□□□ 1.52
AP1S3-205ENST00000415298 CTNNA3Q9UI47 895 aa24.56■■□□□ 1.52
AP1S3-205ENST00000415298 SH3BP1Q9Y3L3 701 aa24.56■■□□□ 1.52
AP1S3-205ENST00000415298 PARP4Q9UKK3 1724 aaKnown RBP24.55■■□□□ 1.52
AP1S3-205ENST00000415298 HTATSF1O43719 755 aaKnown RBP24.55■■□□□ 1.52
AP1S3-205ENST00000415298 RASSF4Q9H2L5 321 aa24.55■■□□□ 1.52
AP1S3-205ENST00000415298 THRAP3Q9Y2W1 955 aaKnown RBP24.55■■□□□ 1.52
AP1S3-205ENST00000415298 PKD1L3Q7Z443 1732 aa24.55■■□□□ 1.52
AP1S3-205ENST00000415298 GUCY2CP25092 1073 aa24.55■■□□□ 1.52
AP1S3-205ENST00000415298 RAD51AP2Q09MP3 1159 aa24.55■■□□□ 1.52
AP1S3-205ENST00000415298 RAB3GAP1Q15042 981 aa24.55■■□□□ 1.52
AP1S3-205ENST00000415298 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
AP1S3-205ENST00000415298 QTRT2Q9H974 415 aaKnown RBP24.54■■□□□ 1.52
AP1S3-205ENST00000415298 PIBF1Q8WXW3 757 aa24.54■■□□□ 1.52
AP1S3-205ENST00000415298 GJD4Q96KN9 370 aaPredicted RBP24.54■■□□□ 1.52
AP1S3-205ENST00000415298 EXOC5O00471 708 aa24.53■■□□□ 1.52
AP1S3-205ENST00000415298 ZNF853P0CG23 659 aa24.53■■□□□ 1.52
AP1S3-205ENST00000415298 MBIPQ9NS73 344 aa24.53■■□□□ 1.52
AP1S3-205ENST00000415298 GOLIM4O00461 696 aa24.53■■□□□ 1.52
AP1S3-205ENST00000415298 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
AP1S3-205ENST00000415298 SHANK3Q9BYB0 1731 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 GOLGA6L22H0YM25 854 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 CFAP44Q96MT7 982 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 IL16Q14005 1332 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 PCDH11XQ9BZA7 1347 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 PCDH11YQ9BZA8 1340 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 CEMIPQ8WUJ3 1361 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 CTIFO43310 598 aaKnown RBP24.52■■□□□ 1.52
AP1S3-205ENST00000415298 NOLC1Q14978 699 aaKnown RBP eCLIP24.52■■□□□ 1.52
AP1S3-205ENST00000415298 HSCBQ8IWL3 235 aa24.52■■□□□ 1.52
AP1S3-205ENST00000415298 DDX49Q9Y6V7 483 aaKnown RBP24.51■■□□□ 1.51
AP1S3-205ENST00000415298 KDM6AO15550 1401 aaPredicted RBP24.51■■□□□ 1.51
AP1S3-205ENST00000415298 KIF16BQ96L93 1317 aa24.51■■□□□ 1.51
AP1S3-205ENST00000415298 MAP2K1Q02750 393 aaPredicted RBP24.51■■□□□ 1.51
AP1S3-205ENST00000415298 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
AP1S3-205ENST00000415298 RAI14Q9P0K7 980 aa24.51■■□□□ 1.51
AP1S3-205ENST00000415298 TRPC5Q9UL62 973 aaPredicted RBP24.51■■□□□ 1.51
AP1S3-205ENST00000415298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.51■■□□□ 1.51
AP1S3-205ENST00000415298 A0A0G2JS52 829 aa24.5■■□□□ 1.51
AP1S3-205ENST00000415298 DDB1Q16531 1140 aa24.5■■□□□ 1.51
AP1S3-205ENST00000415298 DIAPH3Q9NSV4 1193 aa24.5■■□□□ 1.51
AP1S3-205ENST00000415298 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.5■■□□□ 1.51
AP1S3-205ENST00000415298 GNAI1P63096 354 aa24.5■■□□□ 1.51
AP1S3-205ENST00000415298 HNRNPH2P55795 449 aaKnown RBP24.49■■□□□ 1.51
AP1S3-205ENST00000415298 EXOSC9Q06265 439 aaKnown RBP24.49■■□□□ 1.51
AP1S3-205ENST00000415298 DONSONQ9NYP3 566 aa24.49■■□□□ 1.51
AP1S3-205ENST00000415298 CHL1O00533 1208 aa24.49■■□□□ 1.51
AP1S3-205ENST00000415298 SEMA3FQ13275 785 aa24.49■■□□□ 1.51
AP1S3-205ENST00000415298 FKBP5Q13451 457 aaPredicted RBP24.49■■□□□ 1.51
AP1S3-205ENST00000415298 KRT24Q2M2I5 525 aa24.49■■□□□ 1.51
AP1S3-205ENST00000415298 WNK3Q9BYP7 1800 aa24.48■■□□□ 1.51
AP1S3-205ENST00000415298 GLI3P10071 1580 aa24.48■■□□□ 1.51
AP1S3-205ENST00000415298 ELL2O00472 640 aaPredicted RBP24.48■■□□□ 1.51
AP1S3-205ENST00000415298 TEFQ10587 303 aa24.48■■□□□ 1.51
AP1S3-205ENST00000415298 NFATC2IPQ8NCF5 419 aa24.48■■□□□ 1.51
AP1S3-205ENST00000415298 DCAF5Q96JK2 942 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms