RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 AOX1Q06278 1338 aa18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
SCAMP4-202ENST00000409472 SSFA2P28290 1259 aa18.55■□□□□ 0.56
SCAMP4-202ENST00000409472 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
SCAMP4-202ENST00000409472 KLHDC4Q8TBB5 520 aa18.55■□□□□ 0.56
SCAMP4-202ENST00000409472 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
SCAMP4-202ENST00000409472 WDR17Q8IZU2 1322 aa18.55■□□□□ 0.56
SCAMP4-202ENST00000409472 EPHA10Q5JZY3 1008 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 TOM1L2Q6ZVM7 507 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 MYD88Q99836 296 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 GZF1Q9H116 711 aaPredicted RBP18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 NEURL1BA8MQ27 555 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 DDX58O95786 925 aaKnown RBP18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 ARFGEF2Q9Y6D5 1785 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 UTYO14607 1347 aa18.54■□□□□ 0.56
SCAMP4-202ENST00000409472 RRP9O43818 475 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 CABP4P57796 275 aa18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 PKP1Q13835 747 aa18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 CIZ1Q9ULV3 898 aaPredicted RBP18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 AFDNP55196 1824 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 ZGPATQ8N5A5 531 aaKnown RBP18.53■□□□□ 0.56
SCAMP4-202ENST00000409472 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
SCAMP4-202ENST00000409472 SIL1Q9H173 461 aa18.52■□□□□ 0.55
SCAMP4-202ENST00000409472 SASH1O94885 1247 aa18.51■□□□□ 0.55
SCAMP4-202ENST00000409472 FMNL2Q96PY5 1086 aa18.51■□□□□ 0.55
SCAMP4-202ENST00000409472 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
SCAMP4-202ENST00000409472 GCKRQ14397 625 aa18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 ARXQ96QS3 562 aa18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 TLR7Q9NYK1 1049 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 TRAK2O60296 914 aa18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 HSP90AA2PQ14568 343 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 METTL22Q9BUU2 404 aaPredicted RBP18.5■□□□□ 0.55
SCAMP4-202ENST00000409472 UBR2Q8IWV8 1755 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 PTCD1O75127 700 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 NEK4P51957 841 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 USP42Q9H9J4 1324 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 ST18O60284 1047 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 NOL8Q76FK4 1167 aaKnown RBP18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
SCAMP4-202ENST00000409472 NBPF26B4DH59 902 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 HSP90AB4PQ58FF6 505 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 NBPF14Q5TI25 921 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 NBPF10Q6P3W6 841 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 NBPF15Q8N660 670 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 ZCRB1Q8TBF4 217 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 UPF3BQ9BZI7 483 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 PCDH11XQ9BZA7 1347 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 PCDH11YQ9BZA8 1340 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 KCPQ6ZWJ8 1503 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 AACSQ86V21 672 aa18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 CLASRPQ8N2M8 674 aaKnown RBP18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 EAF2Q96CJ1 260 aaPredicted RBP18.48■□□□□ 0.55
SCAMP4-202ENST00000409472 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 NEXNQ0ZGT2 675 aa18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 DDX54Q8TDD1 881 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 PAPPAQ13219 1627 aa18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 NHSL1Q5SYE7 1610 aa18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 SGSM2O43147 1006 aa18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 CWC27Q6UX04 472 aaKnown RBP18.47■□□□□ 0.55
SCAMP4-202ENST00000409472 CCDC8Q9H0W5 538 aaPredicted RBP18.46■□□□□ 0.55
SCAMP4-202ENST00000409472 DDX11L8A8MPP1 907 aa18.46■□□□□ 0.55
SCAMP4-202ENST00000409472 UBE3BQ7Z3V4 1068 aa18.46■□□□□ 0.55
SCAMP4-202ENST00000409472 CNTROBQ8N137 903 aa18.46■□□□□ 0.55
SCAMP4-202ENST00000409472 TTC41PQ6P2S7 1318 aa18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 CHAMP1Q96JM3 812 aa18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 ECHDC1Q9NTX5 307 aa18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 IL2RBP14784 551 aa18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 TTLL7Q6ZT98 887 aa18.45■□□□□ 0.54
SCAMP4-202ENST00000409472 NUP188Q5SRE5 1749 aa18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 RAD50Q92878 1312 aa18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 L1TD1Q5T7N2 865 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 TMX3Q96JJ7 454 aa18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 LSG1Q9H089 658 aaKnown RBP18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 A1BGP04217 495 aa18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 CYP2E1P05181 493 aaPredicted RBP18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 HSPA4P34932 840 aa18.44■□□□□ 0.54
SCAMP4-202ENST00000409472 TJP1Q07157 1748 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 MCCP23508 829 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 ERC1Q8IUD2 1116 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 CARD10Q9BWT7 1032 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 ZDHHC9Q9Y397 364 aa18.43■□□□□ 0.54
SCAMP4-202ENST00000409472 G3BP1Q13283 466 aaKnown RBP eCLIP18.42■□□□□ 0.54
SCAMP4-202ENST00000409472 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
SCAMP4-202ENST00000409472 RFX5P48382 616 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-202ENST00000409472 BAG4O95429 457 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 ANAPC15P60006 121 aa18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 RRAGDQ9NQL2 400 aaPredicted RBP18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 A0A087WZG4 1122 aa18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 CASP7P55210 303 aa18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 PTH1RQ03431 593 aa18.41■□□□□ 0.54
SCAMP4-202ENST00000409472 NAP1L5Q96NT1 182 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms