RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 MEIOBQ8N635 442 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 RHPN1Q8TCX5 695 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 HPS1Q92902 700 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 FAM129BQ96TA1 746 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 GRIP2Q9C0E4 1043 aa7.7□□□□□ -1.18
HMGB3P31-201ENST00000413333 MZF1P28698 734 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P31-201ENST00000413333 XPCQ01831 940 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P31-201ENST00000413333 C1orf53Q5VUE5 145 aa7.69□□□□□ -1.18
HMGB3P31-201ENST00000413333 GPR152Q8TDT2 470 aa7.69□□□□□ -1.18
HMGB3P31-201ENST00000413333 TSEN34Q9BSV6 310 aaKnown RBP7.69□□□□□ -1.18
HMGB3P31-201ENST00000413333 PDGFAP04085 211 aa7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 VAMP1P23763 118 aa7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 GPC1P35052 558 aa7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 TTC16Q8NEE8 873 aa7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 WWC3Q9ULE0 1092 aa7.68□□□□□ -1.18
HMGB3P31-201ENST00000413333 UPP2O95045 317 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 RECKO95980 971 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 PCSK2P16519 638 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 USP5P45974 858 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 ATP2B2Q01814 1243 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 NBPF1Q3BBV0 1214 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 C8orf34Q49A92 452 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 LINC00528Q8N1L1 170 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 FAM161BQ96MY7 647 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 DUSP9Q99956 384 aaKnown RBP7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 PARP2Q9UGN5 583 aa7.67□□□□□ -1.18
HMGB3P31-201ENST00000413333 CAPN5O15484 640 aaPredicted RBP7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 IGHA2P01877 340 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 C6orf118Q5T5N4 469 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 BICDL1Q6ZP65 573 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 PRICKLE2Q7Z3G6 844 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 GJD3Q8N144 294 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 NUDT16Q96DE0 195 aaKnown RBP7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 SETDB2Q96T68 719 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 RNF19AQ9NV58 838 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 USP35Q9P2H5 1018 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 BCS1LQ9Y276 419 aa7.66□□□□□ -1.18
HMGB3P31-201ENST00000413333 PNMA6FA0A0J9YX94 578 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 A6NHS1 94 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 SPINT1O43278 529 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 PRPF40AO75400 957 aaKnown RBP7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 MICAL2O94851 1124 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 BMP2P12643 396 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 TATP17735 454 aaPredicted RBP7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 FGD1P98174 961 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 POU4F2Q12837 409 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 ALKBH8Q96BT7 664 aaKnown RBP7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 HSH2DQ96JZ2 352 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 BACH2Q9BYV9 841 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
HMGB3P31-201ENST00000413333 HIF1AQ16665 826 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 TRIM67Q6ZTA4 783 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 ZNF280CQ8ND82 737 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 KLRG1Q96E93 195 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 SUSD3Q96L08 255 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 GGNBP2Q9H3C7 697 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 NEUROD4Q9HD90 331 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 FAM13BQ9NYF5 915 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 ZDHHC3Q9NYG2 299 aa7.64□□□□□ -1.19
HMGB3P31-201ENST00000413333 TGFBR3LH3BV60 316 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PRR20EP86478 221 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PRR20CP86479 221 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PRR20DP86480 221 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PRR20BP86481 221 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PRR20AP86496 221 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 PSMD2Q13200 908 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 ORC1Q13415 861 aa7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 MRPL58Q14197 206 aaKnown RBP7.63□□□□□ -1.19
HMGB3P31-201ENST00000413333 SPATA31C2B4DYI2 1134 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 RHOQP17081 205 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 IDH3AP50213 366 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 ENOX2Q16206 610 aaKnown RBP7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 ARSJQ5FYB0 599 aaPredicted RBP7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 ALG1LQ6GMV1 187 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 NBPF10Q6P3W6 841 aaKnown RBP7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 PIK3R5Q8WYR1 880 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 CSRNP1Q96S65 589 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 VTI1BQ9UEU0 232 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 USP20Q9Y2K6 914 aa7.62□□□□□ -1.19
HMGB3P31-201ENST00000413333 OPLAHO14841 1288 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 SORBS3O60504 671 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 LYSMD3Q7Z3D4 306 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 TMEM87AQ8NBN3 555 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 C7orf43Q8WVR3 580 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 ANKIB1Q9P2G1 1089 aa7.61□□□□□ -1.19
HMGB3P31-201ENST00000413333 FIGNL2A6NMB9 653 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 EIF1AYO14602 144 aaKnown RBP7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 RPLP1P05386 114 aaKnown RBP7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 DAB2P98082 770 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 C9orf131Q5VYM1 1079 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 MRPL14Q6P1L8 145 aaKnown RBP7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 LRRC69Q6ZNQ3 347 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 TMC4Q7Z404 712 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 CMTR1Q8N1G2 835 aaKnown RBP7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 TIMMDC1Q9NPL8 285 aa7.6□□□□□ -1.19
HMGB3P31-201ENST00000413333 SCAMP3O14828 347 aaKnown RBP7.59□□□□□ -1.19
HMGB3P31-201ENST00000413333 NEFLP07196 543 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms