RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 APBA3O96018 575 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 YBX3P16989 372 aaKnown RBP eCLIP5.03□□□□□ -1.6
SF3B1-203ENST00000414174 MCCP23508 829 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 CANXP27824 592 aaKnown RBP5.03□□□□□ -1.6
SF3B1-203ENST00000414174 PHKA2P46019 1235 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 PRRT3Q5FWE3 981 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 CNKSR1Q969H4 720 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 ZSCAN10Q96SZ4 725 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-203ENST00000414174 ARHGEF10LQ9HCE6 1279 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 PCDHGC4Q9Y5F7 938 aa5.03□□□□□ -1.6
SF3B1-203ENST00000414174 COBLO75128 1261 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 STAU1O95793 577 aaKnown RBP5.02□□□□□ -1.61
SF3B1-203ENST00000414174 MCCD1P59942 119 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-203ENST00000414174 VAC14Q08AM6 782 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 GNASQ5JWF2 1037 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 MCTP1Q6DN14 999 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 FCHSD1Q86WN1 690 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 XAGE2Q96GT9 111 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 NACC1Q96RE7 527 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 CHIC2Q9UKJ5 165 aa5.02□□□□□ -1.61
SF3B1-203ENST00000414174 COL17A1Q9UMD9 1497 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-203ENST00000414174 PAX4O43316 350 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 IL2RAP01589 272 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 GTF2E1P29083 439 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-203ENST00000414174 GLIPR1L2Q4G1C9 344 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 C4orf17Q53FE4 359 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 NLRP8Q86W28 1048 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 FMNL2Q96PY5 1086 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 ZCCHC2Q9C0B9 1178 aaKnown RBP5.01□□□□□ -1.61
SF3B1-203ENST00000414174 ESF1Q9H501 851 aaKnown RBP5.01□□□□□ -1.61
SF3B1-203ENST00000414174 RAB6BQ9NRW1 208 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 COG6Q9Y2V7 657 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 CADPSQ9ULU8 1353 aa5.01□□□□□ -1.61
SF3B1-203ENST00000414174 ABL2P42684 1182 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 ANAPC15P60006 121 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 AEBP1Q8IUX7 1158 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 CNPY4Q8N129 248 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 POM121Q96HA1 1249 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
SF3B1-203ENST00000414174 FHDC1Q9C0D6 1143 aaPredicted RBP5□□□□□ -1.61
SF3B1-203ENST00000414174 PRDM10Q9NQV6 1147 aa5□□□□□ -1.61
SF3B1-203ENST00000414174 DNAAF2Q9NVR5 837 aaKnown RBP5□□□□□ -1.61
SF3B1-203ENST00000414174 TMEM214Q6NUQ4 689 aaKnown RBP4.99□□□□□ -1.61
SF3B1-203ENST00000414174 EXOC8Q8IYI6 725 aa4.99□□□□□ -1.61
SF3B1-203ENST00000414174 CCDC82Q8N4S0 544 aa4.99□□□□□ -1.61
SF3B1-203ENST00000414174 C1orf216Q8TAB5 229 aa4.99□□□□□ -1.61
SF3B1-203ENST00000414174 GZF1Q9H116 711 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-203ENST00000414174 PRDM6Q9NQX0 595 aa4.99□□□□□ -1.61
SF3B1-203ENST00000414174 ZNF330Q9Y3S2 320 aaPredicted RBP4.99□□□□□ -1.61
SF3B1-203ENST00000414174 PIK3CDO00329 1044 aa4.98□□□□□ -1.61
SF3B1-203ENST00000414174 ATXN7O15265 892 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-203ENST00000414174 NEFMP07197 916 aa4.98□□□□□ -1.61
SF3B1-203ENST00000414174 ALAS2P22557 587 aa4.98□□□□□ -1.61
SF3B1-203ENST00000414174 TNP2Q05952 138 aa4.98□□□□□ -1.61
SF3B1-203ENST00000414174 TRIM28Q13263 835 aaKnown RBP4.98□□□□□ -1.61
SF3B1-203ENST00000414174 HSP90AB4PQ58FF6 505 aa4.98□□□□□ -1.61
SF3B1-203ENST00000414174 ZNF468Q5VIY5 522 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-203ENST00000414174 ZNF526Q8TF50 670 aaPredicted RBP4.98□□□□□ -1.61
SF3B1-203ENST00000414174 ELOA3CA0A087WX78 387 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 PLEKHD1A6NEE1 506 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 ELOA3DA6NLF2 546 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 C9orf172C9J069 976 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 MAPTP10636 758 aaKnown RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 ELNP15502 786 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 SCNN1DP51172 638 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 EIF4G2P78344 907 aaKnown RBP eCLIP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 COL9A3Q14050 684 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 ELOA3BQ3SY89 546 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 PPARGC1BQ86YN6 1023 aaKnown RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 GPATCH11Q8N954 259 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 ELOA3Q8NG57 546 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 RHBDD1Q8TEB9 315 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 IPO4Q8TEX9 1081 aaKnown RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 MDFIQ99750 246 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 ETNK1Q9HBU6 452 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 NAP1L2Q9ULW6 460 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-203ENST00000414174 DOLKQ9UPQ8 538 aa4.97□□□□□ -1.61
SF3B1-203ENST00000414174 PTMAP06454 111 aaKnown RBP4.96□□□□□ -1.62
SF3B1-203ENST00000414174 ESCO1Q5FWF5 840 aa4.96□□□□□ -1.62
SF3B1-203ENST00000414174 ADAMTS19Q8TE59 1207 aa4.96□□□□□ -1.62
SF3B1-203ENST00000414174 HCN2Q9UL51 889 aa4.96□□□□□ -1.62
SF3B1-203ENST00000414174 AMOTL2Q9Y2J4 779 aa4.96□□□□□ -1.62
SF3B1-203ENST00000414174 LOC102724159A0A0B4J2E5 919 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 ADGRE1Q14246 886 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 PWP2Q15269 919 aaKnown RBP4.95□□□□□ -1.62
SF3B1-203ENST00000414174 OXLD1Q5BKU9 147 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 TBC1D9Q6ZT07 1266 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 ZNF295-AS1Q8N0V1 137 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 PRR12Q9ULL5 1215 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 RNF112Q9ULX5 631 aa4.95□□□□□ -1.62
SF3B1-203ENST00000414174 POM121CA8CG34 1229 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 ADARB2-AS1A8MUL3 147 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 MYCP01106 439 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-203ENST00000414174 CD33P20138 364 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 PCBP4P57723 403 aaKnown RBP4.94□□□□□ -1.62
SF3B1-203ENST00000414174 FZD5Q13467 585 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 WASHC4Q2M389 1173 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 SLFNL1Q499Z3 407 aa4.94□□□□□ -1.62
SF3B1-203ENST00000414174 PLPP7Q8NBV4 271 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms