RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 KNSTRNQ9Y448 316 aa10.52□□□□□ -0.73
LSM5-202ENST00000409292 N4BP2Q86UW6 1770 aaPredicted RBP10.52□□□□□ -0.73
LSM5-202ENST00000409292 RGL2O15211 777 aa10.51□□□□□ -0.73
LSM5-202ENST00000409292 AKAP4Q5JQC9 854 aa10.51□□□□□ -0.73
LSM5-202ENST00000409292 SULT6B1Q6IMI4 303 aa10.51□□□□□ -0.73
LSM5-202ENST00000409292 SLC4A9Q96Q91 983 aa10.51□□□□□ -0.73
LSM5-202ENST00000409292 RRAGCQ9HB90 399 aa10.51□□□□□ -0.73
LSM5-202ENST00000409292 VEGFAP15692 232 aaPredicted RBP10.5□□□□□ -0.73
LSM5-202ENST00000409292 DNAJC5GQ8N7S2 189 aa10.5□□□□□ -0.73
LSM5-202ENST00000409292 PANK3Q9H999 370 aa10.5□□□□□ -0.73
LSM5-202ENST00000409292 SRP68Q9UHB9 627 aaKnown RBP10.5□□□□□ -0.73
LSM5-202ENST00000409292 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
LSM5-202ENST00000409292 CLSPNQ9HAW4 1339 aa10.5□□□□□ -0.73
LSM5-202ENST00000409292 GOLGB1Q14789 3259 aaKnown RBP10.49□□□□□ -0.73
LSM5-202ENST00000409292 A0A087WZG4 1122 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 H0YIN7 160 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 NPHP1O15259 732 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 LMNB1P20700 586 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 CHRNA5P30532 468 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 USPL1Q5W0Q7 1092 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 TTC5Q8N0Z6 440 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 TTLL6Q8N841 843 aa10.49□□□□□ -0.73
LSM5-202ENST00000409292 KDM6AO15550 1401 aaPredicted RBP10.49□□□□□ -0.73
LSM5-202ENST00000409292 POLRMTO00411 1230 aaKnown RBP10.48□□□□□ -0.73
LSM5-202ENST00000409292 STARD3NLO95772 234 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 KCNA3P22001 575 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 DDR1Q08345 913 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 MICALL2Q8IY33 904 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 TNS4Q8IZW8 715 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 JMYQ8N9B5 988 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 MS4A4AQ96JQ5 239 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 SLC52A2Q9HAB3 445 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 NARFQ9UHQ1 456 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 ARFGEF1Q9Y6D6 1849 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
LSM5-202ENST00000409292 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
LSM5-202ENST00000409292 TM4SF1P30408 202 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 INTS5Q6P9B9 1019 aaKnown RBP10.47□□□□□ -0.73
LSM5-202ENST00000409292 C2CD5Q86YS7 1000 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 DNAJC10Q8IXB1 793 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 WDR90Q96KV7 1748 aa10.47□□□□□ -0.73
LSM5-202ENST00000409292 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
LSM5-202ENST00000409292 SERPINB2P05120 415 aa10.46□□□□□ -0.73
LSM5-202ENST00000409292 AEBP1Q8IUX7 1158 aa10.46□□□□□ -0.73
LSM5-202ENST00000409292 TEX13AQ9BXU3 409 aaPredicted RBP10.46□□□□□ -0.73
LSM5-202ENST00000409292 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.73
LSM5-202ENST00000409292 KIAA1551Q9HCM1 1747 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 TNRC6CQ9HCJ0 1690 aaKnown RBP10.45□□□□□ -0.74
LSM5-202ENST00000409292 COL15A1P39059 1388 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 CYP19A1P11511 503 aaPredicted RBP10.45□□□□□ -0.74
LSM5-202ENST00000409292 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
LSM5-202ENST00000409292 PDE6BP35913 854 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 TEFQ10587 303 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 NFIXQ14938 502 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
LSM5-202ENST00000409292 BRCA1P38398 1863 aaKnown RBP10.44□□□□□ -0.74
LSM5-202ENST00000409292 CEP350Q5VT06 3117 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 RNMTO43148 476 aaKnown RBP10.44□□□□□ -0.74
LSM5-202ENST00000409292 HSPA5P11021 654 aaKnown RBP10.44□□□□□ -0.74
LSM5-202ENST00000409292 IL13P35225 146 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 HTRA3P83110 453 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 RASSF7Q02833 373 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 SOGA3Q5TF21 947 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
LSM5-202ENST00000409292 ZNF622Q969S3 477 aaKnown RBP eCLIP10.44□□□□□ -0.749e-7■□□□□ 9.3
LSM5-202ENST00000409292 MYH14Q7Z406 1995 aaKnown RBP10.44□□□□□ -0.74
LSM5-202ENST00000409292 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
LSM5-202ENST00000409292 ZNF330Q9Y3S2 320 aaPredicted RBP10.43□□□□□ -0.74
LSM5-202ENST00000409292 DIAPH1O60610 1272 aaKnown RBP10.42□□□□□ -0.74
LSM5-202ENST00000409292 HMOX1P09601 288 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 ST5P78524 1137 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 SLC39A6Q13433 755 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 ERFEQ4G0M1 354 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
LSM5-202ENST00000409292 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 CNKSR1Q969H4 720 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 BRIP1Q9BX63 1249 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 MFRPQ9BY79 579 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 ZBTB1Q9Y2K1 713 aa10.42□□□□□ -0.74
LSM5-202ENST00000409292 IQCA1LA6NCM1 817 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 HSPA1AP0DMV8 641 aaKnown RBP10.41□□□□□ -0.74
LSM5-202ENST00000409292 HSPA1BP0DMV9 641 aaKnown RBP10.41□□□□□ -0.74
LSM5-202ENST00000409292 PRELPP51888 382 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 DOK7Q18PE1 504 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 SETDB2Q96T68 719 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 LGR6Q9HBX8 967 aa10.41□□□□□ -0.74
LSM5-202ENST00000409292 CARMIL3Q8ND23 1372 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 IL6STP40189 918 aaPredicted RBP10.4□□□□□ -0.74
LSM5-202ENST00000409292 CNBD1Q8NA66 436 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 AIDAQ96BJ3 306 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 ZNF652Q9Y2D9 606 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 TJP1Q07157 1748 aa10.4□□□□□ -0.74
LSM5-202ENST00000409292 SBF1O95248 1867 aa10.39□□□□□ -0.75
LSM5-202ENST00000409292 GNAT3A8MTJ3 354 aa10.39□□□□□ -0.75
LSM5-202ENST00000409292 U2SURPO15042 1029 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms