RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 PARD3Q8TEW0 1356 aa11.51□□□□□ -0.57
CCDC196-203ENST00000411796 NSD3Q9BZ95 1437 aa11.51□□□□□ -0.57
CCDC196-203ENST00000411796 NUTM2BA6NNL0 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-203ENST00000411796 NUTM2EB1AL46 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-203ENST00000411796 MORC1Q86VD1 984 aa11.5□□□□□ -0.57
CCDC196-203ENST00000411796 RETREG3Q86VR2 466 aa11.5□□□□□ -0.57
CCDC196-203ENST00000411796 NUTM2AQ8IVF1 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-203ENST00000411796 CDK12Q9NYV4 1490 aaPredicted RBP11.5□□□□□ -0.57
CCDC196-203ENST00000411796 LRP6O75581 1613 aa11.49□□□□□ -0.57
CCDC196-203ENST00000411796 AHDC1Q5TGY3 1603 aaPredicted RBP11.49□□□□□ -0.57
CCDC196-203ENST00000411796 SPDYE5A6NIY4 337 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 S1PR4O95977 384 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 SLC6A16Q9GZN6 736 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 PRDM9Q9NQV7 894 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 USP19O94966 1318 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 MYBBP1AQ9BQG0 1328 aaKnown RBP11.48□□□□□ -0.57
CCDC196-203ENST00000411796 PXDNQ92626 1479 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 MYOM1P52179 1685 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 AKAP12Q02952 1782 aa11.48□□□□□ -0.57
CCDC196-203ENST00000411796 PNPLA6Q8IY17 1366 aa11.47□□□□□ -0.57
CCDC196-203ENST00000411796 GCP02774 474 aa11.47□□□□□ -0.57
CCDC196-203ENST00000411796 MSS51Q4VC12 460 aa11.47□□□□□ -0.57
CCDC196-203ENST00000411796 PPP1R18Q6NYC8 613 aa11.47□□□□□ -0.57
CCDC196-203ENST00000411796 PRR7Q8TB68 274 aa11.47□□□□□ -0.57
CCDC196-203ENST00000411796 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 CPDO75976 1380 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 SPATA31A6Q5VVP1 1343 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 PPP2R2DQ66LE6 453 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC196-203ENST00000411796 GTF3C3Q9Y5Q9 886 aa11.46□□□□□ -0.57
CCDC196-203ENST00000411796 OVOS2A0A0J9YW53 1432 aa11.45□□□□□ -0.58
CCDC196-203ENST00000411796 OVOS2Q6IE36 1432 aa11.45□□□□□ -0.58
CCDC196-203ENST00000411796 ARHGEF25Q86VW2 580 aa11.45□□□□□ -0.58
CCDC196-203ENST00000411796 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
CCDC196-203ENST00000411796 PLEKHG2Q9H7P9 1386 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 USP54Q70EL1 1684 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 PPEF1O14829 653 aaPredicted RBP11.44□□□□□ -0.58
CCDC196-203ENST00000411796 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 NME9Q86XW9 330 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 NGEFQ8N5V2 710 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 CFAP53Q96M91 514 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.44□□□□□ -0.58
CCDC196-203ENST00000411796 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
CCDC196-203ENST00000411796 MMP16P51512 607 aa11.43□□□□□ -0.58
CCDC196-203ENST00000411796 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
CCDC196-203ENST00000411796 IP6K1Q92551 441 aa11.43□□□□□ -0.58
CCDC196-203ENST00000411796 GGNBP2Q9H3C7 697 aa11.43□□□□□ -0.58
CCDC196-203ENST00000411796 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
CCDC196-203ENST00000411796 NUDCQ9Y266 331 aa11.43□□□□□ -0.58
CCDC196-203ENST00000411796 RGPD8O14715 1765 aaPredicted RBP11.43□□□□□ -0.58
CCDC196-203ENST00000411796 RTL1A6NKG5 1358 aa11.42□□□□□ -0.58
CCDC196-203ENST00000411796 A0A0G2JS52 829 aa11.42□□□□□ -0.58
CCDC196-203ENST00000411796 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
CCDC196-203ENST00000411796 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
CCDC196-203ENST00000411796 RGS12O14924 1447 aa11.42□□□□□ -0.58
CCDC196-203ENST00000411796 COL16A1Q07092 1604 aaPredicted RBP11.42□□□□□ -0.58
CCDC196-203ENST00000411796 NRKQ7Z2Y5 1582 aa11.41□□□□□ -0.58
CCDC196-203ENST00000411796 ABCC6O95255 1503 aa11.41□□□□□ -0.58
CCDC196-203ENST00000411796 JUNDP17535 347 aa11.41□□□□□ -0.58
CCDC196-203ENST00000411796 RFC5P40937 340 aa11.41□□□□□ -0.58
CCDC196-203ENST00000411796 MTHFSP49914 203 aa11.41□□□□□ -0.58
CCDC196-203ENST00000411796 SMG6Q86US8 1419 aaKnown RBP11.41□□□□□ -0.58
CCDC196-203ENST00000411796 TRPM3Q9HCF6 1732 aaPredicted RBP11.4□□□□□ -0.58
CCDC196-203ENST00000411796 SLIT3O75094 1523 aa11.4□□□□□ -0.58
CCDC196-203ENST00000411796 AFF2P51816 1311 aa11.4□□□□□ -0.58
CCDC196-203ENST00000411796 GGCXP38435 758 aa11.4□□□□□ -0.58
CCDC196-203ENST00000411796 TSC1Q92574 1164 aa11.4□□□□□ -0.58
CCDC196-203ENST00000411796 BLMP54132 1417 aaPredicted RBP11.39□□□□□ -0.59
CCDC196-203ENST00000411796 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
CCDC196-203ENST00000411796 DESI1Q6ICB0 168 aa11.39□□□□□ -0.59
CCDC196-203ENST00000411796 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
CCDC196-203ENST00000411796 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
CCDC196-203ENST00000411796 FLT4P35916 1363 aa11.39□□□□□ -0.59
CCDC196-203ENST00000411796 CTDSPL2Q05D32 466 aa11.38□□□□□ -0.59
CCDC196-203ENST00000411796 PNISRQ8TF01 805 aaKnown RBP11.38□□□□□ -0.59
CCDC196-203ENST00000411796 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
CCDC196-203ENST00000411796 SHPRHQ149N8 1683 aa11.37□□□□□ -0.59
CCDC196-203ENST00000411796 DIAPH1O60610 1272 aaKnown RBP11.37□□□□□ -0.59
CCDC196-203ENST00000411796 AMPHP49418 695 aa11.37□□□□□ -0.59
CCDC196-203ENST00000411796 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
CCDC196-203ENST00000411796 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
CCDC196-203ENST00000411796 PHRF1Q9P1Y6 1649 aaKnown RBP11.36□□□□□ -0.59
CCDC196-203ENST00000411796 ANKRD26Q9UPS8 1709 aa11.36□□□□□ -0.59
CCDC196-203ENST00000411796 AP1G2O75843 785 aa11.36□□□□□ -0.59
CCDC196-203ENST00000411796 FNBP4Q8N3X1 1017 aaPredicted RBP11.36□□□□□ -0.59
CCDC196-203ENST00000411796 ANKLE1Q8NAG6 615 aa11.36□□□□□ -0.59
CCDC196-203ENST00000411796 DDX17Q92841 729 aaKnown RBP11.36□□□□□ -0.59
CCDC196-203ENST00000411796 FCF1Q9Y324 198 aaKnown RBP11.36□□□□□ -0.59
CCDC196-203ENST00000411796 EP400Q96L91 3159 aa11.36□□□□□ -0.59
CCDC196-203ENST00000411796 HOXC9P31274 260 aa11.35□□□□□ -0.59
CCDC196-203ENST00000411796 IL13P35225 146 aa11.35□□□□□ -0.59
CCDC196-203ENST00000411796 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
CCDC196-203ENST00000411796 HELBQ8NG08 1087 aaPredicted RBP11.35□□□□□ -0.59
CCDC196-203ENST00000411796 THRAP3Q9Y2W1 955 aaKnown RBP11.35□□□□□ -0.59
CCDC196-203ENST00000411796 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
CCDC196-203ENST00000411796 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
CCDC196-203ENST00000411796 PLA2G2CQ5R387 149 aa11.34□□□□□ -0.59
CCDC196-203ENST00000411796 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms