RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CCDC9Q9Y3X0 531 aaKnown RBP10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 SALL3Q9BXA9 1300 aa10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 PAPPAQ13219 1627 aa10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 CYP19A1P11511 503 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 MTX1Q13505 466 aa10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 VSIG10Q8N0Z9 540 aa10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 SYTL4Q96C24 671 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 C9orf78Q9NZ63 289 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 IBTKQ9P2D0 1353 aaPredicted RBP10.74□□□□□ -0.69
HMGN1P34-201ENST00000413023 UBR2Q8IWV8 1755 aa10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 H7C1W4 665 aa10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 SURF6O75683 361 aaKnown RBP10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 BMP2KLQ5H9B9 411 aa10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 PA2G4Q9UQ80 394 aaKnown RBP10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
HMGN1P34-201ENST00000413023 SRGAP3O43295 1099 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 TTC22Q5TAA0 569 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 INTS5Q6P9B9 1019 aaKnown RBP10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 TEX13AQ9BXU3 409 aaPredicted RBP10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 BICC1Q9H694 974 aaKnown RBP10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 IL1RAPL2Q9NP60 686 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 USP21Q9UK80 565 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
HMGN1P34-201ENST00000413023 RFX5P48382 616 aaPredicted RBP10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 PDE1AP54750 535 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 FOXO4P98177 505 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 ITPK1Q13572 414 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 HLFQ16534 295 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 ISCA1Q9BUE6 129 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
HMGN1P34-201ENST00000413023 N4BP2Q86UW6 1770 aaPredicted RBP10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 A0A087WZG4 1122 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 SASH1O94885 1247 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 NEXNQ0ZGT2 675 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 TCIRG1Q13488 830 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 FAM182BQ5T319 152 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 TSHZ3Q63HK5 1081 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 KLHDC4Q8TBB5 520 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 STAP2Q9UGK3 403 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 ZBTB1Q9Y2K1 713 aa10.7□□□□□ -0.7
HMGN1P34-201ENST00000413023 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 STARD3NLO95772 234 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 SDSP20132 328 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 RABL6Q3YEC7 729 aaPredicted RBP10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 TBC1D9Q6ZT07 1266 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 UBE3BQ7Z3V4 1068 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 SYNE4Q8N205 404 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 ITGB4P16144 1822 aa10.69□□□□□ -0.7
HMGN1P34-201ENST00000413023 AFF2P51816 1311 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 NWD2Q9ULI1 1742 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 ONECUT3O60422 494 aaPredicted RBP10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 KCNQ4P56696 695 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 RTL5Q5HYW3 569 aaPredicted RBP10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 TBC1D32Q96NH3 1257 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 WNK3Q9BYP7 1800 aa10.68□□□□□ -0.7
HMGN1P34-201ENST00000413023 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 ATP6V1AP38606 617 aa10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 EIF5P55010 431 aaKnown RBP10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 SIK1P57059 783 aa10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 TRIM28Q13263 835 aaKnown RBP10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 SMIM5Q71RC9 77 aa10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 CWC25Q9NXE8 425 aaPredicted RBP10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
HMGN1P34-201ENST00000413023 COL15A1P39059 1388 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 MAP3K15Q6ZN16 1313 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 A0A0G2JS52 829 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 PTPN12Q05209 780 aaKnown RBP10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 LMBR1LQ6UX01 489 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 CCDC191Q8NCU4 936 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 EAF2Q96CJ1 260 aaPredicted RBP10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 KIF1BPQ96EK5 621 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 LAMB4A4D0S4 1761 aa10.66□□□□□ -0.7
HMGN1P34-201ENST00000413023 CDC45O75419 566 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 MX1P20591 662 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 IL6STP40189 918 aaPredicted RBP10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 ARXQ96QS3 562 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 KIF2CQ99661 725 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 COPRSQ9NQ92 184 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
HMGN1P34-201ENST00000413023 GPTP24298 496 aa10.64□□□□□ -0.71
HMGN1P34-201ENST00000413023 MEX3CQ5U5Q3 659 aaKnown RBP10.64□□□□□ -0.71
HMGN1P34-201ENST00000413023 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms