RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 PRPF40BQ6NWY9 871 aaKnown RBP25.3■■□□□ 1.64
TNRC18-204ENST00000413081 BCORQ6W2J9 1755 aa25.3■■□□□ 1.64
TNRC18-204ENST00000413081 CAMTA2O94983 1202 aa25.29■■□□□ 1.64
TNRC18-204ENST00000413081 A1BGP04217 495 aa25.29■■□□□ 1.64
TNRC18-204ENST00000413081 MASTLQ96GX5 879 aa25.29■■□□□ 1.64
TNRC18-204ENST00000413081 IQCA1LA6NCM1 817 aa25.28■■□□□ 1.64
TNRC18-204ENST00000413081 SRGNP10124 158 aa25.28■■□□□ 1.64
TNRC18-204ENST00000413081 DZIP3Q86Y13 1208 aaKnown RBP25.28■■□□□ 1.64
TNRC18-204ENST00000413081 POTEIP0CG38 1075 aa25.27■■□□□ 1.64
TNRC18-204ENST00000413081 POTEJP0CG39 1038 aa25.27■■□□□ 1.64
TNRC18-204ENST00000413081 COL3A1P02461 1466 aaPredicted RBP25.27■■□□□ 1.64
TNRC18-204ENST00000413081 BTBD11A6QL63 1104 aa25.25■■□□□ 1.63
TNRC18-204ENST00000413081 SCN4AP35499 1836 aa25.25■■□□□ 1.63
TNRC18-204ENST00000413081 PER1O15534 1290 aaPredicted RBP25.24■■□□□ 1.63
TNRC18-204ENST00000413081 CNGB1Q14028 1251 aaPredicted RBP25.24■■□□□ 1.63
TNRC18-204ENST00000413081 CCDC93Q567U6 631 aa25.24■■□□□ 1.63
TNRC18-204ENST00000413081 LDHDQ86WU2 507 aa25.24■■□□□ 1.63
TNRC18-204ENST00000413081 NBPF5PQ86XG9 351 aaPredicted RBP25.24■■□□□ 1.63
TNRC18-204ENST00000413081 CNTNAP1P78357 1384 aa25.23■■□□□ 1.63
TNRC18-204ENST00000413081 ZNF652Q9Y2D9 606 aa25.23■■□□□ 1.63
TNRC18-204ENST00000413081 CEMIPQ8WUJ3 1361 aa25.22■■□□□ 1.63
TNRC18-204ENST00000413081 L3MBTL3Q96JM7 780 aaPredicted RBP25.21■■□□□ 1.63
TNRC18-204ENST00000413081 KCNQ3O43525 872 aa25.2■■□□□ 1.62
TNRC18-204ENST00000413081 NPR1P16066 1061 aa25.2■■□□□ 1.62
TNRC18-204ENST00000413081 PIP4K2AP48426 406 aaPredicted RBP25.2■■□□□ 1.62
TNRC18-204ENST00000413081 CLEC4GQ6UXB4 293 aa25.2■■□□□ 1.62
TNRC18-204ENST00000413081 AIDAQ96BJ3 306 aa25.2■■□□□ 1.62
TNRC18-204ENST00000413081 TAF1DQ9H5J8 278 aaPredicted RBP25.2■■□□□ 1.62
TNRC18-204ENST00000413081 PASKQ96RG2 1323 aa25.19■■□□□ 1.62
TNRC18-204ENST00000413081 FOXN1O15353 648 aa25.19■■□□□ 1.62
TNRC18-204ENST00000413081 EAPPQ56P03 285 aaPredicted RBP25.19■■□□□ 1.62
TNRC18-204ENST00000413081 USP16Q9Y5T5 823 aa25.19■■□□□ 1.62
TNRC18-204ENST00000413081 FKBP4Q02790 459 aaKnown RBP eCLIP25.18■■□□□ 1.62
TNRC18-204ENST00000413081 TMEM88BA6NKF7 163 aa25.17■■□□□ 1.62
TNRC18-204ENST00000413081 PRKAR2BP31323 418 aa25.17■■□□□ 1.62
TNRC18-204ENST00000413081 C7orf43Q8WVR3 580 aa25.17■■□□□ 1.62
TNRC18-204ENST00000413081 CLEC11AQ9Y240 323 aa25.17■■□□□ 1.62
TNRC18-204ENST00000413081 NPC1L1Q9UHC9 1359 aa25.17■■□□□ 1.62
TNRC18-204ENST00000413081 TPTE2Q6XPS3 522 aa25.16■■□□□ 1.62
TNRC18-204ENST00000413081 ZNF277Q9NRM2 450 aaPredicted RBP25.16■■□□□ 1.62
TNRC18-204ENST00000413081 HACL1Q9UJ83 578 aa25.16■■□□□ 1.62
TNRC18-204ENST00000413081 ZNF541Q9H0D2 1346 aa25.15■■□□□ 1.62
TNRC18-204ENST00000413081 SNRPA1P09661 255 aaKnown RBP25.15■■□□□ 1.62
TNRC18-204ENST00000413081 RTF1Q92541 710 aaKnown RBP25.15■■□□□ 1.62
TNRC18-204ENST00000413081 PHACTR3Q96KR7 559 aa25.15■■□□□ 1.62
TNRC18-204ENST00000413081 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
TNRC18-204ENST00000413081 PRDM10Q9NQV6 1147 aa25.15■■□□□ 1.62
TNRC18-204ENST00000413081 NIP7Q9Y221 180 aaKnown RBP eCLIP25.15■■□□□ 1.62
TNRC18-204ENST00000413081 PRAMEF22A3QJZ6 481 aa25.14■■□□□ 1.62
TNRC18-204ENST00000413081 CTCFP49711 727 aaPredicted RBP25.14■■□□□ 1.62
TNRC18-204ENST00000413081 RTKN2Q8IZC4 609 aa25.14■■□□□ 1.62
TNRC18-204ENST00000413081 FAM177BA6PVY3 158 aa25.13■■□□□ 1.61
TNRC18-204ENST00000413081 EPHX2P34913 555 aa25.13■■□□□ 1.61
TNRC18-204ENST00000413081 VEGFBP49765 207 aa25.13■■□□□ 1.61
TNRC18-204ENST00000413081 RSPH6AQ9H0K4 717 aa25.13■■□□□ 1.61
TNRC18-204ENST00000413081 ITGBL1O95965 494 aaPredicted RBP25.12■■□□□ 1.61
TNRC18-204ENST00000413081 PNMA8AQ86V59 439 aaPredicted RBP25.12■■□□□ 1.61
TNRC18-204ENST00000413081 KLRG2A4D1S0 409 aaPredicted RBP25.11■■□□□ 1.61
TNRC18-204ENST00000413081 GTF2E1P29083 439 aaPredicted RBP25.11■■□□□ 1.61
TNRC18-204ENST00000413081 OLFM4Q6UX06 510 aa25.11■■□□□ 1.61
TNRC18-204ENST00000413081 NUDCQ9Y266 331 aa25.11■■□□□ 1.61
TNRC18-204ENST00000413081 RGL2O15211 777 aa25.1■■□□□ 1.61
TNRC18-204ENST00000413081 ALDH1B1P30837 517 aa25.1■■□□□ 1.61
TNRC18-204ENST00000413081 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
TNRC18-204ENST00000413081 IARSP41252 1262 aaKnown RBP25.1■■□□□ 1.61
TNRC18-204ENST00000413081 MCM10Q7L590 875 aa25.1■■□□□ 1.61
TNRC18-204ENST00000413081 ADAMTSL1Q8N6G6 1762 aa25.1■■□□□ 1.61
TNRC18-204ENST00000413081 RNF123Q5XPI4 1314 aa25.1■■□□□ 1.61
TNRC18-204ENST00000413081 SYNE4Q8N205 404 aa25.08■■□□□ 1.61
TNRC18-204ENST00000413081 NBPF26B4DH59 902 aa25.07■■□□□ 1.6
TNRC18-204ENST00000413081 NBPF10Q6P3W6 841 aaKnown RBP25.07■■□□□ 1.6
TNRC18-204ENST00000413081 CNTROBQ8N137 903 aa25.07■■□□□ 1.6
TNRC18-204ENST00000413081 NBPF15Q8N660 670 aa25.07■■□□□ 1.6
TNRC18-204ENST00000413081 JDP2Q8WYK2 163 aa25.07■■□□□ 1.6
TNRC18-204ENST00000413081 FZD9O00144 591 aa25.06■■□□□ 1.6
TNRC18-204ENST00000413081 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
TNRC18-204ENST00000413081 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.6
TNRC18-204ENST00000413081 DEFB115Q30KQ5 88 aa25.06■■□□□ 1.6
TNRC18-204ENST00000413081 MAP1SQ66K74 1059 aaPredicted RBP25.06■■□□□ 1.6
TNRC18-204ENST00000413081 GPC2Q8N158 579 aa25.06■■□□□ 1.6
TNRC18-204ENST00000413081 WBP1LQ9NX94 342 aa25.06■■□□□ 1.6
TNRC18-204ENST00000413081 LBX1P52954 281 aa25.05■■□□□ 1.6
TNRC18-204ENST00000413081 LAMB4A4D0S4 1761 aa25.05■■□□□ 1.6
TNRC18-204ENST00000413081 RASSF10A6NK89 507 aa25.04■■□□□ 1.6
TNRC18-204ENST00000413081 NYXQ9GZU5 481 aa25.04■■□□□ 1.6
TNRC18-204ENST00000413081 ABT1Q9ULW3 272 aaKnown RBP25.04■■□□□ 1.6
TNRC18-204ENST00000413081 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
TNRC18-204ENST00000413081 DCTN1Q14203 1278 aa25.03■■□□□ 1.6
TNRC18-204ENST00000413081 HLFQ16534 295 aa25.03■■□□□ 1.6
TNRC18-204ENST00000413081 PSMD1Q99460 953 aa25.03■■□□□ 1.6
TNRC18-204ENST00000413081 GJA3Q9Y6H8 435 aa25.03■■□□□ 1.6
TNRC18-204ENST00000413081 LMOD1P29536 600 aaPredicted RBP25.02■■□□□ 1.6
TNRC18-204ENST00000413081 MAP2K1Q02750 393 aaPredicted RBP25.01■■□□□ 1.59
TNRC18-204ENST00000413081 CC2D2BQ6DHV5 1058 aa25.01■■□□□ 1.59
TNRC18-204ENST00000413081 RPGRQ92834 1020 aaKnown RBP25.01■■□□□ 1.59
TNRC18-204ENST00000413081 WDR33Q9C0J8 1336 aaKnown RBP25.01■■□□□ 1.59
TNRC18-204ENST00000413081 HTATSF1O43719 755 aaKnown RBP25■■□□□ 1.59
TNRC18-204ENST00000413081 TAF7Q15545 349 aaPredicted RBP25■■□□□ 1.59
TNRC18-204ENST00000413081 NGEFQ8N5V2 710 aa25■■□□□ 1.59
TNRC18-204ENST00000413081 CRY2Q49AN0 593 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms