RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 SF3A1Q15459 793 aaKnown RBP16.39■□□□□ 0.21
LINC00887-202ENST00000414120 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
LINC00887-202ENST00000414120 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
LINC00887-202ENST00000414120 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
LINC00887-202ENST00000414120 AMOTQ4VCS5 1084 aa16.38■□□□□ 0.21
LINC00887-202ENST00000414120 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
LINC00887-202ENST00000414120 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
LINC00887-202ENST00000414120 PIK3C2GO75747 1445 aa16.38■□□□□ 0.21
LINC00887-202ENST00000414120 PHF8Q9UPP1 1060 aa16.38■□□□□ 0.21
LINC00887-202ENST00000414120 PPLO60437 1756 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 RPS6KA5O75582 802 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 E2F4Q16254 413 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 TTLL5Q6EMB2 1281 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
LINC00887-202ENST00000414120 MYOM2P54296 1465 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 ATP8B1O43520 1251 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 CEP126Q9P2H0 1117 aa16.37■□□□□ 0.21
LINC00887-202ENST00000414120 KDM4AO75164 1064 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 FAM163BP0C2L3 166 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 GRIK3Q13003 919 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
LINC00887-202ENST00000414120 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 MMTAG2Q9BU76 263 aaKnown RBP16.36■□□□□ 0.21
LINC00887-202ENST00000414120 DMRT2Q9Y5R5 561 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 PTPRCP08575 1304 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 TEX11Q8IYF3 940 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 AK7Q96M32 723 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 TMCO5BA8MYB1 307 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 KCNA6P17658 529 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 PIK3R5Q8WYR1 880 aa16.36■□□□□ 0.21
LINC00887-202ENST00000414120 TRIM74Q86UV6 250 aa16.35■□□□□ 0.21
LINC00887-202ENST00000414120 TRIM73Q86UV7 250 aa16.35■□□□□ 0.21
LINC00887-202ENST00000414120 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
LINC00887-202ENST00000414120 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
LINC00887-202ENST00000414120 CORO7P57737 925 aa16.35■□□□□ 0.21
LINC00887-202ENST00000414120 CPSF2Q9P2I0 782 aaKnown RBP16.35■□□□□ 0.21
LINC00887-202ENST00000414120 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
LINC00887-202ENST00000414120 BAG4O95429 457 aaKnown RBP16.34■□□□□ 0.21
LINC00887-202ENST00000414120 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
LINC00887-202ENST00000414120 MAF1Q9H063 256 aa16.34■□□□□ 0.21
LINC00887-202ENST00000414120 CHCHD3Q9NX63 227 aaKnown RBP16.34■□□□□ 0.21
LINC00887-202ENST00000414120 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
LINC00887-202ENST00000414120 ZSCAN16Q9H4T2 348 aaPredicted RBP16.33■□□□□ 0.21
LINC00887-202ENST00000414120 PCDHGA4Q9Y5G9 962 aa16.33■□□□□ 0.21
LINC00887-202ENST00000414120 CRYMQ14894 314 aa16.33■□□□□ 0.2
LINC00887-202ENST00000414120 NAIF1Q69YI7 327 aaPredicted RBP16.33■□□□□ 0.2
LINC00887-202ENST00000414120 DRAXINQ8NBI3 349 aaPredicted RBP16.33■□□□□ 0.2
LINC00887-202ENST00000414120 NEURL4Q96JN8 1562 aa16.33■□□□□ 0.2
LINC00887-202ENST00000414120 IMPDH2P12268 514 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 SNRNP27Q8WVK2 155 aaKnown RBP16.32■□□□□ 0.2
LINC00887-202ENST00000414120 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 GNL3LQ9NVN8 582 aaKnown RBP16.32■□□□□ 0.2
LINC00887-202ENST00000414120 ALKQ9UM73 1620 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 SKILP12757 684 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 RBBP5Q15291 538 aaKnown RBP16.32■□□□□ 0.2
LINC00887-202ENST00000414120 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 GIMAP7Q8NHV1 300 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 PRAM1Q96QH2 718 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 FAM107BQ9H098 131 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 SPATS2LQ9NUQ6 558 aaKnown RBP16.32■□□□□ 0.2
LINC00887-202ENST00000414120 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
LINC00887-202ENST00000414120 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 DNAAF4Q8WXU2 420 aa16.32■□□□□ 0.2
LINC00887-202ENST00000414120 IQGAP1P46940 1657 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 TTC19Q6DKK2 380 aaPredicted RBP16.31■□□□□ 0.2
LINC00887-202ENST00000414120 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 GCFC2P16383 781 aaKnown RBP16.31■□□□□ 0.2
LINC00887-202ENST00000414120 PRPHP41219 470 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
LINC00887-202ENST00000414120 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 UBXN6Q9BZV1 441 aa16.31■□□□□ 0.2
LINC00887-202ENST00000414120 NUTM2FA1L443 756 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 MYBL2P10244 700 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 RPS6KA3P51812 740 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 PDIA5Q14554 519 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 STRCQ7RTU9 1775 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 EIF3CLB5ME19 914 aaKnown RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 PLIN1O60240 522 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 TBC1D8BQ0IIM8 1120 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 DZIP3Q86Y13 1208 aaKnown RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 RBM12BQ8IXT5 1001 aaKnown RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 EIF3CQ99613 913 aaKnown RBP16.3■□□□□ 0.2
LINC00887-202ENST00000414120 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 SUN2Q9UH99 717 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 NRXN1Q9ULB1 1477 aa16.3■□□□□ 0.2
LINC00887-202ENST00000414120 CHMLP26374 656 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 ACTN2P35609 894 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 NEDD9Q14511 834 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 ERO1AQ96HE7 468 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 ZNF232Q9UNY5 417 aa16.29■□□□□ 0.2
LINC00887-202ENST00000414120 MINK1Q8N4C8 1332 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms