RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 NEURL1BA8MQ27 555 aa10.34□□□□□ -0.75
HDAC9-207ENST00000413509 KCNQ2O43526 872 aa10.34□□□□□ -0.75
HDAC9-207ENST00000413509 MTX1Q13505 466 aa10.34□□□□□ -0.75
HDAC9-207ENST00000413509 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
HDAC9-207ENST00000413509 QTRT2Q9H974 415 aaKnown RBP10.34□□□□□ -0.75
HDAC9-207ENST00000413509 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
HDAC9-207ENST00000413509 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 UBTFL1P0CB47 393 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 PIP4K2AP48426 406 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 SIK1P57059 783 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 ATP8B2P98198 1209 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 AIMP1Q12904 312 aaKnown RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 POLA2Q14181 598 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 TTLL7Q6ZT98 887 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 RIC3Q7Z5B4 369 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 SEPT12Q8IYM1 358 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 SYTL4Q96C24 671 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 ACSBG1Q96GR2 724 aa10.33□□□□□ -0.76
HDAC9-207ENST00000413509 RBM42Q9BTD8 480 aaKnown RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
HDAC9-207ENST00000413509 GRM8O00222 908 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 HMMRO75330 724 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 NBPF7P0C2Y1 421 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-207ENST00000413509 PDE4AP27815 886 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 CASP7P55210 303 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 TRIM28Q13263 835 aaKnown RBP10.32□□□□□ -0.76
HDAC9-207ENST00000413509 ITPK1Q13572 414 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 GCKRQ14397 625 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 CWF19L2Q2TBE0 894 aaKnown RBP10.32□□□□□ -0.76
HDAC9-207ENST00000413509 INTS5Q6P9B9 1019 aaKnown RBP10.32□□□□□ -0.76
HDAC9-207ENST00000413509 SSH3Q8TE77 659 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 TAF1LQ8IZX4 1826 aa10.32□□□□□ -0.76
HDAC9-207ENST00000413509 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
HDAC9-207ENST00000413509 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-207ENST00000413509 EIF5P55010 431 aaKnown RBP10.31□□□□□ -0.76
HDAC9-207ENST00000413509 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
HDAC9-207ENST00000413509 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-207ENST00000413509 KAZALD1Q96I82 304 aa10.31□□□□□ -0.76
HDAC9-207ENST00000413509 HDAC5Q9UQL6 1122 aa10.31□□□□□ -0.76
HDAC9-207ENST00000413509 NUP98P52948 1817 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 PNMA6EA0A0J9YXQ4 647 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 PTF1AQ7RTS3 328 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 CHD1LQ86WJ1 897 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 MYD88Q99836 296 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 ISCA1Q9BUE6 129 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 CCDC87Q9NVE4 849 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 ZBTB1Q9Y2K1 713 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 MAP3K15Q6ZN16 1313 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 CNTNAP4Q9C0A0 1308 aa10.3□□□□□ -0.76
HDAC9-207ENST00000413509 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
HDAC9-207ENST00000413509 H7C1W4 665 aa10.29□□□□□ -0.76
HDAC9-207ENST00000413509 RGL2O15211 777 aa10.29□□□□□ -0.76
HDAC9-207ENST00000413509 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
HDAC9-207ENST00000413509 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
HDAC9-207ENST00000413509 TCIRG1Q13488 830 aa10.29□□□□□ -0.76
HDAC9-207ENST00000413509 CCDC191Q8NCU4 936 aa10.29□□□□□ -0.76
HDAC9-207ENST00000413509 BCL11BQ9C0K0 894 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-207ENST00000413509 C9orf78Q9NZ63 289 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-207ENST00000413509 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 A0A0G2JS52 829 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 ATP6V1AP38606 617 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 MYT1Q01538 1121 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 RABL6Q3YEC7 729 aaPredicted RBP10.28□□□□□ -0.76
HDAC9-207ENST00000413509 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
HDAC9-207ENST00000413509 GIGYF2Q6Y7W6 1299 aaKnown RBP10.28□□□□□ -0.76
HDAC9-207ENST00000413509 KIF6Q6ZMV9 814 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 LINC00116Q8NCU8 138 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 SUCLG2Q96I99 432 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
HDAC9-207ENST00000413509 NOP58Q9Y2X3 529 aaKnown RBP10.28□□□□□ -0.76
HDAC9-207ENST00000413509 RGS3P49796 1198 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 FAM196AQ6ZSG2 479 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 KRT27Q7Z3Y8 459 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.77
HDAC9-207ENST00000413509 TUBGCP6Q96RT7 1819 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 SALL3Q9BXA9 1300 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 C4BP0C0L5 1744 aa10.27□□□□□ -0.77
HDAC9-207ENST00000413509 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
HDAC9-207ENST00000413509 C8orf34Q49A92 452 aa10.26□□□□□ -0.77
HDAC9-207ENST00000413509 HSP90AB3PQ58FF7 597 aa10.26□□□□□ -0.77
HDAC9-207ENST00000413509 ANKRD45Q5TZF3 282 aa10.26□□□□□ -0.77
HDAC9-207ENST00000413509 LNPKQ9C0E8 428 aa10.26□□□□□ -0.77
HDAC9-207ENST00000413509 BICC1Q9H694 974 aaKnown RBP10.26□□□□□ -0.77
HDAC9-207ENST00000413509 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-207ENST00000413509 LAMB2P55268 1798 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 A0A087WZG4 1122 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 SRGAP3O43295 1099 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 RAB11FIP3O75154 756 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 CAMTA2O94983 1202 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 HLFQ16534 295 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 EPHA10Q5JZY3 1008 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 ZNF34Q8IZ26 560 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 PLA2G12BQ9BX93 195 aa10.25□□□□□ -0.77
HDAC9-207ENST00000413509 RGS17Q9UGC6 210 aaPredicted RBP10.25□□□□□ -0.77
HDAC9-207ENST00000413509 COL24A1Q17RW2 1714 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms