RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 RRP7AQ9Y3A4 280 aaKnown RBP11.33□□□□□ -0.6
VWA3B-201ENST00000409460 ANKRD26Q9UPS8 1709 aa11.33□□□□□ -0.6
VWA3B-201ENST00000409460 RBM17Q96I25 401 aaKnown RBP11.32□□□□□ -0.6
VWA3B-201ENST00000409460 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 PAXIP1Q6ZW49 1069 aaPredicted RBP11.32□□□□□ -0.6
VWA3B-201ENST00000409460 ZMYND15Q9H091 742 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 TM4SF1P30408 202 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 NMRK2Q9NPI5 230 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 TSPYL4Q9UJ04 414 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
VWA3B-201ENST00000409460 DDR1Q08345 913 aa11.32□□□□□ -0.6
VWA3B-201ENST00000409460 GLTPD2A6NH11 291 aa11.31□□□□□ -0.6
VWA3B-201ENST00000409460 PPP2R1AP30153 589 aa11.31□□□□□ -0.6
VWA3B-201ENST00000409460 PARP10Q53GL7 1025 aa11.31□□□□□ -0.6
VWA3B-201ENST00000409460 RGPD2P0DJD1 1756 aa11.31□□□□□ -0.6
VWA3B-201ENST00000409460 C21orf2O43822 256 aa11.3□□□□□ -0.6
VWA3B-201ENST00000409460 NEFLP07196 543 aa11.3□□□□□ -0.6
VWA3B-201ENST00000409460 EAPPQ56P03 285 aaPredicted RBP11.3□□□□□ -0.6
VWA3B-201ENST00000409460 NLRP3Q96P20 1036 aa11.3□□□□□ -0.6
VWA3B-201ENST00000409460 ERBB4Q15303 1308 aa11.3□□□□□ -0.6
VWA3B-201ENST00000409460 PNMA8AQ86V59 439 aaPredicted RBP11.29□□□□□ -0.6
VWA3B-201ENST00000409460 SLC4A9Q96Q91 983 aa11.29□□□□□ -0.6
VWA3B-201ENST00000409460 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
VWA3B-201ENST00000409460 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
VWA3B-201ENST00000409460 KIF3CO14782 793 aa11.29□□□□□ -0.6
VWA3B-201ENST00000409460 A1BGP04217 495 aa11.29□□□□□ -0.6
VWA3B-201ENST00000409460 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
VWA3B-201ENST00000409460 CHADLQ6NUI6 762 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 RASSF7Q02833 373 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 TBC1D9BQ66K14 1250 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 EIF2S2P20042 333 aaKnown RBP11.28□□□□□ -0.6
VWA3B-201ENST00000409460 MCM10Q7L590 875 aa11.28□□□□□ -0.6
VWA3B-201ENST00000409460 IL17REQ8NFR9 667 aa11.27□□□□□ -0.6
VWA3B-201ENST00000409460 PRPF40BQ6NWY9 871 aaKnown RBP11.27□□□□□ -0.61
VWA3B-201ENST00000409460 C4AP0C0L4 1744 aa11.27□□□□□ -0.61
VWA3B-201ENST00000409460 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
VWA3B-201ENST00000409460 DDX46Q7L014 1031 aaKnown RBP11.27□□□□□ -0.61
VWA3B-201ENST00000409460 ITGB4P16144 1822 aa11.27□□□□□ -0.61
VWA3B-201ENST00000409460 ERVV-1B6SEH8 477 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 BCL2L13Q9BXK5 485 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 BABAM1Q9NWV8 329 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 ADCY9O60503 1353 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 GJA3Q9Y6H8 435 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 FKBP4Q02790 459 aaKnown RBP eCLIP11.26□□□□□ -0.61
VWA3B-201ENST00000409460 KLRG1Q96E93 195 aa11.26□□□□□ -0.61
VWA3B-201ENST00000409460 UTP14AQ9BVJ6 771 aaKnown RBP11.26□□□□□ -0.61
VWA3B-201ENST00000409460 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
VWA3B-201ENST00000409460 MYL6BP14649 208 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 ECE1P42892 770 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 LTBP3Q9NS15 1303 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 RIPK4P57078 832 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 LDHDQ86WU2 507 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
VWA3B-201ENST00000409460 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
VWA3B-201ENST00000409460 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 ABT1Q9ULW3 272 aaKnown RBP11.24□□□□□ -0.61
VWA3B-201ENST00000409460 RNF123Q5XPI4 1314 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 EYA3Q99504 573 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 CAMTA2O94983 1202 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 NEUROD2Q15784 382 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 GLIPR1L2Q4G1C9 344 aa11.24□□□□□ -0.61
VWA3B-201ENST00000409460 TNIP1Q15025 636 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 IARSP41252 1262 aaKnown RBP11.23□□□□□ -0.61
VWA3B-201ENST00000409460 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 GPTP24298 496 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
VWA3B-201ENST00000409460 SYNE4Q8N205 404 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 SRGNP10124 158 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 STK31Q9BXU1 1019 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 TRMT112Q9UI30 125 aaKnown RBP11.22□□□□□ -0.61
VWA3B-201ENST00000409460 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
VWA3B-201ENST00000409460 KCPQ6ZWJ8 1503 aa11.21□□□□□ -0.61
VWA3B-201ENST00000409460 TAF1LQ8IZX4 1826 aa11.21□□□□□ -0.61
VWA3B-201ENST00000409460 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
VWA3B-201ENST00000409460 NEXNQ0ZGT2 675 aa11.21□□□□□ -0.61
VWA3B-201ENST00000409460 AIMP1Q12904 312 aaKnown RBP11.21□□□□□ -0.61
VWA3B-201ENST00000409460 TOGARAM1Q9Y4F4 1720 aa11.21□□□□□ -0.62
VWA3B-201ENST00000409460 TCERG1O14776 1098 aaKnown RBP11.21□□□□□ -0.62
VWA3B-201ENST00000409460 PDE4CQ08493 712 aa11.21□□□□□ -0.62
VWA3B-201ENST00000409460 RUNDC1Q96C34 613 aa11.21□□□□□ -0.62
VWA3B-201ENST00000409460 MRC1P22897 1456 aa11.21□□□□□ -0.62
VWA3B-201ENST00000409460 H7C1D1 291 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 DPP8Q6V1X1 898 aaPredicted RBP11.2□□□□□ -0.62
VWA3B-201ENST00000409460 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 DCTN1Q14203 1278 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 MYBBP1AQ9BQG0 1328 aaKnown RBP11.2□□□□□ -0.62
VWA3B-201ENST00000409460 BBOX1O75936 387 aa11.2□□□□□ -0.62
VWA3B-201ENST00000409460 EPHX2P34913 555 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms